RNA–Protein interactions for RNA: ENST00000435560.1

AC076966.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC076966.1, Length 351 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC076966.1-201ENST00000435560 AEBP2Q6ZN18 517 aaPredicted RBP29.53■■■□□ 2.32
AC076966.1-201ENST00000435560 CHIC1Q5VXU3 224 aa27.32■■□□□ 1.96
AC076966.1-201ENST00000435560 SENP3Q9H4L4 574 aaPredicted RBP25.02■■□□□ 1.6
AC076966.1-201ENST00000435560 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
AC076966.1-201ENST00000435560 FOXD1Q16676 465 aa23.57■■□□□ 1.36
AC076966.1-201ENST00000435560 POTEDQ86YR6 584 aa22.7■■□□□ 1.22
AC076966.1-201ENST00000435560 MSH5O43196 834 aa22.06■■□□□ 1.12
AC076966.1-201ENST00000435560 PIAS4Q8N2W9 510 aaPredicted RBP21.8■■□□□ 1.08
AC076966.1-201ENST00000435560 PPP6R1Q9UPN7 881 aa21.69■■□□□ 1.06
AC076966.1-201ENST00000435560 ADRA2BP18089 450 aa21.54■■□□□ 1.04
AC076966.1-201ENST00000435560 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
AC076966.1-201ENST00000435560 MAPK8IP2Q13387 824 aaPredicted RBP20.01■□□□□ 0.79
AC076966.1-201ENST00000435560 DMRT2Q9Y5R5 561 aa19.82■□□□□ 0.76
AC076966.1-201ENST00000435560 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
AC076966.1-201ENST00000435560 CACNB1Q02641 598 aaPredicted RBP19.36■□□□□ 0.69
AC076966.1-201ENST00000435560 DCAF8L1A6NGE4 600 aa19.05■□□□□ 0.64
AC076966.1-201ENST00000435560 RNF39Q9H2S5 420 aa18.89■□□□□ 0.61
AC076966.1-201ENST00000435560 HOXD11P31277 338 aaPredicted RBP18.86■□□□□ 0.61
AC076966.1-201ENST00000435560 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
AC076966.1-201ENST00000435560 CNKSR2Q8WXI2 1034 aa18.54■□□□□ 0.56
AC076966.1-201ENST00000435560 RNF216Q9NWF9 866 aaPredicted RBP18.52■□□□□ 0.56
AC076966.1-201ENST00000435560 C1QBPQ07021 282 aaKnown RBP18.47■□□□□ 0.55
AC076966.1-201ENST00000435560 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
AC076966.1-201ENST00000435560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
AC076966.1-201ENST00000435560 NCBP3Q53F19 620 aaKnown RBP17.76■□□□□ 0.43
AC076966.1-201ENST00000435560 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
AC076966.1-201ENST00000435560 POTEHQ6S545 545 aa17.62■□□□□ 0.41
AC076966.1-201ENST00000435560 U3KPZ7 1027 aaPredicted RBP17.61■□□□□ 0.41
AC076966.1-201ENST00000435560 SPINK5Q9NQ38 1064 aaPredicted RBP17.58■□□□□ 0.4
AC076966.1-201ENST00000435560 DSG3P32926 999 aa17.53■□□□□ 0.4
AC076966.1-201ENST00000435560 CAPN15O75808 1086 aa17.45■□□□□ 0.38
AC076966.1-201ENST00000435560 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
AC076966.1-201ENST00000435560 ABCB7O75027 752 aa17.09■□□□□ 0.33
AC076966.1-201ENST00000435560 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
AC076966.1-201ENST00000435560 KCNA4P22459 653 aa16.93■□□□□ 0.3
AC076966.1-201ENST00000435560 ZNF219Q9P2Y4 722 aaPredicted RBP16.86■□□□□ 0.29
AC076966.1-201ENST00000435560 APLP2Q06481 763 aa16.72■□□□□ 0.27
AC076966.1-201ENST00000435560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.62■□□□□ 0.25
AC076966.1-201ENST00000435560 HNRNPUL2Q1KMD3 747 aaKnown RBP16.62■□□□□ 0.25
AC076966.1-201ENST00000435560 SAMD1Q6SPF0 538 aaPredicted RBP16.57■□□□□ 0.24
AC076966.1-201ENST00000435560 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
AC076966.1-201ENST00000435560 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
AC076966.1-201ENST00000435560 POLA2Q14181 598 aa16.46■□□□□ 0.23
AC076966.1-201ENST00000435560 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
AC076966.1-201ENST00000435560 SP7Q8TDD2 431 aaPredicted RBP16.23■□□□□ 0.19
AC076966.1-201ENST00000435560 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
AC076966.1-201ENST00000435560 AKT1S1Q96B36 256 aa16.11■□□□□ 0.17
AC076966.1-201ENST00000435560 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
AC076966.1-201ENST00000435560 REM2Q8IYK8 340 aaPredicted RBP16.06■□□□□ 0.16
AC076966.1-201ENST00000435560 OSCARQ8IYS5 282 aa16.02■□□□□ 0.16
AC076966.1-201ENST00000435560 PITPNM1O00562 1244 aa15.93■□□□□ 0.14
AC076966.1-201ENST00000435560 HAX1O00165 279 aa15.89■□□□□ 0.13
AC076966.1-201ENST00000435560 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
AC076966.1-201ENST00000435560 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
AC076966.1-201ENST00000435560 EVX2Q03828 476 aa15.86■□□□□ 0.13
AC076966.1-201ENST00000435560 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
AC076966.1-201ENST00000435560 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
AC076966.1-201ENST00000435560 ZBTB22O15209 634 aa15.64■□□□□ 0.09
AC076966.1-201ENST00000435560 PRKAR2AP13861 404 aaKnown RBP15.48■□□□□ 0.07
AC076966.1-201ENST00000435560 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
AC076966.1-201ENST00000435560 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
AC076966.1-201ENST00000435560 SPDYE2Q495Y8 402 aa15.43■□□□□ 0.06
AC076966.1-201ENST00000435560 CLEC11AQ9Y240 323 aa15.41■□□□□ 0.06
AC076966.1-201ENST00000435560 C19orf67A6NJJ6 358 aa15.38■□□□□ 0.05
AC076966.1-201ENST00000435560 MKRN4PQ13434 485 aaPredicted RBP15.38■□□□□ 0.05
AC076966.1-201ENST00000435560 GABBR2O75899 941 aa15.32■□□□□ 0.04
AC076966.1-201ENST00000435560 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
AC076966.1-201ENST00000435560 FBLN2P98095 1184 aa15.31■□□□□ 0.04
AC076966.1-201ENST00000435560 SPDYE1Q8NFV5 336 aaPredicted RBP15.3■□□□□ 0.04
AC076966.1-201ENST00000435560 CHADLQ6NUI6 762 aa15.29■□□□□ 0.04
AC076966.1-201ENST00000435560 SSUH2Q9Y2M2 353 aa15.25■□□□□ 0.03
AC076966.1-201ENST00000435560 LHX8Q68G74 356 aa15.23■□□□□ 0.03
AC076966.1-201ENST00000435560 ZNF692Q9BU19 519 aaPredicted RBP15.21■□□□□ 0.03
AC076966.1-201ENST00000435560 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
AC076966.1-201ENST00000435560 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
AC076966.1-201ENST00000435560 PRR29P0C7W0 189 aa15□□□□□ -0.01
AC076966.1-201ENST00000435560 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
AC076966.1-201ENST00000435560 FARP1Q9Y4F1 1045 aaPredicted RBP14.88□□□□□ -0.03
AC076966.1-201ENST00000435560 PLSCR2Q9NRY7 297 aa14.75□□□□□ -0.05
AC076966.1-201ENST00000435560 DCBLD2Q96PD2 775 aa14.68□□□□□ -0.06
AC076966.1-201ENST00000435560 ZNF579Q8NAF0 562 aaKnown RBP14.65□□□□□ -0.06
AC076966.1-201ENST00000435560 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
AC076966.1-201ENST00000435560 GALR2O43603 387 aaPredicted RBP14.63□□□□□ -0.07
AC076966.1-201ENST00000435560 POTEB2H3BUK9 544 aa14.61□□□□□ -0.07
AC076966.1-201ENST00000435560 CREBZFQ9NS37 354 aa14.61□□□□□ -0.07
AC076966.1-201ENST00000435560 CLCN6P51797 869 aa14.59□□□□□ -0.07
AC076966.1-201ENST00000435560 OTUD5Q96G74 571 aa14.59□□□□□ -0.07
AC076966.1-201ENST00000435560 PHF12Q96QT6 1004 aa14.48□□□□□ -0.09
AC076966.1-201ENST00000435560 PELP1Q8IZL8 1130 aaKnown RBP14.45□□□□□ -0.1
AC076966.1-201ENST00000435560 POTEMA6NI47 508 aa14.38□□□□□ -0.11
AC076966.1-201ENST00000435560 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
AC076966.1-201ENST00000435560 POTEJP0CG39 1038 aa14.32□□□□□ -0.12
AC076966.1-201ENST00000435560 POTEGQ6S5H5 508 aa14.32□□□□□ -0.12
AC076966.1-201ENST00000435560 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
AC076966.1-201ENST00000435560 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
AC076966.1-201ENST00000435560 MS4A3Q96HJ5 214 aa14.24□□□□□ -0.13
AC076966.1-201ENST00000435560 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
AC076966.1-201ENST00000435560 PAK3O75914 559 aaPredicted RBP14.23□□□□□ -0.13
AC076966.1-201ENST00000435560 METRNQ9UJH8 293 aa14.2□□□□□ -0.14
AC076966.1-201ENST00000435560 ATMINO43313 823 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms