RNA–Protein interactions for RNA: ENST00000427229.2

AL358394.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL358394.2, Length 3,637 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL358394.2-201ENST00000427229 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
AL358394.2-201ENST00000427229 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
AL358394.2-201ENST00000427229 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
AL358394.2-201ENST00000427229 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
AL358394.2-201ENST00000427229 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
AL358394.2-201ENST00000427229 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
AL358394.2-201ENST00000427229 ADRA2BP18089 450 aa17.07■□□□□ 0.32
AL358394.2-201ENST00000427229 KCNA4P22459 653 aa16.94■□□□□ 0.3
AL358394.2-201ENST00000427229 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
AL358394.2-201ENST00000427229 CSRNP3Q8WYN3 585 aa16.34■□□□□ 0.21
AL358394.2-201ENST00000427229 FOXD1Q16676 465 aa16.2■□□□□ 0.18
AL358394.2-201ENST00000427229 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
AL358394.2-201ENST00000427229 PPP4R3CPQ6ZMV5 832 aa15.82■□□□□ 0.12
AL358394.2-201ENST00000427229 ZBTB22O15209 634 aa15.71■□□□□ 0.11
AL358394.2-201ENST00000427229 NPM3O75607 178 aaKnown RBP15.57■□□□□ 0.08
AL358394.2-201ENST00000427229 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
AL358394.2-201ENST00000427229 RTN4Q9NQC3 1192 aaKnown RBP15.48■□□□□ 0.07
AL358394.2-201ENST00000427229 SLC24A1O60721 1099 aa15.47■□□□□ 0.07
AL358394.2-201ENST00000427229 NCBP3Q53F19 620 aaKnown RBP15.37■□□□□ 0.05
AL358394.2-201ENST00000427229 CNKSR2Q8WXI2 1034 aa14.93□□□□□ -0.02
AL358394.2-201ENST00000427229 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
AL358394.2-201ENST00000427229 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
AL358394.2-201ENST00000427229 AMER1Q5JTC6 1135 aaPredicted RBP14.91□□□□□ -0.02
AL358394.2-201ENST00000427229 FKBP8Q14318 412 aa14.74□□□□□ -0.05
AL358394.2-201ENST00000427229 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
AL358394.2-201ENST00000427229 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
AL358394.2-201ENST00000427229 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
AL358394.2-201ENST00000427229 DNAJC5BQ9UF47 199 aa14.22□□□□□ -0.13
AL358394.2-201ENST00000427229 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
AL358394.2-201ENST00000427229 PRKCSHP14314 528 aaPredicted RBP14.16□□□□□ -0.14
AL358394.2-201ENST00000427229 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
AL358394.2-201ENST00000427229 MSH5O43196 834 aa14.07□□□□□ -0.16
AL358394.2-201ENST00000427229 HOXD11P31277 338 aaPredicted RBP14.02□□□□□ -0.17
AL358394.2-201ENST00000427229 ATXN8OSP0DMR3 200 aa13.96□□□□□ -0.18
AL358394.2-201ENST00000427229 DMRT2Q9Y5R5 561 aa13.95□□□□□ -0.18
AL358394.2-201ENST00000427229 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
AL358394.2-201ENST00000427229 NISCHQ9Y2I1 1504 aa13.92□□□□□ -0.18
AL358394.2-201ENST00000427229 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
AL358394.2-201ENST00000427229 HAP1P54257 671 aaPredicted RBP13.9□□□□□ -0.18
AL358394.2-201ENST00000427229 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.21
AL358394.2-201ENST00000427229 TAOK2Q9UL54 1235 aa13.66□□□□□ -0.22
AL358394.2-201ENST00000427229 FBLN2P98095 1184 aa13.59□□□□□ -0.23
AL358394.2-201ENST00000427229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.59□□□□□ -0.23
AL358394.2-201ENST00000427229 TPRNQ4KMQ1 711 aa13.59□□□□□ -0.23
AL358394.2-201ENST00000427229 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.24
AL358394.2-201ENST00000427229 BCANQ96GW7 911 aa13.57□□□□□ -0.24
AL358394.2-201ENST00000427229 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
AL358394.2-201ENST00000427229 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
AL358394.2-201ENST00000427229 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
AL358394.2-201ENST00000427229 SPDYE4A6NLX3 237 aa13.51□□□□□ -0.25
AL358394.2-201ENST00000427229 PKD2Q13563 968 aa13.51□□□□□ -0.25
AL358394.2-201ENST00000427229 MKRN4PQ13434 485 aaPredicted RBP13.46□□□□□ -0.26
AL358394.2-201ENST00000427229 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
AL358394.2-201ENST00000427229 FBXO3Q9UK99 471 aa13.41□□□□□ -0.26
AL358394.2-201ENST00000427229 CFAP44Q96MT7 982 aa13.38□□□□□ -0.27
AL358394.2-201ENST00000427229 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
AL358394.2-201ENST00000427229 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
AL358394.2-201ENST00000427229 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
AL358394.2-201ENST00000427229 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
AL358394.2-201ENST00000427229 TSHZ2Q9NRE2 1034 aa13.24□□□□□ -0.29
AL358394.2-201ENST00000427229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
AL358394.2-201ENST00000427229 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
AL358394.2-201ENST00000427229 TIMELESSQ9UNS1 1208 aa13.2□□□□□ -0.3
AL358394.2-201ENST00000427229 PROM2Q8N271 834 aa13.19□□□□□ -0.3
AL358394.2-201ENST00000427229 RGL2O15211 777 aa13.16□□□□□ -0.3
AL358394.2-201ENST00000427229 ECM2O94769 699 aaPredicted RBP13.15□□□□□ -0.3
AL358394.2-201ENST00000427229 TULP1O00294 542 aaPredicted RBP13.13□□□□□ -0.31
AL358394.2-201ENST00000427229 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
AL358394.2-201ENST00000427229 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
AL358394.2-201ENST00000427229 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.12□□□□□ -0.31
AL358394.2-201ENST00000427229 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
AL358394.2-201ENST00000427229 POLA2Q14181 598 aa13.07□□□□□ -0.32
AL358394.2-201ENST00000427229 BBXQ8WY36 941 aaPredicted RBP13.05□□□□□ -0.32
AL358394.2-201ENST00000427229 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
AL358394.2-201ENST00000427229 SPRYD3Q8NCJ5 442 aa12.97□□□□□ -0.33
AL358394.2-201ENST00000427229 SPOCK2Q92563 424 aa12.93□□□□□ -0.34
AL358394.2-201ENST00000427229 ABCB7O75027 752 aa12.89□□□□□ -0.35
AL358394.2-201ENST00000427229 PLCD3Q8N3E9 789 aa12.86□□□□□ -0.35
AL358394.2-201ENST00000427229 CIZ1Q9ULV3 898 aaPredicted RBP12.86□□□□□ -0.35
AL358394.2-201ENST00000427229 NBR1Q14596 966 aa12.85□□□□□ -0.35
AL358394.2-201ENST00000427229 CAPN15O75808 1086 aa12.82□□□□□ -0.36
AL358394.2-201ENST00000427229 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
AL358394.2-201ENST00000427229 MIER1Q8N108 512 aa12.77□□□□□ -0.37
AL358394.2-201ENST00000427229 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
AL358394.2-201ENST00000427229 NKX1-1Q15270 411 aaPredicted RBP12.68□□□□□ -0.38
AL358394.2-201ENST00000427229 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
AL358394.2-201ENST00000427229 OSCARQ8IYS5 282 aa12.66□□□□□ -0.38
AL358394.2-201ENST00000427229 APLP2Q06481 763 aa12.65□□□□□ -0.38
AL358394.2-201ENST00000427229 PABPN1Q86U42 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
AL358394.2-201ENST00000427229 DNAJC5Q9H3Z4 198 aa12.57□□□□□ -0.4
AL358394.2-201ENST00000427229 SHROOM4Q9ULL8 1493 aa12.56□□□□□ -0.4
AL358394.2-201ENST00000427229 TMEM132AQ24JP5 1023 aa12.53□□□□□ -0.4
AL358394.2-201ENST00000427229 DAXXQ9UER7 740 aaPredicted RBP12.51□□□□□ -0.41
AL358394.2-201ENST00000427229 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
AL358394.2-201ENST00000427229 GTPBP6O43824 516 aaPredicted RBP12.49□□□□□ -0.41
AL358394.2-201ENST00000427229 C14orf37Q86TY3 774 aa12.48□□□□□ -0.41
AL358394.2-201ENST00000427229 SUPT5HO00267 1087 aaKnown RBP12.47□□□□□ -0.41
AL358394.2-201ENST00000427229 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
AL358394.2-201ENST00000427229 TRIM41Q8WV44 630 aa12.44□□□□□ -0.42
AL358394.2-201ENST00000427229 ARXQ96QS3 562 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms