RNA–Protein interactions for RNA: ENST00000518178.1

AC087855.1-201, humanhuman

TSL 3 BASIC

Gene AC087855.1, Length 430 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087855.1-201ENST00000518178 AEBP2Q6ZN18 517 aaPredicted RBP27.31■■□□□ 1.96
AC087855.1-201ENST00000518178 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
AC087855.1-201ENST00000518178 SENP3Q9H4L4 574 aaPredicted RBP23.15■■□□□ 1.3
AC087855.1-201ENST00000518178 PHF23Q9BUL5 403 aaPredicted RBP23.14■■□□□ 1.29
AC087855.1-201ENST00000518178 FOXD1Q16676 465 aa21.58■■□□□ 1.05
AC087855.1-201ENST00000518178 PLPPR3Q6T4P5 718 aa21.17■□□□□ 0.98
AC087855.1-201ENST00000518178 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
AC087855.1-201ENST00000518178 ADRA2BP18089 450 aa20.45■□□□□ 0.86
AC087855.1-201ENST00000518178 PIAS4Q8N2W9 510 aaPredicted RBP20.21■□□□□ 0.83
AC087855.1-201ENST00000518178 MSH5O43196 834 aa19.97■□□□□ 0.79
AC087855.1-201ENST00000518178 POTEDQ86YR6 584 aa18.82■□□□□ 0.6
AC087855.1-201ENST00000518178 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
AC087855.1-201ENST00000518178 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
AC087855.1-201ENST00000518178 PPP4R3CPQ6ZMV5 832 aa18.63■□□□□ 0.57
AC087855.1-201ENST00000518178 DMRT2Q9Y5R5 561 aa18.46■□□□□ 0.55
AC087855.1-201ENST00000518178 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
AC087855.1-201ENST00000518178 NCBP3Q53F19 620 aaKnown RBP17.98■□□□□ 0.47
AC087855.1-201ENST00000518178 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
AC087855.1-201ENST00000518178 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
AC087855.1-201ENST00000518178 KCNA4P22459 653 aa17.83■□□□□ 0.44
AC087855.1-201ENST00000518178 NPM3O75607 178 aaKnown RBP17.8■□□□□ 0.44
AC087855.1-201ENST00000518178 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
AC087855.1-201ENST00000518178 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
AC087855.1-201ENST00000518178 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
AC087855.1-201ENST00000518178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.32
AC087855.1-201ENST00000518178 SLC4A2P04920 1241 aa16.92■□□□□ 0.3
AC087855.1-201ENST00000518178 SLC4A1APQ9BWU0 796 aaKnown RBP16.88■□□□□ 0.29
AC087855.1-201ENST00000518178 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
AC087855.1-201ENST00000518178 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
AC087855.1-201ENST00000518178 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
AC087855.1-201ENST00000518178 FOXD4L1Q9NU39 408 aa16.48■□□□□ 0.23
AC087855.1-201ENST00000518178 ZBTB22O15209 634 aa16.45■□□□□ 0.22
AC087855.1-201ENST00000518178 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
AC087855.1-201ENST00000518178 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
AC087855.1-201ENST00000518178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.38■□□□□ 0.21
AC087855.1-201ENST00000518178 HNRNPUL2Q1KMD3 747 aaKnown RBP16.38■□□□□ 0.21
AC087855.1-201ENST00000518178 SAMD1Q6SPF0 538 aaPredicted RBP16.33■□□□□ 0.2
AC087855.1-201ENST00000518178 CAPN15O75808 1086 aa16.3■□□□□ 0.2
AC087855.1-201ENST00000518178 APLP2Q06481 763 aa16.26■□□□□ 0.19
AC087855.1-201ENST00000518178 DSG3P32926 999 aa16.18■□□□□ 0.18
AC087855.1-201ENST00000518178 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
AC087855.1-201ENST00000518178 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
AC087855.1-201ENST00000518178 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
AC087855.1-201ENST00000518178 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
AC087855.1-201ENST00000518178 EHMT2Q96KQ7 1210 aa16■□□□□ 0.15
AC087855.1-201ENST00000518178 ABCB7O75027 752 aa15.99■□□□□ 0.15
AC087855.1-201ENST00000518178 ATXN8OSP0DMR3 200 aa15.94■□□□□ 0.14
AC087855.1-201ENST00000518178 POLA2Q14181 598 aa15.84■□□□□ 0.13
AC087855.1-201ENST00000518178 ZBTB12Q9Y330 459 aaPredicted RBP15.52■□□□□ 0.08
AC087855.1-201ENST00000518178 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
AC087855.1-201ENST00000518178 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
AC087855.1-201ENST00000518178 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
AC087855.1-201ENST00000518178 FBLN2P98095 1184 aa15.3■□□□□ 0.04
AC087855.1-201ENST00000518178 AKT1S1Q96B36 256 aa15.12■□□□□ 0.01
AC087855.1-201ENST00000518178 SPDYE2BA6NHP3 402 aa15.1■□□□□ 0.01
AC087855.1-201ENST00000518178 SPDYE6P0CI01 402 aa15.1■□□□□ 0.01
AC087855.1-201ENST00000518178 SPDYE2Q495Y8 402 aa15.1■□□□□ 0.01
AC087855.1-201ENST00000518178 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
AC087855.1-201ENST00000518178 SSUH2Q9Y2M2 353 aa14.99□□□□□ -0.01
AC087855.1-201ENST00000518178 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
AC087855.1-201ENST00000518178 CHRDL2Q6WN34 429 aa14.89□□□□□ -0.03
AC087855.1-201ENST00000518178 PITPNM1O00562 1244 aa14.84□□□□□ -0.03
AC087855.1-201ENST00000518178 POTEHQ6S545 545 aa14.81□□□□□ -0.04
AC087855.1-201ENST00000518178 SPDYE4A6NLX3 237 aa14.78□□□□□ -0.04
AC087855.1-201ENST00000518178 PABPN1Q86U42 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
AC087855.1-201ENST00000518178 SPDYE1Q8NFV5 336 aaPredicted RBP14.72□□□□□ -0.05
AC087855.1-201ENST00000518178 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.07
AC087855.1-201ENST00000518178 PIP4P2Q8N4L2 257 aa14.64□□□□□ -0.07
AC087855.1-201ENST00000518178 CLEC11AQ9Y240 323 aa14.64□□□□□ -0.07
AC087855.1-201ENST00000518178 PROM2Q8N271 834 aa14.57□□□□□ -0.08
AC087855.1-201ENST00000518178 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
AC087855.1-201ENST00000518178 FKBP8Q14318 412 aa14.47□□□□□ -0.09
AC087855.1-201ENST00000518178 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
AC087855.1-201ENST00000518178 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
AC087855.1-201ENST00000518178 CHADLQ6NUI6 762 aa14.37□□□□□ -0.11
AC087855.1-201ENST00000518178 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
AC087855.1-201ENST00000518178 HAX1O00165 279 aa14.21□□□□□ -0.13
AC087855.1-201ENST00000518178 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
AC087855.1-201ENST00000518178 EVX2Q03828 476 aa14.16□□□□□ -0.14
AC087855.1-201ENST00000518178 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
AC087855.1-201ENST00000518178 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
AC087855.1-201ENST00000518178 SP7Q8TDD2 431 aaPredicted RBP14.08□□□□□ -0.16
AC087855.1-201ENST00000518178 MIER1Q8N108 512 aa14.02□□□□□ -0.17
AC087855.1-201ENST00000518178 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
AC087855.1-201ENST00000518178 CD44P16070 742 aaKnown RBP14□□□□□ -0.17
AC087855.1-201ENST00000518178 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
AC087855.1-201ENST00000518178 PLCD3Q8N3E9 789 aa13.95□□□□□ -0.18
AC087855.1-201ENST00000518178 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
AC087855.1-201ENST00000518178 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
AC087855.1-201ENST00000518178 ZRANB1Q9UGI0 708 aa13.86□□□□□ -0.19
AC087855.1-201ENST00000518178 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
AC087855.1-201ENST00000518178 GABBR2O75899 941 aa13.82□□□□□ -0.2
AC087855.1-201ENST00000518178 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
AC087855.1-201ENST00000518178 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
AC087855.1-201ENST00000518178 RASEFQ8IZ41 740 aa13.78□□□□□ -0.2
AC087855.1-201ENST00000518178 NUBP1P53384 320 aa13.77□□□□□ -0.21
AC087855.1-201ENST00000518178 TSPYL2Q9H2G4 693 aaPredicted RBP13.74□□□□□ -0.21
AC087855.1-201ENST00000518178 PHF12Q96QT6 1004 aa13.73□□□□□ -0.21
AC087855.1-201ENST00000518178 CLCN6P51797 869 aa13.71□□□□□ -0.21
AC087855.1-201ENST00000518178 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms