Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LRCH3Q96II8 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 TROVE2-204ENST00000367445 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
LRCH3Q96II8 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.96□□□□□ -0.98
LRCH3Q96II8 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 DOCK1-206ENST00000623213 5761 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 OR10AB1P-202ENST00000641219 1686 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC103591.2-201ENST00000265259 766 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 OR1F1-201ENST00000304646 942 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 OR10T2-201ENST00000334438 945 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 RNU6-660P-201ENST00000364566 109 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AL391422.1-201ENST00000402155 436 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC009319.1-201ENST00000411493 754 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 TAF13P2-201ENST00000416876 286 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 RPL17P17-201ENST00000419491 557 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 RPSAP1-201ENST00000421328 880 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 GAPDHP55-201ENST00000423136 803 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 RPSAP49-201ENST00000445182 886 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 AL627224.1-201ENST00000448334 444 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 AL591363.1-201ENST00000450091 483 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC022364.2-201ENST00000457963 554 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC013787.1-201ENST00000460165 307 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 SUMO1P1-201ENST00000497904 306 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC113355.1-201ENST00000510512 491 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 MTND1P35-201ENST00000526739 508 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 NACA-211ENST00000548563 827 ntTSL 5 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC091147.1-201ENST00000583290 510 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AL078623.1-201ENST00000602702 907 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 OR8G7P-201ENST00000616658 848 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC021106.3-201ENST00000623925 531 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 AF001550.2-201ENST00000636643 217 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 MIR3662-201ENST00000637030 95 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AL121936.2-201ENST00000641935 662 ntBASIC8.95□□□□□ -0.98
LRCH3Q96II8 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 TCF4-226ENST00000565018 2357 ntTSL 5 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.95□□□□□ -0.98
LRCH3Q96II8 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
LRCH3Q96II8 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AL353588.1-201ENST00000505802 3513 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 IFT122-201ENST00000296266 4151 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 LINC02239-201ENST00000504339 2290 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 TMEM108-AS1-202ENST00000505721 2427 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 CUBNP1-201ENST00000412710 1790 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 XRCC6P1-201ENST00000420392 1805 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC012409.5-201ENST00000624746 3424 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 SBNO1-203ENST00000602398 4313 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC092646.2-201ENST00000431242 2095 ntBASIC8.94□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms