RNA–Protein interactions for RNA: ENST00000543558.1

LINC02460-201, Transcript of long intergenic non-protein coding RNA 2460, humanhuman

TSL 4 BASIC

Gene LINC02460, Length 536 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02460-201ENST00000543558 AEBP2Q6ZN18 517 aaPredicted RBP22.7■■□□□ 1.22
LINC02460-201ENST00000543558 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
LINC02460-201ENST00000543558 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
LINC02460-201ENST00000543558 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
LINC02460-201ENST00000543558 FOXD1Q16676 465 aa18.02■□□□□ 0.48
LINC02460-201ENST00000543558 PLPPR3Q6T4P5 718 aa17.13■□□□□ 0.33
LINC02460-201ENST00000543558 PPP6R1Q9UPN7 881 aa16.9■□□□□ 0.3
LINC02460-201ENST00000543558 ADRA2BP18089 450 aa16.81■□□□□ 0.28
LINC02460-201ENST00000543558 PIAS4Q8N2W9 510 aaPredicted RBP16.8■□□□□ 0.28
LINC02460-201ENST00000543558 MSH5O43196 834 aa16.78■□□□□ 0.28
LINC02460-201ENST00000543558 POTEDQ86YR6 584 aa16.45■□□□□ 0.22
LINC02460-201ENST00000543558 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
LINC02460-201ENST00000543558 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
LINC02460-201ENST00000543558 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
LINC02460-201ENST00000543558 PPP4R3CPQ6ZMV5 832 aa15.05■□□□□ -0
LINC02460-201ENST00000543558 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
LINC02460-201ENST00000543558 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
LINC02460-201ENST00000543558 DCAF8L1A6NGE4 600 aa14.67□□□□□ -0.06
LINC02460-201ENST00000543558 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
LINC02460-201ENST00000543558 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
LINC02460-201ENST00000543558 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
LINC02460-201ENST00000543558 RNF39Q9H2S5 420 aa14.37□□□□□ -0.11
LINC02460-201ENST00000543558 NPM3O75607 178 aaKnown RBP14.28□□□□□ -0.12
LINC02460-201ENST00000543558 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
LINC02460-201ENST00000543558 C1QBPQ07021 282 aaKnown RBP14.11□□□□□ -0.15
LINC02460-201ENST00000543558 KCNA4P22459 653 aa14.03□□□□□ -0.16
LINC02460-201ENST00000543558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
LINC02460-201ENST00000543558 U3KPZ7 1027 aaPredicted RBP13.77□□□□□ -0.21
LINC02460-201ENST00000543558 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
LINC02460-201ENST00000543558 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
LINC02460-201ENST00000543558 CAPN15O75808 1086 aa13.52□□□□□ -0.25
LINC02460-201ENST00000543558 DSG3P32926 999 aa13.47□□□□□ -0.25
LINC02460-201ENST00000543558 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
LINC02460-201ENST00000543558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.27□□□□□ -0.29
LINC02460-201ENST00000543558 HNRNPUL2Q1KMD3 747 aaKnown RBP13.27□□□□□ -0.29
LINC02460-201ENST00000543558 APLP2Q06481 763 aa13.25□□□□□ -0.29
LINC02460-201ENST00000543558 ABCB7O75027 752 aa13.24□□□□□ -0.29
LINC02460-201ENST00000543558 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
LINC02460-201ENST00000543558 SAMD1Q6SPF0 538 aaPredicted RBP13.22□□□□□ -0.29
LINC02460-201ENST00000543558 SLC4A1APQ9BWU0 796 aaKnown RBP13.2□□□□□ -0.3
LINC02460-201ENST00000543558 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
LINC02460-201ENST00000543558 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
LINC02460-201ENST00000543558 POLA2Q14181 598 aa12.96□□□□□ -0.33
LINC02460-201ENST00000543558 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
LINC02460-201ENST00000543558 ZBTB22O15209 634 aa12.93□□□□□ -0.34
LINC02460-201ENST00000543558 POTEHQ6S545 545 aa12.88□□□□□ -0.35
LINC02460-201ENST00000543558 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
LINC02460-201ENST00000543558 ATXN8OSP0DMR3 200 aa12.6□□□□□ -0.39
LINC02460-201ENST00000543558 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
LINC02460-201ENST00000543558 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
LINC02460-201ENST00000543558 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
LINC02460-201ENST00000543558 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
LINC02460-201ENST00000543558 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
LINC02460-201ENST00000543558 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
LINC02460-201ENST00000543558 MKRN4PQ13434 485 aaPredicted RBP12.34□□□□□ -0.43
LINC02460-201ENST00000543558 FBLN2P98095 1184 aa12.32□□□□□ -0.44
LINC02460-201ENST00000543558 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
LINC02460-201ENST00000543558 PITPNM1O00562 1244 aa12.3□□□□□ -0.44
LINC02460-201ENST00000543558 PIP4P2Q8N4L2 257 aa12.27□□□□□ -0.45
LINC02460-201ENST00000543558 SPDYE2BA6NHP3 402 aa12.26□□□□□ -0.45
LINC02460-201ENST00000543558 SPDYE6P0CI01 402 aa12.26□□□□□ -0.45
LINC02460-201ENST00000543558 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
LINC02460-201ENST00000543558 FXR2P51116 673 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC02460-201ENST00000543558 ZNF692Q9BU19 519 aaPredicted RBP12.14□□□□□ -0.47
LINC02460-201ENST00000543558 SSUH2Q9Y2M2 353 aa12.13□□□□□ -0.47
LINC02460-201ENST00000543558 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
LINC02460-201ENST00000543558 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
LINC02460-201ENST00000543558 SPDYE1Q8NFV5 336 aaPredicted RBP12.04□□□□□ -0.48
LINC02460-201ENST00000543558 HAX1O00165 279 aa12.02□□□□□ -0.49
LINC02460-201ENST00000543558 PRKAR2AP13861 404 aaKnown RBP11.97□□□□□ -0.49
LINC02460-201ENST00000543558 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC02460-201ENST00000543558 EVX2Q03828 476 aa11.96□□□□□ -0.49
LINC02460-201ENST00000543558 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
LINC02460-201ENST00000543558 PRR29P0C7W0 189 aa11.84□□□□□ -0.51
LINC02460-201ENST00000543558 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
LINC02460-201ENST00000543558 SPDYE4A6NLX3 237 aa11.7□□□□□ -0.54
LINC02460-201ENST00000543558 FARP1Q9Y4F1 1045 aaPredicted RBP11.66□□□□□ -0.54
LINC02460-201ENST00000543558 GABBR2O75899 941 aa11.63□□□□□ -0.55
LINC02460-201ENST00000543558 CREBZFQ9NS37 354 aa11.6□□□□□ -0.55
LINC02460-201ENST00000543558 CD44P16070 742 aaKnown RBP11.58□□□□□ -0.56
LINC02460-201ENST00000543558 STAG3Q9UJ98 1225 aa11.58□□□□□ -0.56
LINC02460-201ENST00000543558 PROM2Q8N271 834 aa11.44□□□□□ -0.58
LINC02460-201ENST00000543558 POTEIP0CG38 1075 aa11.43□□□□□ -0.58
LINC02460-201ENST00000543558 ZRANB1Q9UGI0 708 aa11.43□□□□□ -0.58
LINC02460-201ENST00000543558 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
LINC02460-201ENST00000543558 ZNF579Q8NAF0 562 aaKnown RBP11.4□□□□□ -0.58
LINC02460-201ENST00000543558 CLCN6P51797 869 aa11.34□□□□□ -0.59
LINC02460-201ENST00000543558 LHX8Q68G74 356 aa11.32□□□□□ -0.6
LINC02460-201ENST00000543558 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
LINC02460-201ENST00000543558 NPM1P06748 294 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC02460-201ENST00000543558 PHF12Q96QT6 1004 aa11.29□□□□□ -0.6
LINC02460-201ENST00000543558 DCBLD2Q96PD2 775 aa11.27□□□□□ -0.61
LINC02460-201ENST00000543558 PAK3O75914 559 aaPredicted RBP11.26□□□□□ -0.61
LINC02460-201ENST00000543558 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
LINC02460-201ENST00000543558 MIER1Q8N108 512 aa11.16□□□□□ -0.62
LINC02460-201ENST00000543558 FKBP8Q14318 412 aa11.14□□□□□ -0.63
LINC02460-201ENST00000543558 MS4A3Q96HJ5 214 aa11.13□□□□□ -0.63
LINC02460-201ENST00000543558 CCDC61Q9Y6R9 512 aa11.12□□□□□ -0.63
LINC02460-201ENST00000543558 PELP1Q8IZL8 1130 aaKnown RBP11.11□□□□□ -0.63
LINC02460-201ENST00000543558 RASEFQ8IZ41 740 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 221.6 ms