RNA–Protein interactions for RNA: ENST00000619735.4

TFIP11-217, Transcript of tuftelin interacting protein 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFIP11, Length 3,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFIP11-217ENST00000619735 NISCHQ9Y2I1 1504 aa17.88■□□□□ 0.45
TFIP11-217ENST00000619735 DCAF8L2P0C7V8 631 aa16.61■□□□□ 0.25
TFIP11-217ENST00000619735 ABCC9O60706 1549 aa15.95■□□□□ 0.14
TFIP11-217ENST00000619735 SHROOM4Q9ULL8 1493 aa15.58■□□□□ 0.08
TFIP11-217ENST00000619735 PABPN1Q86U42 306 aaKnown RBP eCLIP15.38■□□□□ 0.05
TFIP11-217ENST00000619735 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
TFIP11-217ENST00000619735 SUPT5HO00267 1087 aaKnown RBP14.96□□□□□ -0.01
TFIP11-217ENST00000619735 ZCCHC6Q5VYS8 1495 aaKnown RBP14.8□□□□□ -0.04
TFIP11-217ENST00000619735 SCRIBQ14160 1630 aa14.77□□□□□ -0.04
TFIP11-217ENST00000619735 RB1CC1Q8TDY2 1594 aa14.71□□□□□ -0.06
TFIP11-217ENST00000619735 NACADO15069 1562 aa14.58□□□□□ -0.08
TFIP11-217ENST00000619735 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
TFIP11-217ENST00000619735 CHIC1Q5VXU3 224 aa14.29□□□□□ -0.12
TFIP11-217ENST00000619735 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
TFIP11-217ENST00000619735 EHMT2Q96KQ7 1210 aa14.27□□□□□ -0.12
TFIP11-217ENST00000619735 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
TFIP11-217ENST00000619735 MYO15BQ96JP2 1530 aa14.14□□□□□ -0.15
TFIP11-217ENST00000619735 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
TFIP11-217ENST00000619735 PCGF6Q9BYE7 350 aa14.1□□□□□ -0.15
TFIP11-217ENST00000619735 HRCP23327 699 aa14.09□□□□□ -0.15
TFIP11-217ENST00000619735 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
TFIP11-217ENST00000619735 UNC13AQ9UPW8 1703 aa13.99□□□□□ -0.17
TFIP11-217ENST00000619735 MROH2BQ7Z745 1585 aa13.99□□□□□ -0.17
TFIP11-217ENST00000619735 RSF1Q96T23 1441 aaPredicted RBP13.95□□□□□ -0.18
TFIP11-217ENST00000619735 EIF4G1Q04637 1599 aaKnown RBP13.94□□□□□ -0.18
TFIP11-217ENST00000619735 LOC105371045A0A1W2PR82 267 aa13.92□□□□□ -0.18
TFIP11-217ENST00000619735 RANGAP1P46060 587 aaPredicted RBP13.9□□□□□ -0.18
TFIP11-217ENST00000619735 BAZ1BQ9UIG0 1483 aaKnown RBP13.89□□□□□ -0.19
TFIP11-217ENST00000619735 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
TFIP11-217ENST00000619735 ATAD2BQ9ULI0 1458 aa13.83□□□□□ -0.2
TFIP11-217ENST00000619735 BAZ1AQ9NRL2 1556 aaPredicted RBP13.82□□□□□ -0.2
TFIP11-217ENST00000619735 FBLN2P98095 1184 aa13.8□□□□□ -0.2
TFIP11-217ENST00000619735 PPARGC1BQ86YN6 1023 aaKnown RBP13.8□□□□□ -0.2
TFIP11-217ENST00000619735 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
TFIP11-217ENST00000619735 TTBK1Q5TCY1 1321 aaPredicted RBP13.79□□□□□ -0.2
TFIP11-217ENST00000619735 WIZO95785 1651 aa13.79□□□□□ -0.2
TFIP11-217ENST00000619735 ERCC6Q03468 1493 aa13.77□□□□□ -0.21
TFIP11-217ENST00000619735 TRIM26Q12899 539 aaPredicted RBP13.75□□□□□ -0.21
TFIP11-217ENST00000619735 SMARCA4P51532 1647 aa13.73□□□□□ -0.21
TFIP11-217ENST00000619735 NESP48681 1621 aa13.72□□□□□ -0.21
TFIP11-217ENST00000619735 SMARCA2P51531 1590 aa13.64□□□□□ -0.23
TFIP11-217ENST00000619735 NCAPD3P42695 1498 aa13.62□□□□□ -0.23
TFIP11-217ENST00000619735 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
TFIP11-217ENST00000619735 ZEB1P37275 1124 aaPredicted RBP13.57□□□□□ -0.24
TFIP11-217ENST00000619735 CADPSQ9ULU8 1353 aa13.56□□□□□ -0.24
TFIP11-217ENST00000619735 ATP1B4Q9UN42 357 aaPredicted RBP13.48□□□□□ -0.25
TFIP11-217ENST00000619735 UBTFP17480 764 aaKnown RBP13.48□□□□□ -0.25
TFIP11-217ENST00000619735 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
TFIP11-217ENST00000619735 TOP2AP11388 1531 aaKnown RBP13.43□□□□□ -0.26
TFIP11-217ENST00000619735 TDRD9Q8NDG6 1382 aaKnown RBP13.42□□□□□ -0.26
TFIP11-217ENST00000619735 FANCD2Q9BXW9 1451 aa13.41□□□□□ -0.26
TFIP11-217ENST00000619735 ARID3CA6NKF2 412 aa13.4□□□□□ -0.26
TFIP11-217ENST00000619735 P3H3Q8IVL6 736 aa13.38□□□□□ -0.27
TFIP11-217ENST00000619735 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
TFIP11-217ENST00000619735 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
TFIP11-217ENST00000619735 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
TFIP11-217ENST00000619735 HMGXB3Q12766 1538 aa13.33□□□□□ -0.28
TFIP11-217ENST00000619735 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
TFIP11-217ENST00000619735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
TFIP11-217ENST00000619735 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
TFIP11-217ENST00000619735 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.28
TFIP11-217ENST00000619735 CCER1Q8TC90 406 aaPredicted RBP13.26□□□□□ -0.29
TFIP11-217ENST00000619735 CFTRP13569 1480 aa13.26□□□□□ -0.29
TFIP11-217ENST00000619735 SOGA1O94964 1423 aa13.26□□□□□ -0.29
TFIP11-217ENST00000619735 AQRO60306 1485 aaKnown RBP eCLIP13.24□□□□□ -0.29
TFIP11-217ENST00000619735 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
TFIP11-217ENST00000619735 PEG3Q9GZU2 1588 aa13.18□□□□□ -0.3
TFIP11-217ENST00000619735 CUX2O14529 1486 aa13.18□□□□□ -0.3
TFIP11-217ENST00000619735 CYB5RLQ6IPT4 315 aa13.16□□□□□ -0.3
TFIP11-217ENST00000619735 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
TFIP11-217ENST00000619735 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
TFIP11-217ENST00000619735 FGD5Q6ZNL6 1462 aa13.12□□□□□ -0.31
TFIP11-217ENST00000619735 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
TFIP11-217ENST00000619735 ZNF608Q9ULD9 1512 aaPredicted RBP13.11□□□□□ -0.31
TFIP11-217ENST00000619735 LAMC3Q9Y6N6 1575 aa13.1□□□□□ -0.31
TFIP11-217ENST00000619735 RUSC2Q8N2Y8 1516 aa13.09□□□□□ -0.31
TFIP11-217ENST00000619735 TOPBP1Q92547 1522 aa13.08□□□□□ -0.31
TFIP11-217ENST00000619735 TRHP20396 242 aaPredicted RBP13.07□□□□□ -0.32
TFIP11-217ENST00000619735 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
TFIP11-217ENST00000619735 POLA1P09884 1462 aaPredicted RBP13.05□□□□□ -0.32
TFIP11-217ENST00000619735 KIF21AQ7Z4S6 1674 aa13.04□□□□□ -0.32
TFIP11-217ENST00000619735 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
TFIP11-217ENST00000619735 CUX1P39880 1505 aa13.03□□□□□ -0.32
TFIP11-217ENST00000619735 CEP162Q5TB80 1403 aa13.02□□□□□ -0.32
TFIP11-217ENST00000619735 KIF27Q86VH2 1401 aa13.01□□□□□ -0.33
TFIP11-217ENST00000619735 DIEXFQ68CQ4 756 aaKnown RBP13.01□□□□□ -0.33
TFIP11-217ENST00000619735 APLP2Q06481 763 aa13□□□□□ -0.33
TFIP11-217ENST00000619735 CARMIL1Q5VZK9 1371 aa12.99□□□□□ -0.33
TFIP11-217ENST00000619735 CENPBP07199 599 aaPredicted RBP12.99□□□□□ -0.33
TFIP11-217ENST00000619735 TNIKQ9UKE5 1360 aa12.98□□□□□ -0.33
TFIP11-217ENST00000619735 KCNH8Q96L42 1107 aa12.98□□□□□ -0.33
TFIP11-217ENST00000619735 SYNJ1O43426 1573 aa12.97□□□□□ -0.33
TFIP11-217ENST00000619735 EEA1Q15075 1411 aa12.97□□□□□ -0.33
TFIP11-217ENST00000619735 GAPVD1Q14C86 1478 aa12.96□□□□□ -0.34
TFIP11-217ENST00000619735 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
TFIP11-217ENST00000619735 JPH4Q96JJ6 628 aa12.95□□□□□ -0.34
TFIP11-217ENST00000619735 ACIN1Q9UKV3 1341 aaKnown RBP12.94□□□□□ -0.34
TFIP11-217ENST00000619735 NPM1P06748 294 aaKnown RBP eCLIP12.93□□□□□ -0.34
TFIP11-217ENST00000619735 IGF1RP08069 1367 aa12.91□□□□□ -0.34
TFIP11-217ENST00000619735 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms