RNA–Protein interactions for RNA: ENST00000364566.1

RNU6-660P-201, Transcript of RNA, U6 small nuclear 660, pseudogene, humanhuman

BASIC

Gene RNU6-660P, Length 109 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-660P-201ENST00000364566 AEBP2Q6ZN18 517 aaPredicted RBP20.87■□□□□ 0.93
RNU6-660P-201ENST00000364566 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
RNU6-660P-201ENST00000364566 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
RNU6-660P-201ENST00000364566 SENP3Q9H4L4 574 aaPredicted RBP17.89■□□□□ 0.45
RNU6-660P-201ENST00000364566 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
RNU6-660P-201ENST00000364566 FOXD1Q16676 465 aa16.48■□□□□ 0.23
RNU6-660P-201ENST00000364566 ADRA2BP18089 450 aa15.83■□□□□ 0.12
RNU6-660P-201ENST00000364566 PPP6R1Q9UPN7 881 aa15.81■□□□□ 0.12
RNU6-660P-201ENST00000364566 PIAS4Q8N2W9 510 aaPredicted RBP15.62■□□□□ 0.09
RNU6-660P-201ENST00000364566 MSH5O43196 834 aa15.33■□□□□ 0.04
RNU6-660P-201ENST00000364566 PPP4R3CPQ6ZMV5 832 aa14.71□□□□□ -0.05
RNU6-660P-201ENST00000364566 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
RNU6-660P-201ENST00000364566 NCBP3Q53F19 620 aaKnown RBP14.45□□□□□ -0.1
RNU6-660P-201ENST00000364566 KCNA4P22459 653 aa14.34□□□□□ -0.11
RNU6-660P-201ENST00000364566 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
RNU6-660P-201ENST00000364566 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
RNU6-660P-201ENST00000364566 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
RNU6-660P-201ENST00000364566 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
RNU6-660P-201ENST00000364566 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
RNU6-660P-201ENST00000364566 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
RNU6-660P-201ENST00000364566 POTEDQ86YR6 584 aa13.78□□□□□ -0.2
RNU6-660P-201ENST00000364566 DNAJC5BQ9UF47 199 aa13.77□□□□□ -0.21
RNU6-660P-201ENST00000364566 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
RNU6-660P-201ENST00000364566 DCAF8L1A6NGE4 600 aa13.64□□□□□ -0.23
RNU6-660P-201ENST00000364566 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
RNU6-660P-201ENST00000364566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.28
RNU6-660P-201ENST00000364566 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
RNU6-660P-201ENST00000364566 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
RNU6-660P-201ENST00000364566 ZBTB22O15209 634 aa13.14□□□□□ -0.31
RNU6-660P-201ENST00000364566 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
RNU6-660P-201ENST00000364566 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
RNU6-660P-201ENST00000364566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
RNU6-660P-201ENST00000364566 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
RNU6-660P-201ENST00000364566 RNF39Q9H2S5 420 aa13.05□□□□□ -0.32
RNU6-660P-201ENST00000364566 U3KPZ7 1027 aaPredicted RBP13.05□□□□□ -0.32
RNU6-660P-201ENST00000364566 APLP2Q06481 763 aa12.98□□□□□ -0.33
RNU6-660P-201ENST00000364566 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
RNU6-660P-201ENST00000364566 C1QBPQ07021 282 aaKnown RBP12.97□□□□□ -0.33
RNU6-660P-201ENST00000364566 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
RNU6-660P-201ENST00000364566 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
RNU6-660P-201ENST00000364566 CAPN15O75808 1086 aa12.69□□□□□ -0.38
RNU6-660P-201ENST00000364566 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
RNU6-660P-201ENST00000364566 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
RNU6-660P-201ENST00000364566 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
RNU6-660P-201ENST00000364566 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
RNU6-660P-201ENST00000364566 DSG3P32926 999 aa12.42□□□□□ -0.42
RNU6-660P-201ENST00000364566 POLA2Q14181 598 aa12.4□□□□□ -0.42
RNU6-660P-201ENST00000364566 ABCB7O75027 752 aa12.38□□□□□ -0.43
RNU6-660P-201ENST00000364566 ZBTB12Q9Y330 459 aaPredicted RBP12.35□□□□□ -0.43
RNU6-660P-201ENST00000364566 FBLN2P98095 1184 aa12.27□□□□□ -0.45
RNU6-660P-201ENST00000364566 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.48
RNU6-660P-201ENST00000364566 OSCARQ8IYS5 282 aa11.97□□□□□ -0.49
RNU6-660P-201ENST00000364566 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
RNU6-660P-201ENST00000364566 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
RNU6-660P-201ENST00000364566 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
RNU6-660P-201ENST00000364566 FKBP8Q14318 412 aa11.94□□□□□ -0.5
RNU6-660P-201ENST00000364566 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
RNU6-660P-201ENST00000364566 SPDYE4A6NLX3 237 aa11.92□□□□□ -0.5
RNU6-660P-201ENST00000364566 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
RNU6-660P-201ENST00000364566 SSUH2Q9Y2M2 353 aa11.8□□□□□ -0.52
RNU6-660P-201ENST00000364566 AKT1S1Q96B36 256 aa11.77□□□□□ -0.53
RNU6-660P-201ENST00000364566 PROM2Q8N271 834 aa11.7□□□□□ -0.54
RNU6-660P-201ENST00000364566 PABPN1Q86U42 306 aaKnown RBP eCLIP11.69□□□□□ -0.54
RNU6-660P-201ENST00000364566 FBXO3Q9UK99 471 aa11.63□□□□□ -0.55
RNU6-660P-201ENST00000364566 STAG3Q9UJ98 1225 aa11.61□□□□□ -0.55
RNU6-660P-201ENST00000364566 SPDYE1Q8NFV5 336 aaPredicted RBP11.6□□□□□ -0.55
RNU6-660P-201ENST00000364566 REM2Q8IYK8 340 aaPredicted RBP11.59□□□□□ -0.55
RNU6-660P-201ENST00000364566 CLEC11AQ9Y240 323 aa11.49□□□□□ -0.57
RNU6-660P-201ENST00000364566 PITPNM1O00562 1244 aa11.46□□□□□ -0.57
RNU6-660P-201ENST00000364566 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
RNU6-660P-201ENST00000364566 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
RNU6-660P-201ENST00000364566 VASPP50552 380 aaPredicted RBP11.38□□□□□ -0.59
RNU6-660P-201ENST00000364566 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
RNU6-660P-201ENST00000364566 PLCD3Q8N3E9 789 aa11.33□□□□□ -0.6
RNU6-660P-201ENST00000364566 MIER1Q8N108 512 aa11.31□□□□□ -0.6
RNU6-660P-201ENST00000364566 ZBTB47Q9UFB7 747 aaPredicted RBP11.3□□□□□ -0.6
RNU6-660P-201ENST00000364566 FXR2P51116 673 aaKnown RBP eCLIP11.24□□□□□ -0.61
RNU6-660P-201ENST00000364566 KLHL34Q8N239 644 aa11.21□□□□□ -0.61
RNU6-660P-201ENST00000364566 CREBZFQ9NS37 354 aa11.2□□□□□ -0.62
RNU6-660P-201ENST00000364566 PRKAR2AP13861 404 aaKnown RBP11.19□□□□□ -0.62
RNU6-660P-201ENST00000364566 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
RNU6-660P-201ENST00000364566 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.62
RNU6-660P-201ENST00000364566 IFNLR1Q8IU57 520 aaPredicted RBP11.15□□□□□ -0.62
RNU6-660P-201ENST00000364566 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
RNU6-660P-201ENST00000364566 SPOCK2Q92563 424 aa11.11□□□□□ -0.63
RNU6-660P-201ENST00000364566 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
RNU6-660P-201ENST00000364566 MNX1P50219 401 aaPredicted RBP11.06□□□□□ -0.64
RNU6-660P-201ENST00000364566 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.65
RNU6-660P-201ENST00000364566 FAM212AQ96EL1 285 aa10.99□□□□□ -0.65
RNU6-660P-201ENST00000364566 PAK3O75914 559 aaPredicted RBP10.98□□□□□ -0.65
RNU6-660P-201ENST00000364566 NUBP1P53384 320 aa10.97□□□□□ -0.65
RNU6-660P-201ENST00000364566 GSE1Q14687 1217 aa10.97□□□□□ -0.65
RNU6-660P-201ENST00000364566 POTEHQ6S545 545 aa10.96□□□□□ -0.65
RNU6-660P-201ENST00000364566 CIZ1Q9ULV3 898 aaPredicted RBP10.92□□□□□ -0.66
RNU6-660P-201ENST00000364566 DCAF8Q5TAQ9 597 aa10.91□□□□□ -0.66
RNU6-660P-201ENST00000364566 TRIM41Q8WV44 630 aa10.91□□□□□ -0.66
RNU6-660P-201ENST00000364566 RASEFQ8IZ41 740 aa10.9□□□□□ -0.66
RNU6-660P-201ENST00000364566 CD44P16070 742 aaKnown RBP10.89□□□□□ -0.67
RNU6-660P-201ENST00000364566 TSPYL2Q9H2G4 693 aaPredicted RBP10.87□□□□□ -0.67
RNU6-660P-201ENST00000364566 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms