RNA–Protein interactions for RNA: ENST00000396056.6

ZNF35-202, Transcript of zinc finger protein 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF35, Length 2,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF35-202ENST00000396056 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
ZNF35-202ENST00000396056 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.05
ZNF35-202ENST00000396056 SUPT5HO00267 1087 aaKnown RBP15.15■□□□□ 0.02
ZNF35-202ENST00000396056 ZCCHC6Q5VYS8 1495 aaKnown RBP14.97□□□□□ -0.01
ZNF35-202ENST00000396056 MYO15BQ96JP2 1530 aa14.91□□□□□ -0.02
ZNF35-202ENST00000396056 HRCP23327 699 aa14.88□□□□□ -0.03
ZNF35-202ENST00000396056 CHIC1Q5VXU3 224 aa14.83□□□□□ -0.03
ZNF35-202ENST00000396056 CCDC180Q9P1Z9 1646 aa14.82□□□□□ -0.04
ZNF35-202ENST00000396056 PCGF6Q9BYE7 350 aa14.7□□□□□ -0.06
ZNF35-202ENST00000396056 DCAF8L2P0C7V8 631 aa14.6□□□□□ -0.07
ZNF35-202ENST00000396056 PPARGC1BQ86YN6 1023 aaKnown RBP14.59□□□□□ -0.07
ZNF35-202ENST00000396056 DCAF1Q9Y4B6 1507 aa14.53□□□□□ -0.08
ZNF35-202ENST00000396056 LOC105371045A0A1W2PR82 267 aa14.44□□□□□ -0.1
ZNF35-202ENST00000396056 TRIM26Q12899 539 aaPredicted RBP14.31□□□□□ -0.12
ZNF35-202ENST00000396056 ABCC9O60706 1549 aa14.21□□□□□ -0.14
ZNF35-202ENST00000396056 ZEB1P37275 1124 aaPredicted RBP14.09□□□□□ -0.15
ZNF35-202ENST00000396056 RSF1Q96T23 1441 aaPredicted RBP14.08□□□□□ -0.16
ZNF35-202ENST00000396056 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
ZNF35-202ENST00000396056 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
ZNF35-202ENST00000396056 RB1CC1Q8TDY2 1594 aa14.02□□□□□ -0.17
ZNF35-202ENST00000396056 FAM9AQ8IZU1 332 aaPredicted RBP14□□□□□ -0.17
ZNF35-202ENST00000396056 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
ZNF35-202ENST00000396056 SCAF1Q9H7N4 1312 aaKnown RBP13.92□□□□□ -0.18
ZNF35-202ENST00000396056 PELP1Q8IZL8 1130 aaKnown RBP13.91□□□□□ -0.18
ZNF35-202ENST00000396056 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.21
ZNF35-202ENST00000396056 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
ZNF35-202ENST00000396056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
ZNF35-202ENST00000396056 WIZO95785 1651 aa13.7□□□□□ -0.22
ZNF35-202ENST00000396056 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
ZNF35-202ENST00000396056 ACIN1Q9UKV3 1341 aaKnown RBP13.66□□□□□ -0.22
ZNF35-202ENST00000396056 NEUROD1Q13562 356 aa13.64□□□□□ -0.23
ZNF35-202ENST00000396056 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
ZNF35-202ENST00000396056 NACADO15069 1562 aa13.63□□□□□ -0.23
ZNF35-202ENST00000396056 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
ZNF35-202ENST00000396056 DIEXFQ68CQ4 756 aaKnown RBP13.58□□□□□ -0.24
ZNF35-202ENST00000396056 TTBK1Q5TCY1 1321 aaPredicted RBP13.55□□□□□ -0.24
ZNF35-202ENST00000396056 WRNQ14191 1432 aaPredicted RBP eCLIP13.53□□□□□ -0.24
ZNF35-202ENST00000396056 GTF3C3Q9Y5Q9 886 aa13.53□□□□□ -0.24
ZNF35-202ENST00000396056 CENPBP07199 599 aaPredicted RBP13.53□□□□□ -0.24
ZNF35-202ENST00000396056 ABCC8Q09428 1581 aa13.52□□□□□ -0.24
ZNF35-202ENST00000396056 CEP162Q5TB80 1403 aa13.51□□□□□ -0.25
ZNF35-202ENST00000396056 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
ZNF35-202ENST00000396056 TOP2AP11388 1531 aaKnown RBP13.46□□□□□ -0.26
ZNF35-202ENST00000396056 SOGA1O94964 1423 aa13.43□□□□□ -0.26
ZNF35-202ENST00000396056 TNIKQ9UKE5 1360 aa13.43□□□□□ -0.26
ZNF35-202ENST00000396056 SMARCA2P51531 1590 aa13.41□□□□□ -0.26
ZNF35-202ENST00000396056 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
ZNF35-202ENST00000396056 SMARCA4P51532 1647 aa13.38□□□□□ -0.27
ZNF35-202ENST00000396056 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
ZNF35-202ENST00000396056 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
ZNF35-202ENST00000396056 EEA1Q15075 1411 aa13.35□□□□□ -0.27
ZNF35-202ENST00000396056 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
ZNF35-202ENST00000396056 YTHDC1Q96MU7 727 aaKnown RBP13.33□□□□□ -0.28
ZNF35-202ENST00000396056 GOLGA3Q08378 1498 aa13.32□□□□□ -0.28
ZNF35-202ENST00000396056 MYT1Q01538 1121 aa13.27□□□□□ -0.28
ZNF35-202ENST00000396056 MIER1Q8N108 512 aa13.26□□□□□ -0.29
ZNF35-202ENST00000396056 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
ZNF35-202ENST00000396056 UNC13AQ9UPW8 1703 aa13.23□□□□□ -0.29
ZNF35-202ENST00000396056 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
ZNF35-202ENST00000396056 KIF21BO75037 1637 aa13.19□□□□□ -0.3
ZNF35-202ENST00000396056 CLIP1P30622 1438 aa13.19□□□□□ -0.3
ZNF35-202ENST00000396056 SYNJ1O43426 1573 aa13.17□□□□□ -0.3
ZNF35-202ENST00000396056 VPS8Q8N3P4 1428 aa13.16□□□□□ -0.3
ZNF35-202ENST00000396056 APLP2Q06481 763 aa13.1□□□□□ -0.31
ZNF35-202ENST00000396056 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
ZNF35-202ENST00000396056 RAPGEF2Q9Y4G8 1499 aa13.09□□□□□ -0.31
ZNF35-202ENST00000396056 RANGAP1P46060 587 aaPredicted RBP13.07□□□□□ -0.32
ZNF35-202ENST00000396056 PEG3Q9GZU2 1588 aa13.06□□□□□ -0.32
ZNF35-202ENST00000396056 PABPN1Q86U42 306 aaKnown RBP eCLIP13.05□□□□□ -0.32
ZNF35-202ENST00000396056 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
ZNF35-202ENST00000396056 DHX57Q6P158 1386 aaKnown RBP13.02□□□□□ -0.33
ZNF35-202ENST00000396056 CLSPNQ9HAW4 1339 aa12.99□□□□□ -0.33
ZNF35-202ENST00000396056 SUPT16HQ9Y5B9 1047 aaKnown RBP12.96□□□□□ -0.33
ZNF35-202ENST00000396056 ATAD2BQ9ULI0 1458 aa12.95□□□□□ -0.34
ZNF35-202ENST00000396056 ARAP1Q96P48 1450 aa12.95□□□□□ -0.34
ZNF35-202ENST00000396056 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
ZNF35-202ENST00000396056 KANK4Q5T7N3 995 aaPredicted RBP12.92□□□□□ -0.34
ZNF35-202ENST00000396056 ERICH3Q5RHP9 1530 aa12.91□□□□□ -0.34
ZNF35-202ENST00000396056 PRXQ9BXM0 1461 aa12.9□□□□□ -0.35
ZNF35-202ENST00000396056 BIVM-ERCC5R4GMW8 1640 aa12.89□□□□□ -0.35
ZNF35-202ENST00000396056 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
ZNF35-202ENST00000396056 CUX2O14529 1486 aa12.85□□□□□ -0.35
ZNF35-202ENST00000396056 TSHZ2Q9NRE2 1034 aa12.83□□□□□ -0.36
ZNF35-202ENST00000396056 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
ZNF35-202ENST00000396056 ITGAEP38570 1179 aa12.8□□□□□ -0.36
ZNF35-202ENST00000396056 KCNH8Q96L42 1107 aa12.8□□□□□ -0.36
ZNF35-202ENST00000396056 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
ZNF35-202ENST00000396056 CUX1P39880 1505 aa12.78□□□□□ -0.36
ZNF35-202ENST00000396056 MAPKBP1O60336 1514 aa12.77□□□□□ -0.36
ZNF35-202ENST00000396056 KIF27Q86VH2 1401 aa12.77□□□□□ -0.37
ZNF35-202ENST00000396056 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
ZNF35-202ENST00000396056 BCANQ96GW7 911 aa12.72□□□□□ -0.37
ZNF35-202ENST00000396056 ANP32EQ9BTT0 268 aa12.72□□□□□ -0.37
ZNF35-202ENST00000396056 TIAM1Q13009 1591 aa12.69□□□□□ -0.38
ZNF35-202ENST00000396056 WDR97A6NE52 1622 aa12.69□□□□□ -0.38
ZNF35-202ENST00000396056 SETD5Q9C0A6 1442 aa12.68□□□□□ -0.38
ZNF35-202ENST00000396056 DDX10Q13206 875 aaKnown RBP12.68□□□□□ -0.38
ZNF35-202ENST00000396056 FKBP8Q14318 412 aa12.67□□□□□ -0.38
ZNF35-202ENST00000396056 SIN3AQ96ST3 1273 aa12.66□□□□□ -0.38
ZNF35-202ENST00000396056 HMGXB3Q12766 1538 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms