RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 AEBP2Q6ZN18 517 aaPredicted RBP20.54■□□□□ 0.88
SOX2-OT-210ENST00000487240 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
SOX2-OT-210ENST00000487240 PHF23Q9BUL5 403 aaPredicted RBP17.94■□□□□ 0.46
SOX2-OT-210ENST00000487240 SENP3Q9H4L4 574 aaPredicted RBP17.4■□□□□ 0.38
SOX2-OT-210ENST00000487240 PLPPR3Q6T4P5 718 aa16.7■□□□□ 0.26
SOX2-OT-210ENST00000487240 FOXD1Q16676 465 aa16.1■□□□□ 0.17
SOX2-OT-210ENST00000487240 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
SOX2-OT-210ENST00000487240 ADRA2BP18089 450 aa15.74■□□□□ 0.11
SOX2-OT-210ENST00000487240 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
SOX2-OT-210ENST00000487240 PIAS4Q8N2W9 510 aaPredicted RBP15.28■□□□□ 0.04
SOX2-OT-210ENST00000487240 KCNA4P22459 653 aa14.76□□□□□ -0.05
SOX2-OT-210ENST00000487240 PPP4R3CPQ6ZMV5 832 aa14.75□□□□□ -0.05
SOX2-OT-210ENST00000487240 MSH5O43196 834 aa14.74□□□□□ -0.05
SOX2-OT-210ENST00000487240 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
SOX2-OT-210ENST00000487240 SCAF1Q9H7N4 1312 aaKnown RBP14.42□□□□□ -0.1
SOX2-OT-210ENST00000487240 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.13
SOX2-OT-210ENST00000487240 NPM3O75607 178 aaKnown RBP14.24□□□□□ -0.13
SOX2-OT-210ENST00000487240 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
SOX2-OT-210ENST00000487240 CCDC180Q9P1Z9 1646 aa14.16□□□□□ -0.14
SOX2-OT-210ENST00000487240 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
SOX2-OT-210ENST00000487240 ABCC9O60706 1549 aa14.1□□□□□ -0.15
SOX2-OT-210ENST00000487240 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
SOX2-OT-210ENST00000487240 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
SOX2-OT-210ENST00000487240 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
SOX2-OT-210ENST00000487240 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
SOX2-OT-210ENST00000487240 CSRNP3Q8WYN3 585 aa13.76□□□□□ -0.21
SOX2-OT-210ENST00000487240 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
SOX2-OT-210ENST00000487240 ZBTB22O15209 634 aa13.57□□□□□ -0.24
SOX2-OT-210ENST00000487240 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
SOX2-OT-210ENST00000487240 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
SOX2-OT-210ENST00000487240 RB1CC1Q8TDY2 1594 aa13.44□□□□□ -0.26
SOX2-OT-210ENST00000487240 DCAF8L2P0C7V8 631 aa13.42□□□□□ -0.26
SOX2-OT-210ENST00000487240 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
SOX2-OT-210ENST00000487240 NACADO15069 1562 aa13.36□□□□□ -0.27
SOX2-OT-210ENST00000487240 DCAF8L1A6NGE4 600 aa13.35□□□□□ -0.27
SOX2-OT-210ENST00000487240 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
SOX2-OT-210ENST00000487240 ZCCHC6Q5VYS8 1495 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-210ENST00000487240 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-210ENST00000487240 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
SOX2-OT-210ENST00000487240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.14□□□□□ -0.31
SOX2-OT-210ENST00000487240 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
SOX2-OT-210ENST00000487240 DCAF1Q9Y4B6 1507 aa13.07□□□□□ -0.32
SOX2-OT-210ENST00000487240 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
SOX2-OT-210ENST00000487240 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
SOX2-OT-210ENST00000487240 SCRIBQ14160 1630 aa12.98□□□□□ -0.33
SOX2-OT-210ENST00000487240 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
SOX2-OT-210ENST00000487240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.92□□□□□ -0.34
SOX2-OT-210ENST00000487240 HNRNPUL2Q1KMD3 747 aaKnown RBP12.92□□□□□ -0.34
SOX2-OT-210ENST00000487240 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
SOX2-OT-210ENST00000487240 SHROOM4Q9ULL8 1493 aa12.83□□□□□ -0.36
SOX2-OT-210ENST00000487240 ATF5Q9Y2D1 282 aaPredicted RBP12.76□□□□□ -0.37
SOX2-OT-210ENST00000487240 APLP2Q06481 763 aa12.72□□□□□ -0.37
SOX2-OT-210ENST00000487240 CC2D2AQ9P2K1 1620 aa12.72□□□□□ -0.37
SOX2-OT-210ENST00000487240 EIF4G1Q04637 1599 aaKnown RBP12.72□□□□□ -0.37
SOX2-OT-210ENST00000487240 CECR2Q9BXF3 1484 aa12.67□□□□□ -0.38
SOX2-OT-210ENST00000487240 RNF39Q9H2S5 420 aa12.64□□□□□ -0.39
SOX2-OT-210ENST00000487240 ZNF219Q9P2Y4 722 aaPredicted RBP12.55□□□□□ -0.4
SOX2-OT-210ENST00000487240 C1QBPQ07021 282 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-210ENST00000487240 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
SOX2-OT-210ENST00000487240 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
SOX2-OT-210ENST00000487240 CAPN15O75808 1086 aa12.45□□□□□ -0.42
SOX2-OT-210ENST00000487240 FKBP8Q14318 412 aa12.45□□□□□ -0.42
SOX2-OT-210ENST00000487240 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
SOX2-OT-210ENST00000487240 NCAPD3P42695 1498 aa12.33□□□□□ -0.44
SOX2-OT-210ENST00000487240 ATAD2BQ9ULI0 1458 aa12.33□□□□□ -0.44
SOX2-OT-210ENST00000487240 POLA2Q14181 598 aa12.31□□□□□ -0.44
SOX2-OT-210ENST00000487240 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
SOX2-OT-210ENST00000487240 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
SOX2-OT-210ENST00000487240 FBLN2P98095 1184 aa12.25□□□□□ -0.45
SOX2-OT-210ENST00000487240 HMGXB3Q12766 1538 aa12.25□□□□□ -0.45
SOX2-OT-210ENST00000487240 MROH2BQ7Z745 1585 aa12.25□□□□□ -0.45
SOX2-OT-210ENST00000487240 BAZ1BQ9UIG0 1483 aaKnown RBP12.23□□□□□ -0.45
SOX2-OT-210ENST00000487240 ABCB7O75027 752 aa12.23□□□□□ -0.45
SOX2-OT-210ENST00000487240 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
SOX2-OT-210ENST00000487240 PEG3Q9GZU2 1588 aa12.19□□□□□ -0.46
SOX2-OT-210ENST00000487240 ERCC6Q03468 1493 aa12.17□□□□□ -0.46
SOX2-OT-210ENST00000487240 ZBTB12Q9Y330 459 aaPredicted RBP12.17□□□□□ -0.46
SOX2-OT-210ENST00000487240 DSG3P32926 999 aa12.15□□□□□ -0.46
SOX2-OT-210ENST00000487240 NESP48681 1621 aa12.15□□□□□ -0.47
SOX2-OT-210ENST00000487240 SPDYE4A6NLX3 237 aa12.13□□□□□ -0.47
SOX2-OT-210ENST00000487240 WIZO95785 1651 aa12.11□□□□□ -0.47
SOX2-OT-210ENST00000487240 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-210ENST00000487240 CUX2O14529 1486 aa12.05□□□□□ -0.48
SOX2-OT-210ENST00000487240 LAMC3Q9Y6N6 1575 aa12.04□□□□□ -0.48
SOX2-OT-210ENST00000487240 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
SOX2-OT-210ENST00000487240 KIF21AQ7Z4S6 1674 aa11.98□□□□□ -0.49
SOX2-OT-210ENST00000487240 CADPSQ9ULU8 1353 aa11.98□□□□□ -0.49
SOX2-OT-210ENST00000487240 PDS5BQ9NTI5 1447 aa11.97□□□□□ -0.49
SOX2-OT-210ENST00000487240 THOC2Q8NI27 1593 aaKnown RBP11.96□□□□□ -0.49
SOX2-OT-210ENST00000487240 TOP2AP11388 1531 aaKnown RBP11.96□□□□□ -0.5
SOX2-OT-210ENST00000487240 PROM2Q8N271 834 aa11.95□□□□□ -0.5
SOX2-OT-210ENST00000487240 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
SOX2-OT-210ENST00000487240 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
SOX2-OT-210ENST00000487240 AMER1Q5JTC6 1135 aaPredicted RBP11.9□□□□□ -0.5
SOX2-OT-210ENST00000487240 OSCARQ8IYS5 282 aa11.9□□□□□ -0.5
SOX2-OT-210ENST00000487240 MRC2Q9UBG0 1479 aa11.88□□□□□ -0.51
SOX2-OT-210ENST00000487240 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
SOX2-OT-210ENST00000487240 CFTRP13569 1480 aa11.86□□□□□ -0.51
SOX2-OT-210ENST00000487240 FANCD2Q9BXW9 1451 aa11.86□□□□□ -0.51
SOX2-OT-210ENST00000487240 CEP164Q9UPV0 1460 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms