Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SHMT2P34897 AC093664.1-201ENST00000511779 289 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
SHMT2P34897 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.32□□□□□ -1.4
SHMT2P34897 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SHMT2P34897 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.32□□□□□ -1.4
SHMT2P34897 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.32□□□□□ -1.4
SHMT2P34897 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.32□□□□□ -1.4
SHMT2P34897 AL078623.1-201ENST00000602702 907 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 AC019257.2-201ENST00000605539 497 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.32□□□□□ -1.4
SHMT2P34897 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 AP001264.1-201ENST00000620602 703 ntBASIC6.32□□□□□ -1.4
SHMT2P34897 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.32□□□□□ -1.4
SHMT2P34897 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.32□□□□□ -1.4
SHMT2P34897 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SHMT2P34897 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHMT2P34897 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.32□□□□□ -1.4
SHMT2P34897 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.32□□□□□ -1.4
SHMT2P34897 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
SHMT2P34897 AP004289.1-201ENST00000436307 2205 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.31□□□□□ -1.4
SHMT2P34897 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 CCAT2-201ENST00000630920 1752 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.31□□□□□ -1.4
SHMT2P34897 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 RNA5SP485-201ENST00000365053 119 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.31□□□□□ -1.4
SHMT2P34897 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 AL023284.3-201ENST00000407767 334 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.31□□□□□ -1.4
SHMT2P34897 AL360013.1-201ENST00000419031 858 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.31□□□□□ -1.4
SHMT2P34897 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.31□□□□□ -1.4
SHMT2P34897 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.31□□□□□ -1.4
SHMT2P34897 BMP6P1-201ENST00000431230 679 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.31□□□□□ -1.4
SHMT2P34897 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.31□□□□□ -1.4
SHMT2P34897 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.31□□□□□ -1.4
SHMT2P34897 RPL23AP64-201ENST00000469465 435 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.31□□□□□ -1.4
SHMT2P34897 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.31□□□□□ -1.4
SHMT2P34897 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.31□□□□□ -1.4
SHMT2P34897 AC023968.1-201ENST00000560719 475 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.31□□□□□ -1.4
SHMT2P34897 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SHMT2P34897 AC133552.4-201ENST00000576103 676 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.31□□□□□ -1.4
SHMT2P34897 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.31□□□□□ -1.4
SHMT2P34897 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.31□□□□□ -1.4
SHMT2P34897 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.31□□□□□ -1.4
SHMT2P34897 NDUFB9P1-201ENST00000604683 510 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.31□□□□□ -1.4
SHMT2P34897 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.31□□□□□ -1.4
SHMT2P34897 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SHMT2P34897 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SHMT2P34897 OFD1P17-201ENST00000437639 3018 ntBASIC6.31□□□□□ -1.4
SHMT2P34897 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.31□□□□□ -1.4
SHMT2P34897 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 AC105749.1-201ENST00000631338 2008 ntBASIC6.3□□□□□ -1.4
SHMT2P34897 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SHMT2P34897 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.3□□□□□ -1.4
SHMT2P34897 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHMT2P34897 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SHMT2P34897 AL391419.1-201ENST00000398901 1275 ntBASIC6.3□□□□□ -1.4
SHMT2P34897 PRELID1P1-201ENST00000403549 660 ntBASIC6.3□□□□□ -1.4
SHMT2P34897 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.3□□□□□ -1.4
SHMT2P34897 AL139184.1-202ENST00000422303 222 ntBASIC6.3□□□□□ -1.4
SHMT2P34897 CYCSP52-201ENST00000422857 310 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms