RNA–Protein interactions for RNA: ENST00000626259.2

AP001043.1-201, humanhuman

TSL 5 BASIC

Gene AP001043.1, Length 773 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001043.1-201ENST00000626259 AEBP2Q6ZN18 517 aaPredicted RBP18.47■□□□□ 0.55
AP001043.1-201ENST00000626259 CHIC1Q5VXU3 224 aa17.32■□□□□ 0.36
AP001043.1-201ENST00000626259 SENP3Q9H4L4 574 aaPredicted RBP15.73■□□□□ 0.11
AP001043.1-201ENST00000626259 PHF23Q9BUL5 403 aaPredicted RBP15.52■□□□□ 0.08
AP001043.1-201ENST00000626259 FOXD1Q16676 465 aa14.72□□□□□ -0.05
AP001043.1-201ENST00000626259 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
AP001043.1-201ENST00000626259 MSH5O43196 834 aa13.81□□□□□ -0.2
AP001043.1-201ENST00000626259 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
AP001043.1-201ENST00000626259 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
AP001043.1-201ENST00000626259 PPP6R1Q9UPN7 881 aa13.64□□□□□ -0.23
AP001043.1-201ENST00000626259 ADRA2BP18089 450 aa13.57□□□□□ -0.24
AP001043.1-201ENST00000626259 SLC24A1O60721 1099 aa13.49□□□□□ -0.25
AP001043.1-201ENST00000626259 MYT1Q01538 1121 aa12.65□□□□□ -0.38
AP001043.1-201ENST00000626259 TTBK1Q5TCY1 1321 aaPredicted RBP12.62□□□□□ -0.39
AP001043.1-201ENST00000626259 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
AP001043.1-201ENST00000626259 DAXXQ9UER7 740 aaPredicted RBP12.49□□□□□ -0.41
AP001043.1-201ENST00000626259 DMRT2Q9Y5R5 561 aa12.47□□□□□ -0.41
AP001043.1-201ENST00000626259 SCAF1Q9H7N4 1312 aaKnown RBP12.36□□□□□ -0.43
AP001043.1-201ENST00000626259 PELP1Q8IZL8 1130 aaKnown RBP12.3□□□□□ -0.44
AP001043.1-201ENST00000626259 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
AP001043.1-201ENST00000626259 ERICH6Q7L0X2 663 aa12.09□□□□□ -0.47
AP001043.1-201ENST00000626259 EHMT2Q96KQ7 1210 aa12.09□□□□□ -0.47
AP001043.1-201ENST00000626259 PPP4R3CPQ6ZMV5 832 aa12.03□□□□□ -0.48
AP001043.1-201ENST00000626259 APLP2Q06481 763 aa12□□□□□ -0.49
AP001043.1-201ENST00000626259 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
AP001043.1-201ENST00000626259 DCAF8L1A6NGE4 600 aa11.93□□□□□ -0.5
AP001043.1-201ENST00000626259 HOXD11P31277 338 aaPredicted RBP11.93□□□□□ -0.5
AP001043.1-201ENST00000626259 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
AP001043.1-201ENST00000626259 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
AP001043.1-201ENST00000626259 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
AP001043.1-201ENST00000626259 ARXQ96QS3 562 aa11.82□□□□□ -0.52
AP001043.1-201ENST00000626259 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
AP001043.1-201ENST00000626259 RNF216Q9NWF9 866 aaPredicted RBP11.78□□□□□ -0.52
AP001043.1-201ENST00000626259 PRKCSHP14314 528 aaPredicted RBP11.7□□□□□ -0.54
AP001043.1-201ENST00000626259 C1QBPQ07021 282 aaKnown RBP11.59□□□□□ -0.55
AP001043.1-201ENST00000626259 RANGAP1P46060 587 aaPredicted RBP11.58□□□□□ -0.56
AP001043.1-201ENST00000626259 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
AP001043.1-201ENST00000626259 NPM3O75607 178 aaKnown RBP11.37□□□□□ -0.59
AP001043.1-201ENST00000626259 HOMEZQ8IX15 550 aa11.37□□□□□ -0.59
AP001043.1-201ENST00000626259 KCNA4P22459 653 aa11.33□□□□□ -0.6
AP001043.1-201ENST00000626259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.33□□□□□ -0.6
AP001043.1-201ENST00000626259 TIMELESSQ9UNS1 1208 aa11.28□□□□□ -0.6
AP001043.1-201ENST00000626259 CSRNP3Q8WYN3 585 aa11.26□□□□□ -0.61
AP001043.1-201ENST00000626259 EIF5BO60841 1220 aaKnown RBP11.23□□□□□ -0.61
AP001043.1-201ENST00000626259 BCANQ96GW7 911 aa11.2□□□□□ -0.62
AP001043.1-201ENST00000626259 TAOK2Q9UL54 1235 aa11.2□□□□□ -0.62
AP001043.1-201ENST00000626259 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
AP001043.1-201ENST00000626259 U3KPZ7 1027 aaPredicted RBP11.13□□□□□ -0.63
AP001043.1-201ENST00000626259 SPINK5Q9NQ38 1064 aaPredicted RBP11.02□□□□□ -0.65
AP001043.1-201ENST00000626259 DSG3P32926 999 aa10.98□□□□□ -0.65
AP001043.1-201ENST00000626259 CAPN15O75808 1086 aa10.97□□□□□ -0.65
AP001043.1-201ENST00000626259 PODXL2Q9NZ53 605 aa10.97□□□□□ -0.65
AP001043.1-201ENST00000626259 TPRNQ4KMQ1 711 aa10.93□□□□□ -0.66
AP001043.1-201ENST00000626259 GTF3C3Q9Y5Q9 886 aa10.93□□□□□ -0.66
AP001043.1-201ENST00000626259 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
AP001043.1-201ENST00000626259 KLHL34Q8N239 644 aa10.91□□□□□ -0.66
AP001043.1-201ENST00000626259 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
AP001043.1-201ENST00000626259 PLCB2Q00722 1185 aa10.83□□□□□ -0.68
AP001043.1-201ENST00000626259 NPM2Q86SE8 214 aaKnown RBP10.83□□□□□ -0.68
AP001043.1-201ENST00000626259 POTEHQ6S545 545 aa10.79□□□□□ -0.68
AP001043.1-201ENST00000626259 TRHP20396 242 aaPredicted RBP10.76□□□□□ -0.69
AP001043.1-201ENST00000626259 DCAF8L2P0C7V8 631 aa10.73□□□□□ -0.69
AP001043.1-201ENST00000626259 SLC4A1APQ9BWU0 796 aaKnown RBP10.73□□□□□ -0.69
AP001043.1-201ENST00000626259 ABCB7O75027 752 aa10.72□□□□□ -0.69
AP001043.1-201ENST00000626259 ZNF219Q9P2Y4 722 aaPredicted RBP10.71□□□□□ -0.69
AP001043.1-201ENST00000626259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.67□□□□□ -0.7
AP001043.1-201ENST00000626259 HNRNPUL2Q1KMD3 747 aaKnown RBP10.67□□□□□ -0.7
AP001043.1-201ENST00000626259 HAP1P54257 671 aaPredicted RBP10.66□□□□□ -0.7
AP001043.1-201ENST00000626259 TMEM132AQ24JP5 1023 aa10.64□□□□□ -0.71
AP001043.1-201ENST00000626259 C14orf37Q86TY3 774 aa10.64□□□□□ -0.71
AP001043.1-201ENST00000626259 SAMD1Q6SPF0 538 aaPredicted RBP10.62□□□□□ -0.71
AP001043.1-201ENST00000626259 VSIG10Q8N0Z9 540 aa10.61□□□□□ -0.71
AP001043.1-201ENST00000626259 BCL11AQ9H165 835 aa10.59□□□□□ -0.71
AP001043.1-201ENST00000626259 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
AP001043.1-201ENST00000626259 MYCNP04198 464 aaPredicted RBP10.48□□□□□ -0.73
AP001043.1-201ENST00000626259 CDK11AQ9UQ88 783 aaPredicted RBP10.47□□□□□ -0.73
AP001043.1-201ENST00000626259 POLA2Q14181 598 aa10.44□□□□□ -0.74
AP001043.1-201ENST00000626259 RBM42Q9BTD8 480 aaKnown RBP10.44□□□□□ -0.74
AP001043.1-201ENST00000626259 HMGB1P09429 215 aaKnown RBP10.42□□□□□ -0.74
AP001043.1-201ENST00000626259 PDIA4P13667 645 aaKnown RBP10.39□□□□□ -0.75
AP001043.1-201ENST00000626259 TRIM26Q12899 539 aaPredicted RBP10.38□□□□□ -0.75
AP001043.1-201ENST00000626259 UBE2Q2Q8WVN8 375 aa10.32□□□□□ -0.76
AP001043.1-201ENST00000626259 CDK11BP21127 795 aaKnown RBP10.31□□□□□ -0.76
AP001043.1-201ENST00000626259 CHRDL2Q6WN34 429 aa10.31□□□□□ -0.76
AP001043.1-201ENST00000626259 ATF5Q9Y2D1 282 aaPredicted RBP10.31□□□□□ -0.76
AP001043.1-201ENST00000626259 FOXD4L1Q9NU39 408 aa10.27□□□□□ -0.77
AP001043.1-201ENST00000626259 SHROOM4Q9ULL8 1493 aa10.26□□□□□ -0.77
AP001043.1-201ENST00000626259 NEFLP07196 543 aa10.26□□□□□ -0.77
AP001043.1-201ENST00000626259 LOC105371045A0A1W2PR82 267 aa10.24□□□□□ -0.77
AP001043.1-201ENST00000626259 BRD2P25440 801 aaKnown RBP10.23□□□□□ -0.77
AP001043.1-201ENST00000626259 FAM9AQ8IZU1 332 aaPredicted RBP10.22□□□□□ -0.77
AP001043.1-201ENST00000626259 SUPT5HO00267 1087 aaKnown RBP10.21□□□□□ -0.77
AP001043.1-201ENST00000626259 HSP90B1P14625 803 aaKnown RBP10.21□□□□□ -0.77
AP001043.1-201ENST00000626259 HRCP23327 699 aa10.21□□□□□ -0.77
AP001043.1-201ENST00000626259 TAF7LQ5H9L4 462 aa10.19□□□□□ -0.78
AP001043.1-201ENST00000626259 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
AP001043.1-201ENST00000626259 CHMP4AQ9BY43 222 aa10.16□□□□□ -0.78
AP001043.1-201ENST00000626259 KDM2AQ9Y2K7 1162 aa10.16□□□□□ -0.78
AP001043.1-201ENST00000626259 ZBTB12Q9Y330 459 aaPredicted RBP10.16□□□□□ -0.78
AP001043.1-201ENST00000626259 UBTFP17480 764 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms