RNA–Protein interactions for RNA: ENST00000250617.6

ARHGEF6-201, Transcript of Rac/Cdc42 guanine nucleotide exchange factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF6, Length 6,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF6-201ENST00000250617 NISCHQ9Y2I1 1504 aa12.4□□□□□ -0.42
ARHGEF6-201ENST00000250617 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
ARHGEF6-201ENST00000250617 SHROOM4Q9ULL8 1493 aa11.23□□□□□ -0.61
ARHGEF6-201ENST00000250617 SUPT5HO00267 1087 aaKnown RBP11.19□□□□□ -0.62
ARHGEF6-201ENST00000250617 EHMT2Q96KQ7 1210 aa10.51□□□□□ -0.73
ARHGEF6-201ENST00000250617 PCGF6Q9BYE7 350 aa10.51□□□□□ -0.73
ARHGEF6-201ENST00000250617 CHIC1Q5VXU3 224 aa10.46□□□□□ -0.73
ARHGEF6-201ENST00000250617 FAM9AQ8IZU1 332 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF6-201ENST00000250617 ZCCHC6Q5VYS8 1495 aaKnown RBP10.4□□□□□ -0.74
ARHGEF6-201ENST00000250617 TRIM41Q8WV44 630 aa10.37□□□□□ -0.75
ARHGEF6-201ENST00000250617 CCDC180Q9P1Z9 1646 aa10.33□□□□□ -0.76
ARHGEF6-201ENST00000250617 LOC105371045A0A1W2PR82 267 aa10.3□□□□□ -0.76
ARHGEF6-201ENST00000250617 HRCP23327 699 aa10.26□□□□□ -0.77
ARHGEF6-201ENST00000250617 TRIM26Q12899 539 aaPredicted RBP10.18□□□□□ -0.78
ARHGEF6-201ENST00000250617 TTBK1Q5TCY1 1321 aaPredicted RBP10.17□□□□□ -0.78
ARHGEF6-201ENST00000250617 ZEB1P37275 1124 aaPredicted RBP10.14□□□□□ -0.79
ARHGEF6-201ENST00000250617 ABCC9O60706 1549 aa10.14□□□□□ -0.79
ARHGEF6-201ENST00000250617 PPARGC1BQ86YN6 1023 aaKnown RBP10.1□□□□□ -0.79
ARHGEF6-201ENST00000250617 MYO15BQ96JP2 1530 aa10.07□□□□□ -0.8
ARHGEF6-201ENST00000250617 APLP2Q06481 763 aa10.05□□□□□ -0.8
ARHGEF6-201ENST00000250617 SCRIBQ14160 1630 aa10.05□□□□□ -0.8
ARHGEF6-201ENST00000250617 CCER1Q8TC90 406 aaPredicted RBP10.05□□□□□ -0.8
ARHGEF6-201ENST00000250617 UBTFP17480 764 aaKnown RBP10.04□□□□□ -0.8
ARHGEF6-201ENST00000250617 RANGAP1P46060 587 aaPredicted RBP10□□□□□ -0.81
ARHGEF6-201ENST00000250617 DCAF1Q9Y4B6 1507 aa9.97□□□□□ -0.81
ARHGEF6-201ENST00000250617 RSF1Q96T23 1441 aaPredicted RBP9.9□□□□□ -0.82
ARHGEF6-201ENST00000250617 PABPN1Q86U42 306 aaKnown RBP eCLIP9.89□□□□□ -0.83
ARHGEF6-201ENST00000250617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.85□□□□□ -0.83
ARHGEF6-201ENST00000250617 CENPBP07199 599 aaPredicted RBP9.83□□□□□ -0.84
ARHGEF6-201ENST00000250617 NACADO15069 1562 aa9.77□□□□□ -0.85
ARHGEF6-201ENST00000250617 HNRNPUL2Q1KMD3 747 aaKnown RBP9.77□□□□□ -0.85
ARHGEF6-201ENST00000250617 RB1CC1Q8TDY2 1594 aa9.74□□□□□ -0.85
ARHGEF6-201ENST00000250617 CECR2Q9BXF3 1484 aa9.73□□□□□ -0.85
ARHGEF6-201ENST00000250617 ATP1B4Q9UN42 357 aaPredicted RBP9.73□□□□□ -0.85
ARHGEF6-201ENST00000250617 YTHDC1Q96MU7 727 aaKnown RBP9.73□□□□□ -0.85
ARHGEF6-201ENST00000250617 CSRNP3Q8WYN3 585 aa9.72□□□□□ -0.85
ARHGEF6-201ENST00000250617 DIEXFQ68CQ4 756 aaKnown RBP9.68□□□□□ -0.86
ARHGEF6-201ENST00000250617 PELP1Q8IZL8 1130 aaKnown RBP9.65□□□□□ -0.86
ARHGEF6-201ENST00000250617 MROH2BQ7Z745 1585 aa9.65□□□□□ -0.86
ARHGEF6-201ENST00000250617 ITGAEP38570 1179 aa9.65□□□□□ -0.86
ARHGEF6-201ENST00000250617 BAZ1AQ9NRL2 1556 aaPredicted RBP9.62□□□□□ -0.87
ARHGEF6-201ENST00000250617 WIZO95785 1651 aa9.57□□□□□ -0.88
ARHGEF6-201ENST00000250617 CEP162Q5TB80 1403 aa9.55□□□□□ -0.88
ARHGEF6-201ENST00000250617 ZNF316A6NFI3 1004 aaPredicted RBP9.54□□□□□ -0.88
ARHGEF6-201ENST00000250617 EEA1Q15075 1411 aa9.52□□□□□ -0.89
ARHGEF6-201ENST00000250617 WRNQ14191 1432 aaPredicted RBP eCLIP9.51□□□□□ -0.89
ARHGEF6-201ENST00000250617 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
ARHGEF6-201ENST00000250617 CCDC88BA6NC98 1476 aa9.5□□□□□ -0.89
ARHGEF6-201ENST00000250617 GOLGA3Q08378 1498 aa9.5□□□□□ -0.89
ARHGEF6-201ENST00000250617 TNIKQ9UKE5 1360 aa9.5□□□□□ -0.89
ARHGEF6-201ENST00000250617 GTF3C3Q9Y5Q9 886 aa9.49□□□□□ -0.89
ARHGEF6-201ENST00000250617 SOGA1O94964 1423 aa9.49□□□□□ -0.89
ARHGEF6-201ENST00000250617 ACIN1Q9UKV3 1341 aaKnown RBP9.48□□□□□ -0.89
ARHGEF6-201ENST00000250617 CLIP1P30622 1438 aa9.48□□□□□ -0.89
ARHGEF6-201ENST00000250617 FAM50AQ14320 339 aaKnown RBP9.47□□□□□ -0.89
ARHGEF6-201ENST00000250617 BAZ1BQ9UIG0 1483 aaKnown RBP9.46□□□□□ -0.9
ARHGEF6-201ENST00000250617 TOP2AP11388 1531 aaKnown RBP9.45□□□□□ -0.9
ARHGEF6-201ENST00000250617 CEP164Q9UPV0 1460 aa9.42□□□□□ -0.9
ARHGEF6-201ENST00000250617 P3H3Q8IVL6 736 aa9.41□□□□□ -0.9
ARHGEF6-201ENST00000250617 SCAF1Q9H7N4 1312 aaKnown RBP9.41□□□□□ -0.9
ARHGEF6-201ENST00000250617 SMARCA4P51532 1647 aa9.4□□□□□ -0.9
ARHGEF6-201ENST00000250617 NEFLP07196 543 aa9.4□□□□□ -0.9
ARHGEF6-201ENST00000250617 NEUROD1Q13562 356 aa9.4□□□□□ -0.9
ARHGEF6-201ENST00000250617 RUSC2Q8N2Y8 1516 aa9.33□□□□□ -0.92
ARHGEF6-201ENST00000250617 SMARCA2P51531 1590 aa9.33□□□□□ -0.92
ARHGEF6-201ENST00000250617 MIER1Q8N108 512 aa9.32□□□□□ -0.92
ARHGEF6-201ENST00000250617 KIF27Q86VH2 1401 aa9.31□□□□□ -0.92
ARHGEF6-201ENST00000250617 VPS8Q8N3P4 1428 aa9.29□□□□□ -0.92
ARHGEF6-201ENST00000250617 TRIM52Q96A61 297 aa9.28□□□□□ -0.92
ARHGEF6-201ENST00000250617 ATAD2BQ9ULI0 1458 aa9.27□□□□□ -0.93
ARHGEF6-201ENST00000250617 MYT1Q01538 1121 aa9.26□□□□□ -0.93
ARHGEF6-201ENST00000250617 POLR3GLQ9BT43 218 aa9.25□□□□□ -0.93
ARHGEF6-201ENST00000250617 ARID3CA6NKF2 412 aa9.24□□□□□ -0.93
ARHGEF6-201ENST00000250617 ANP32CO43423 234 aa9.24□□□□□ -0.93
ARHGEF6-201ENST00000250617 RAPGEF2Q9Y4G8 1499 aa9.24□□□□□ -0.93
ARHGEF6-201ENST00000250617 ERICH6Q7L0X2 663 aa9.23□□□□□ -0.93
ARHGEF6-201ENST00000250617 CNGB1Q14028 1251 aaPredicted RBP9.22□□□□□ -0.93
ARHGEF6-201ENST00000250617 BCANQ96GW7 911 aa9.22□□□□□ -0.93
ARHGEF6-201ENST00000250617 KANK4Q5T7N3 995 aaPredicted RBP9.21□□□□□ -0.94
ARHGEF6-201ENST00000250617 DDX10Q13206 875 aaKnown RBP9.2□□□□□ -0.94
ARHGEF6-201ENST00000250617 CUX2O14529 1486 aa9.2□□□□□ -0.94
ARHGEF6-201ENST00000250617 TONSLQ96HA7 1378 aa9.19□□□□□ -0.94
ARHGEF6-201ENST00000250617 CLSPNQ9HAW4 1339 aa9.18□□□□□ -0.94
ARHGEF6-201ENST00000250617 CCNB3Q8WWL7 1395 aa9.18□□□□□ -0.94
ARHGEF6-201ENST00000250617 MTUS2Q5JR59 1369 aa9.18□□□□□ -0.94
ARHGEF6-201ENST00000250617 CARMIL1Q5VZK9 1371 aa9.17□□□□□ -0.94
ARHGEF6-201ENST00000250617 FBLN2P98095 1184 aa9.15□□□□□ -0.94
ARHGEF6-201ENST00000250617 HIRIP3Q9BW71 556 aaPredicted RBP9.15□□□□□ -0.95
ARHGEF6-201ENST00000250617 CHIC2Q9UKJ5 165 aa9.14□□□□□ -0.95
ARHGEF6-201ENST00000250617 SYNJ1O43426 1573 aa9.14□□□□□ -0.95
ARHGEF6-201ENST00000250617 ZNF326Q5BKZ1 582 aaKnown RBP9.13□□□□□ -0.95
ARHGEF6-201ENST00000250617 SIN3AQ96ST3 1273 aa9.11□□□□□ -0.95
ARHGEF6-201ENST00000250617 FHAD1B1AJZ9 1412 aa9.11□□□□□ -0.95
ARHGEF6-201ENST00000250617 KIF21BO75037 1637 aa9.11□□□□□ -0.95
ARHGEF6-201ENST00000250617 FKBP8Q14318 412 aa9.1□□□□□ -0.95
ARHGEF6-201ENST00000250617 ZNF777Q9ULD5 760 aaPredicted RBP9.1□□□□□ -0.95
ARHGEF6-201ENST00000250617 CDK11AQ9UQ88 783 aaPredicted RBP9.09□□□□□ -0.95
ARHGEF6-201ENST00000250617 RRP7BPQ9NSQ0 103 aa9.08□□□□□ -0.96
ARHGEF6-201ENST00000250617 CADPSQ9ULU8 1353 aa9.08□□□□□ -0.96
ARHGEF6-201ENST00000250617 BICRAQ9NZM4 1560 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms