RNA–Protein interactions for RNA: ENST00000630920.1

CCAT2-201, colon cancer associated transcript 2, humanhuman

BASIC

Gene CCAT2, Length 1,752 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAT2-201ENST00000630920 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
CCAT2-201ENST00000630920 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
CCAT2-201ENST00000630920 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
CCAT2-201ENST00000630920 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
CCAT2-201ENST00000630920 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
CCAT2-201ENST00000630920 ADRA2BP18089 450 aa15.83■□□□□ 0.12
CCAT2-201ENST00000630920 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
CCAT2-201ENST00000630920 FOXD1Q16676 465 aa15.64■□□□□ 0.09
CCAT2-201ENST00000630920 KCNA4P22459 653 aa15.47■□□□□ 0.07
CCAT2-201ENST00000630920 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
CCAT2-201ENST00000630920 PPP4R3CPQ6ZMV5 832 aa14.9□□□□□ -0.02
CCAT2-201ENST00000630920 PIAS4Q8N2W9 510 aaPredicted RBP14.9□□□□□ -0.02
CCAT2-201ENST00000630920 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
CCAT2-201ENST00000630920 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
CCAT2-201ENST00000630920 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
CCAT2-201ENST00000630920 NPM3O75607 178 aaKnown RBP14.55□□□□□ -0.08
CCAT2-201ENST00000630920 ZBTB22O15209 634 aa14.3□□□□□ -0.12
CCAT2-201ENST00000630920 CNKSR2Q8WXI2 1034 aa14.28□□□□□ -0.12
CCAT2-201ENST00000630920 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
CCAT2-201ENST00000630920 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
CCAT2-201ENST00000630920 MSH5O43196 834 aa14.02□□□□□ -0.16
CCAT2-201ENST00000630920 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
CCAT2-201ENST00000630920 FOXD4L1Q9NU39 408 aa13.94□□□□□ -0.18
CCAT2-201ENST00000630920 RNF216Q9NWF9 866 aaPredicted RBP13.83□□□□□ -0.19
CCAT2-201ENST00000630920 HOXD11P31277 338 aaPredicted RBP13.6□□□□□ -0.23
CCAT2-201ENST00000630920 DMRT2Q9Y5R5 561 aa13.6□□□□□ -0.23
CCAT2-201ENST00000630920 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
CCAT2-201ENST00000630920 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
CCAT2-201ENST00000630920 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
CCAT2-201ENST00000630920 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
CCAT2-201ENST00000630920 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
CCAT2-201ENST00000630920 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
CCAT2-201ENST00000630920 FKBP8Q14318 412 aa13.26□□□□□ -0.29
CCAT2-201ENST00000630920 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
CCAT2-201ENST00000630920 DCAF8L1A6NGE4 600 aa12.97□□□□□ -0.33
CCAT2-201ENST00000630920 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCAT2-201ENST00000630920 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
CCAT2-201ENST00000630920 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
CCAT2-201ENST00000630920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
CCAT2-201ENST00000630920 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
CCAT2-201ENST00000630920 POTEDQ86YR6 584 aa12.69□□□□□ -0.38
CCAT2-201ENST00000630920 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
CCAT2-201ENST00000630920 MKRN4PQ13434 485 aaPredicted RBP12.53□□□□□ -0.4
CCAT2-201ENST00000630920 SPDYE4A6NLX3 237 aa12.52□□□□□ -0.41
CCAT2-201ENST00000630920 FBXO3Q9UK99 471 aa12.49□□□□□ -0.41
CCAT2-201ENST00000630920 APLP2Q06481 763 aa12.46□□□□□ -0.41
CCAT2-201ENST00000630920 PROM2Q8N271 834 aa12.45□□□□□ -0.42
CCAT2-201ENST00000630920 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
CCAT2-201ENST00000630920 SPINK5Q9NQ38 1064 aaPredicted RBP12.34□□□□□ -0.43
CCAT2-201ENST00000630920 IFNLR1Q8IU57 520 aaPredicted RBP12.33□□□□□ -0.44
CCAT2-201ENST00000630920 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
CCAT2-201ENST00000630920 PLCB2Q00722 1185 aa12.32□□□□□ -0.44
CCAT2-201ENST00000630920 FBLN2P98095 1184 aa12.3□□□□□ -0.44
CCAT2-201ENST00000630920 POLA2Q14181 598 aa12.3□□□□□ -0.44
CCAT2-201ENST00000630920 PKD2Q13563 968 aa12.2□□□□□ -0.46
CCAT2-201ENST00000630920 CAPN15O75808 1086 aa12.18□□□□□ -0.46
CCAT2-201ENST00000630920 DCAF8L2P0C7V8 631 aa12.18□□□□□ -0.46
CCAT2-201ENST00000630920 RNF39Q9H2S5 420 aa12.17□□□□□ -0.46
CCAT2-201ENST00000630920 HAP1P54257 671 aaPredicted RBP12.12□□□□□ -0.47
CCAT2-201ENST00000630920 ABCB7O75027 752 aa12.06□□□□□ -0.48
CCAT2-201ENST00000630920 ZBTB12Q9Y330 459 aaPredicted RBP12.02□□□□□ -0.48
CCAT2-201ENST00000630920 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
CCAT2-201ENST00000630920 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
CCAT2-201ENST00000630920 SPOCK2Q92563 424 aa11.95□□□□□ -0.5
CCAT2-201ENST00000630920 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
CCAT2-201ENST00000630920 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
CCAT2-201ENST00000630920 NPM1P06748 294 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCAT2-201ENST00000630920 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
CCAT2-201ENST00000630920 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
CCAT2-201ENST00000630920 BCANQ96GW7 911 aa11.91□□□□□ -0.5
CCAT2-201ENST00000630920 OSCARQ8IYS5 282 aa11.88□□□□□ -0.51
CCAT2-201ENST00000630920 BBXQ8WY36 941 aaPredicted RBP11.87□□□□□ -0.51
CCAT2-201ENST00000630920 PRKCSHP14314 528 aaPredicted RBP11.86□□□□□ -0.51
CCAT2-201ENST00000630920 KDM2AQ9Y2K7 1162 aa11.86□□□□□ -0.51
CCAT2-201ENST00000630920 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
CCAT2-201ENST00000630920 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
CCAT2-201ENST00000630920 RGL2O15211 777 aa11.84□□□□□ -0.51
CCAT2-201ENST00000630920 DSG3P32926 999 aa11.84□□□□□ -0.51
CCAT2-201ENST00000630920 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
CCAT2-201ENST00000630920 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
CCAT2-201ENST00000630920 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
CCAT2-201ENST00000630920 MYT1Q01538 1121 aa11.82□□□□□ -0.52
CCAT2-201ENST00000630920 SPDYE2BA6NHP3 402 aa11.81□□□□□ -0.52
CCAT2-201ENST00000630920 SPDYE6P0CI01 402 aa11.81□□□□□ -0.52
CCAT2-201ENST00000630920 SPDYE2Q495Y8 402 aa11.81□□□□□ -0.52
CCAT2-201ENST00000630920 PABPN1Q86U42 306 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCAT2-201ENST00000630920 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
CCAT2-201ENST00000630920 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
CCAT2-201ENST00000630920 MIER1Q8N108 512 aa11.77□□□□□ -0.52
CCAT2-201ENST00000630920 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
CCAT2-201ENST00000630920 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
CCAT2-201ENST00000630920 CIZ1Q9ULV3 898 aaPredicted RBP11.67□□□□□ -0.54
CCAT2-201ENST00000630920 CHGAP10645 457 aaKnown RBP11.66□□□□□ -0.54
CCAT2-201ENST00000630920 TPRNQ4KMQ1 711 aa11.63□□□□□ -0.55
CCAT2-201ENST00000630920 ZBTB47Q9UFB7 747 aaPredicted RBP11.59□□□□□ -0.55
CCAT2-201ENST00000630920 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
CCAT2-201ENST00000630920 RNF25Q96BH1 459 aaPredicted RBP11.56□□□□□ -0.56
CCAT2-201ENST00000630920 HS6ST3Q8IZP7 471 aa11.53□□□□□ -0.56
CCAT2-201ENST00000630920 TRIM41Q8WV44 630 aa11.5□□□□□ -0.57
CCAT2-201ENST00000630920 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms