RNA–Protein interactions for RNA: ENST00000555316.1

AL161757.3-201, humanhuman

TSL 3 BASIC

Gene AL161757.3, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL161757.3-201ENST00000555316 AEBP2Q6ZN18 517 aaPredicted RBP27.66■■■□□ 2.02
AL161757.3-201ENST00000555316 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
AL161757.3-201ENST00000555316 SENP3Q9H4L4 574 aaPredicted RBP23.49■■□□□ 1.35
AL161757.3-201ENST00000555316 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
AL161757.3-201ENST00000555316 FOXD1Q16676 465 aa22.03■■□□□ 1.12
AL161757.3-201ENST00000555316 POTEDQ86YR6 584 aa20.68■□□□□ 0.9
AL161757.3-201ENST00000555316 MSH5O43196 834 aa20.61■□□□□ 0.89
AL161757.3-201ENST00000555316 PLPPR3Q6T4P5 718 aa20.53■□□□□ 0.88
AL161757.3-201ENST00000555316 PIAS4Q8N2W9 510 aaPredicted RBP20.47■□□□□ 0.87
AL161757.3-201ENST00000555316 PPP6R1Q9UPN7 881 aa20.43■□□□□ 0.86
AL161757.3-201ENST00000555316 ADRA2BP18089 450 aa20.33■□□□□ 0.85
AL161757.3-201ENST00000555316 MAPK8IP2Q13387 824 aaPredicted RBP18.78■□□□□ 0.6
AL161757.3-201ENST00000555316 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
AL161757.3-201ENST00000555316 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
AL161757.3-201ENST00000555316 PPP4R3CPQ6ZMV5 832 aa18■□□□□ 0.47
AL161757.3-201ENST00000555316 CACNB1Q02641 598 aaPredicted RBP17.9■□□□□ 0.46
AL161757.3-201ENST00000555316 DCAF8L1A6NGE4 600 aa17.89■□□□□ 0.45
AL161757.3-201ENST00000555316 HOXD11P31277 338 aaPredicted RBP17.83■□□□□ 0.44
AL161757.3-201ENST00000555316 CNKSR2Q8WXI2 1034 aa17.68■□□□□ 0.42
AL161757.3-201ENST00000555316 RNF39Q9H2S5 420 aa17.62■□□□□ 0.41
AL161757.3-201ENST00000555316 RNF216Q9NWF9 866 aaPredicted RBP17.6■□□□□ 0.41
AL161757.3-201ENST00000555316 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
AL161757.3-201ENST00000555316 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
AL161757.3-201ENST00000555316 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
AL161757.3-201ENST00000555316 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
AL161757.3-201ENST00000555316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.97■□□□□ 0.31
AL161757.3-201ENST00000555316 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
AL161757.3-201ENST00000555316 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
AL161757.3-201ENST00000555316 KCNA4P22459 653 aa16.47■□□□□ 0.23
AL161757.3-201ENST00000555316 CAPN15O75808 1086 aa16.43■□□□□ 0.22
AL161757.3-201ENST00000555316 DSG3P32926 999 aa16.42■□□□□ 0.22
AL161757.3-201ENST00000555316 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
AL161757.3-201ENST00000555316 TRHP20396 242 aaPredicted RBP16.13■□□□□ 0.17
AL161757.3-201ENST00000555316 POTEHQ6S545 545 aa16.13■□□□□ 0.17
AL161757.3-201ENST00000555316 ABCB7O75027 752 aa16.09■□□□□ 0.17
AL161757.3-201ENST00000555316 NISCHQ9Y2I1 1504 aa16.01■□□□□ 0.15
AL161757.3-201ENST00000555316 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
AL161757.3-201ENST00000555316 APLP2Q06481 763 aa15.97■□□□□ 0.15
AL161757.3-201ENST00000555316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
AL161757.3-201ENST00000555316 HNRNPUL2Q1KMD3 747 aaKnown RBP15.92■□□□□ 0.14
AL161757.3-201ENST00000555316 SAMD1Q6SPF0 538 aaPredicted RBP15.86■□□□□ 0.13
AL161757.3-201ENST00000555316 MYCNP04198 464 aaPredicted RBP15.67■□□□□ 0.1
AL161757.3-201ENST00000555316 POLA2Q14181 598 aa15.62■□□□□ 0.09
AL161757.3-201ENST00000555316 RBM42Q9BTD8 480 aaKnown RBP15.58■□□□□ 0.08
AL161757.3-201ENST00000555316 ATF5Q9Y2D1 282 aaPredicted RBP15.46■□□□□ 0.07
AL161757.3-201ENST00000555316 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
AL161757.3-201ENST00000555316 CHRDL2Q6WN34 429 aa15.42■□□□□ 0.06
AL161757.3-201ENST00000555316 FOXD4L1Q9NU39 408 aa15.38■□□□□ 0.05
AL161757.3-201ENST00000555316 AKT1S1Q96B36 256 aa15.19■□□□□ 0.02
AL161757.3-201ENST00000555316 ZBTB22O15209 634 aa15.18■□□□□ 0.02
AL161757.3-201ENST00000555316 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
AL161757.3-201ENST00000555316 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
AL161757.3-201ENST00000555316 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
AL161757.3-201ENST00000555316 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
AL161757.3-201ENST00000555316 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
AL161757.3-201ENST00000555316 PITPNM1O00562 1244 aa14.97□□□□□ -0.01
AL161757.3-201ENST00000555316 ATXN8OSP0DMR3 200 aa14.87□□□□□ -0.03
AL161757.3-201ENST00000555316 FXR2P51116 673 aaKnown RBP eCLIP14.87□□□□□ -0.03
AL161757.3-201ENST00000555316 HAX1O00165 279 aa14.8□□□□□ -0.04
AL161757.3-201ENST00000555316 SPDYE2BA6NHP3 402 aa14.73□□□□□ -0.05
AL161757.3-201ENST00000555316 SPDYE6P0CI01 402 aa14.73□□□□□ -0.05
AL161757.3-201ENST00000555316 SPDYE2Q495Y8 402 aa14.73□□□□□ -0.05
AL161757.3-201ENST00000555316 FBLN2P98095 1184 aa14.71□□□□□ -0.05
AL161757.3-201ENST00000555316 MKRN4PQ13434 485 aaPredicted RBP14.71□□□□□ -0.05
AL161757.3-201ENST00000555316 EVX2Q03828 476 aa14.7□□□□□ -0.06
AL161757.3-201ENST00000555316 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.08
AL161757.3-201ENST00000555316 PRKAR2AP13861 404 aaKnown RBP14.56□□□□□ -0.08
AL161757.3-201ENST00000555316 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
AL161757.3-201ENST00000555316 SPDYE1Q8NFV5 336 aaPredicted RBP14.54□□□□□ -0.08
AL161757.3-201ENST00000555316 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
AL161757.3-201ENST00000555316 C19orf67A6NJJ6 358 aa14.4□□□□□ -0.1
AL161757.3-201ENST00000555316 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
AL161757.3-201ENST00000555316 PABPN1Q86U42 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
AL161757.3-201ENST00000555316 GABBR2O75899 941 aa14.28□□□□□ -0.12
AL161757.3-201ENST00000555316 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
AL161757.3-201ENST00000555316 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.13
AL161757.3-201ENST00000555316 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
AL161757.3-201ENST00000555316 ABCC9O60706 1549 aa14.1□□□□□ -0.15
AL161757.3-201ENST00000555316 FARP1Q9Y4F1 1045 aaPredicted RBP14.08□□□□□ -0.16
AL161757.3-201ENST00000555316 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
AL161757.3-201ENST00000555316 LHX8Q68G74 356 aa14.05□□□□□ -0.16
AL161757.3-201ENST00000555316 POTEIP0CG38 1075 aa14.03□□□□□ -0.16
AL161757.3-201ENST00000555316 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
AL161757.3-201ENST00000555316 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
AL161757.3-201ENST00000555316 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
AL161757.3-201ENST00000555316 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
AL161757.3-201ENST00000555316 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
AL161757.3-201ENST00000555316 CLCN6P51797 869 aa13.79□□□□□ -0.2
AL161757.3-201ENST00000555316 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
AL161757.3-201ENST00000555316 DCBLD2Q96PD2 775 aa13.78□□□□□ -0.2
AL161757.3-201ENST00000555316 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
AL161757.3-201ENST00000555316 PHF12Q96QT6 1004 aa13.67□□□□□ -0.22
AL161757.3-201ENST00000555316 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
AL161757.3-201ENST00000555316 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
AL161757.3-201ENST00000555316 POTEB2H3BUK9 544 aa13.57□□□□□ -0.24
AL161757.3-201ENST00000555316 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
AL161757.3-201ENST00000555316 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
AL161757.3-201ENST00000555316 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
AL161757.3-201ENST00000555316 DCAF8L2P0C7V8 631 aa13.5□□□□□ -0.25
AL161757.3-201ENST00000555316 RB1CC1Q8TDY2 1594 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms