RNA–Protein interactions for RNA: ENST00000540313.1

RTL9-203, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 2 BASIC

Gene RTL9, Length 5,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-203ENST00000540313 DCAF8L2P0C7V8 631 aa11.37□□□□□ -0.59
RTL9-203ENST00000540313 NISCHQ9Y2I1 1504 aa11.34□□□□□ -0.59
RTL9-203ENST00000540313 SUPT5HO00267 1087 aaKnown RBP10.68□□□□□ -0.7
RTL9-203ENST00000540313 FAM9AQ8IZU1 332 aaPredicted RBP10.59□□□□□ -0.71
RTL9-203ENST00000540313 SHROOM4Q9ULL8 1493 aa10.46□□□□□ -0.73
RTL9-203ENST00000540313 PELP1Q8IZL8 1130 aaKnown RBP10.33□□□□□ -0.76
RTL9-203ENST00000540313 EHMT2Q96KQ7 1210 aa10.25□□□□□ -0.77
RTL9-203ENST00000540313 PCGF6Q9BYE7 350 aa10.23□□□□□ -0.77
RTL9-203ENST00000540313 APLP2Q06481 763 aa10.17□□□□□ -0.78
RTL9-203ENST00000540313 ZEB1P37275 1124 aaPredicted RBP10.1□□□□□ -0.79
RTL9-203ENST00000540313 CENPBP07199 599 aaPredicted RBP10.08□□□□□ -0.8
RTL9-203ENST00000540313 MYT1Q01538 1121 aa9.99□□□□□ -0.81
RTL9-203ENST00000540313 TTBK1Q5TCY1 1321 aaPredicted RBP9.96□□□□□ -0.81
RTL9-203ENST00000540313 CCER1Q8TC90 406 aaPredicted RBP9.95□□□□□ -0.82
RTL9-203ENST00000540313 ERICH6Q7L0X2 663 aa9.9□□□□□ -0.83
RTL9-203ENST00000540313 HRCP23327 699 aa9.89□□□□□ -0.83
RTL9-203ENST00000540313 TRIM41Q8WV44 630 aa9.89□□□□□ -0.83
RTL9-203ENST00000540313 ABCC9O60706 1549 aa9.86□□□□□ -0.83
RTL9-203ENST00000540313 CCDC180Q9P1Z9 1646 aa9.84□□□□□ -0.83
RTL9-203ENST00000540313 TRIM26Q12899 539 aaPredicted RBP9.81□□□□□ -0.84
RTL9-203ENST00000540313 YTHDC1Q96MU7 727 aaKnown RBP9.8□□□□□ -0.84
RTL9-203ENST00000540313 ATP1B4Q9UN42 357 aaPredicted RBP9.78□□□□□ -0.84
RTL9-203ENST00000540313 NEFLP07196 543 aa9.74□□□□□ -0.85
RTL9-203ENST00000540313 RANGAP1P46060 587 aaPredicted RBP9.73□□□□□ -0.85
RTL9-203ENST00000540313 UBTFP17480 764 aaKnown RBP9.7□□□□□ -0.86
RTL9-203ENST00000540313 MYT1LQ9UL68 1186 aa9.69□□□□□ -0.86
RTL9-203ENST00000540313 PPARGC1BQ86YN6 1023 aaKnown RBP9.68□□□□□ -0.86
RTL9-203ENST00000540313 CHIC1Q5VXU3 224 aa9.64□□□□□ -0.87
RTL9-203ENST00000540313 PABPN1Q86U42 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
RTL9-203ENST00000540313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.63□□□□□ -0.87
RTL9-203ENST00000540313 HNRNPUL2Q1KMD3 747 aaKnown RBP9.63□□□□□ -0.87
RTL9-203ENST00000540313 LOC105371045A0A1W2PR82 267 aa9.61□□□□□ -0.87
RTL9-203ENST00000540313 DIEXFQ68CQ4 756 aaKnown RBP9.5□□□□□ -0.89
RTL9-203ENST00000540313 RB1CC1Q8TDY2 1594 aa9.45□□□□□ -0.9
RTL9-203ENST00000540313 FBLN2P98095 1184 aa9.42□□□□□ -0.9
RTL9-203ENST00000540313 ZCCHC6Q5VYS8 1495 aaKnown RBP9.41□□□□□ -0.9
RTL9-203ENST00000540313 ITGAEP38570 1179 aa9.41□□□□□ -0.9
RTL9-203ENST00000540313 GTF3C3Q9Y5Q9 886 aa9.41□□□□□ -0.9
RTL9-203ENST00000540313 DAXXQ9UER7 740 aaPredicted RBP9.4□□□□□ -0.91
RTL9-203ENST00000540313 NACADO15069 1562 aa9.39□□□□□ -0.91
RTL9-203ENST00000540313 NPM1P06748 294 aaKnown RBP eCLIP9.38□□□□□ -0.91
RTL9-203ENST00000540313 SCRIBQ14160 1630 aa9.33□□□□□ -0.92
RTL9-203ENST00000540313 RTL5Q5HYW3 569 aaPredicted RBP9.31□□□□□ -0.92
RTL9-203ENST00000540313 POLR3GLQ9BT43 218 aa9.31□□□□□ -0.92
RTL9-203ENST00000540313 ACIN1Q9UKV3 1341 aaKnown RBP9.31□□□□□ -0.92
RTL9-203ENST00000540313 ESF1Q9H501 851 aaKnown RBP9.31□□□□□ -0.92
RTL9-203ENST00000540313 DCAF1Q9Y4B6 1507 aa9.29□□□□□ -0.92
RTL9-203ENST00000540313 CDK11AQ9UQ88 783 aaPredicted RBP9.28□□□□□ -0.92
RTL9-203ENST00000540313 ZNF316A6NFI3 1004 aaPredicted RBP9.27□□□□□ -0.93
RTL9-203ENST00000540313 MYO15BQ96JP2 1530 aa9.27□□□□□ -0.93
RTL9-203ENST00000540313 BCANQ96GW7 911 aa9.26□□□□□ -0.93
RTL9-203ENST00000540313 CNGB1Q14028 1251 aaPredicted RBP9.24□□□□□ -0.93
RTL9-203ENST00000540313 ANP32CO43423 234 aa9.18□□□□□ -0.94
RTL9-203ENST00000540313 FAM50AQ14320 339 aaKnown RBP9.18□□□□□ -0.94
RTL9-203ENST00000540313 NEUROD1Q13562 356 aa9.17□□□□□ -0.94
RTL9-203ENST00000540313 ERCC6Q03468 1493 aa9.17□□□□□ -0.94
RTL9-203ENST00000540313 SLC4A1APQ9BWU0 796 aaKnown RBP9.16□□□□□ -0.94
RTL9-203ENST00000540313 CLSPNQ9HAW4 1339 aa9.14□□□□□ -0.95
RTL9-203ENST00000540313 CHMP7Q8WUX9 453 aaPredicted RBP9.14□□□□□ -0.95
RTL9-203ENST00000540313 TRIM52Q96A61 297 aa9.12□□□□□ -0.95
RTL9-203ENST00000540313 SCAF1Q9H7N4 1312 aaKnown RBP9.09□□□□□ -0.95
RTL9-203ENST00000540313 STAG3Q9UJ98 1225 aa9.08□□□□□ -0.96
RTL9-203ENST00000540313 BAZ1BQ9UIG0 1483 aaKnown RBP9.05□□□□□ -0.96
RTL9-203ENST00000540313 ANP32AP39687 249 aaKnown RBP9.04□□□□□ -0.96
RTL9-203ENST00000540313 FKBP8Q14318 412 aa9.03□□□□□ -0.96
RTL9-203ENST00000540313 CSRNP3Q8WYN3 585 aa9.03□□□□□ -0.96
RTL9-203ENST00000540313 NEFMP07197 916 aa9.01□□□□□ -0.97
RTL9-203ENST00000540313 ZNF777Q9ULD5 760 aaPredicted RBP9□□□□□ -0.97
RTL9-203ENST00000540313 ZNF326Q5BKZ1 582 aaKnown RBP8.99□□□□□ -0.97
RTL9-203ENST00000540313 P3H3Q8IVL6 736 aa8.95□□□□□ -0.98
RTL9-203ENST00000540313 NPM2Q86SE8 214 aaKnown RBP8.95□□□□□ -0.98
RTL9-203ENST00000540313 PDS5BQ9NTI5 1447 aa8.95□□□□□ -0.98
RTL9-203ENST00000540313 MIER1Q8N108 512 aa8.93□□□□□ -0.98
RTL9-203ENST00000540313 ARID3CA6NKF2 412 aa8.92□□□□□ -0.98
RTL9-203ENST00000540313 TSPY4P0CV99 314 aa8.92□□□□□ -0.98
RTL9-203ENST00000540313 TSPY10P0CW01 314 aa8.92□□□□□ -0.98
RTL9-203ENST00000540313 HNRNPUQ00839 825 aaKnown RBP eCLIP8.92□□□□□ -0.98
RTL9-203ENST00000540313 TRHP20396 242 aaPredicted RBP8.92□□□□□ -0.98
RTL9-203ENST00000540313 CANXP27824 592 aaKnown RBP8.92□□□□□ -0.98
RTL9-203ENST00000540313 BAZ1AQ9NRL2 1556 aaPredicted RBP8.91□□□□□ -0.98
RTL9-203ENST00000540313 DDX10Q13206 875 aaKnown RBP8.91□□□□□ -0.98
RTL9-203ENST00000540313 PLPPR3Q6T4P5 718 aa8.91□□□□□ -0.98
RTL9-203ENST00000540313 PLEKHD1A6NEE1 506 aa8.9□□□□□ -0.98
RTL9-203ENST00000540313 TONSLQ96HA7 1378 aa8.9□□□□□ -0.98
RTL9-203ENST00000540313 ARID4BQ4LE39 1312 aaPredicted RBP8.9□□□□□ -0.98
RTL9-203ENST00000540313 SMARCA2P51531 1590 aa8.9□□□□□ -0.99
RTL9-203ENST00000540313 CHGAP10645 457 aaKnown RBP8.89□□□□□ -0.99
RTL9-203ENST00000540313 ZBTB47Q9UFB7 747 aaPredicted RBP8.89□□□□□ -0.99
RTL9-203ENST00000540313 EIF5BO60841 1220 aaKnown RBP8.88□□□□□ -0.99
RTL9-203ENST00000540313 RSF1Q96T23 1441 aaPredicted RBP8.87□□□□□ -0.99
RTL9-203ENST00000540313 FAM9BQ8IZU0 186 aa8.86□□□□□ -0.99
RTL9-203ENST00000540313 EEA1Q15075 1411 aa8.86□□□□□ -0.99
RTL9-203ENST00000540313 NBR1Q14596 966 aa8.85□□□□□ -0.99
RTL9-203ENST00000540313 PPP1R15AO75807 674 aaPredicted RBP8.84□□□□□ -0.99
RTL9-203ENST00000540313 KIF27Q86VH2 1401 aa8.84□□□□□ -0.99
RTL9-203ENST00000540313 SLC24A1O60721 1099 aa8.83□□□□□ -1
RTL9-203ENST00000540313 CCDC136Q96JN2 1154 aa8.83□□□□□ -1
RTL9-203ENST00000540313 ANP32EQ9BTT0 268 aa8.83□□□□□ -1
RTL9-203ENST00000540313 MTUS2Q5JR59 1369 aa8.82□□□□□ -1
RTL9-203ENST00000540313 CECR2Q9BXF3 1484 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms