RNA–Protein interactions for RNA: ENST00000532510.5

AP002004.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP002004.1, Length 3,530 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002004.1-201ENST00000532510 NISCHQ9Y2I1 1504 aa13.1□□□□□ -0.31
AP002004.1-201ENST00000532510 SHROOM4Q9ULL8 1493 aa11.13□□□□□ -0.63
AP002004.1-201ENST00000532510 ZCCHC6Q5VYS8 1495 aaKnown RBP11.1□□□□□ -0.63
AP002004.1-201ENST00000532510 CCDC180Q9P1Z9 1646 aa11.09□□□□□ -0.63
AP002004.1-201ENST00000532510 SUPT5HO00267 1087 aaKnown RBP10.98□□□□□ -0.65
AP002004.1-201ENST00000532510 AEBP2Q6ZN18 517 aaPredicted RBP10.91□□□□□ -0.66
AP002004.1-201ENST00000532510 CHIC1Q5VXU3 224 aa10.87□□□□□ -0.67
AP002004.1-201ENST00000532510 DCAF1Q9Y4B6 1507 aa10.79□□□□□ -0.68
AP002004.1-201ENST00000532510 DCAF8L2P0C7V8 631 aa10.74□□□□□ -0.69
AP002004.1-201ENST00000532510 MYO15BQ96JP2 1530 aa10.71□□□□□ -0.69
AP002004.1-201ENST00000532510 HRCP23327 699 aa10.58□□□□□ -0.72
AP002004.1-201ENST00000532510 PCGF6Q9BYE7 350 aa10.47□□□□□ -0.73
AP002004.1-201ENST00000532510 ABCC9O60706 1549 aa10.46□□□□□ -0.73
AP002004.1-201ENST00000532510 PELP1Q8IZL8 1130 aaKnown RBP10.45□□□□□ -0.74
AP002004.1-201ENST00000532510 LOC105371045A0A1W2PR82 267 aa10.42□□□□□ -0.74
AP002004.1-201ENST00000532510 RSF1Q96T23 1441 aaPredicted RBP10.4□□□□□ -0.74
AP002004.1-201ENST00000532510 SCRIBQ14160 1630 aa10.35□□□□□ -0.75
AP002004.1-201ENST00000532510 MYT1Q01538 1121 aa10.34□□□□□ -0.75
AP002004.1-201ENST00000532510 TRIM26Q12899 539 aaPredicted RBP10.31□□□□□ -0.76
AP002004.1-201ENST00000532510 RB1CC1Q8TDY2 1594 aa10.29□□□□□ -0.76
AP002004.1-201ENST00000532510 PPARGC1BQ86YN6 1023 aaKnown RBP10.28□□□□□ -0.76
AP002004.1-201ENST00000532510 TRIM41Q8WV44 630 aa10.26□□□□□ -0.77
AP002004.1-201ENST00000532510 NACADO15069 1562 aa10.25□□□□□ -0.77
AP002004.1-201ENST00000532510 CECR2Q9BXF3 1484 aa10.19□□□□□ -0.78
AP002004.1-201ENST00000532510 MROH2BQ7Z745 1585 aa10.17□□□□□ -0.78
AP002004.1-201ENST00000532510 ZEB1P37275 1124 aaPredicted RBP10.15□□□□□ -0.79
AP002004.1-201ENST00000532510 FAM9AQ8IZU1 332 aaPredicted RBP10.12□□□□□ -0.79
AP002004.1-201ENST00000532510 WIZO95785 1651 aa10.09□□□□□ -0.79
AP002004.1-201ENST00000532510 BAZ1AQ9NRL2 1556 aaPredicted RBP10.06□□□□□ -0.8
AP002004.1-201ENST00000532510 TTBK1Q5TCY1 1321 aaPredicted RBP10.03□□□□□ -0.8
AP002004.1-201ENST00000532510 EIF4G1Q04637 1599 aaKnown RBP10.03□□□□□ -0.8
AP002004.1-201ENST00000532510 EHMT2Q96KQ7 1210 aa9.98□□□□□ -0.81
AP002004.1-201ENST00000532510 TOP2AP11388 1531 aaKnown RBP9.97□□□□□ -0.81
AP002004.1-201ENST00000532510 CCDC88BA6NC98 1476 aa9.93□□□□□ -0.82
AP002004.1-201ENST00000532510 SMARCA4P51532 1647 aa9.93□□□□□ -0.82
AP002004.1-201ENST00000532510 SMARCA2P51531 1590 aa9.91□□□□□ -0.82
AP002004.1-201ENST00000532510 WRNQ14191 1432 aaPredicted RBP eCLIP9.9□□□□□ -0.82
AP002004.1-201ENST00000532510 ABCC8Q09428 1581 aa9.88□□□□□ -0.83
AP002004.1-201ENST00000532510 EEA1Q15075 1411 aa9.85□□□□□ -0.83
AP002004.1-201ENST00000532510 TNIKQ9UKE5 1360 aa9.85□□□□□ -0.83
AP002004.1-201ENST00000532510 SOGA1O94964 1423 aa9.84□□□□□ -0.83
AP002004.1-201ENST00000532510 CEP162Q5TB80 1403 aa9.84□□□□□ -0.84
AP002004.1-201ENST00000532510 UNC13AQ9UPW8 1703 aa9.83□□□□□ -0.84
AP002004.1-201ENST00000532510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.83□□□□□ -0.84
AP002004.1-201ENST00000532510 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
AP002004.1-201ENST00000532510 CSRNP3Q8WYN3 585 aa9.82□□□□□ -0.84
AP002004.1-201ENST00000532510 PEG3Q9GZU2 1588 aa9.78□□□□□ -0.84
AP002004.1-201ENST00000532510 RUSC2Q8N2Y8 1516 aa9.78□□□□□ -0.84
AP002004.1-201ENST00000532510 SCAF1Q9H7N4 1312 aaKnown RBP9.77□□□□□ -0.84
AP002004.1-201ENST00000532510 BICRAQ9NZM4 1560 aa9.77□□□□□ -0.85
AP002004.1-201ENST00000532510 GOLGA3Q08378 1498 aa9.75□□□□□ -0.85
AP002004.1-201ENST00000532510 UBTFP17480 764 aaKnown RBP9.74□□□□□ -0.85
AP002004.1-201ENST00000532510 PHF23Q9BUL5 403 aaPredicted RBP9.74□□□□□ -0.85
AP002004.1-201ENST00000532510 PABPN1Q86U42 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
AP002004.1-201ENST00000532510 CEP164Q9UPV0 1460 aa9.7□□□□□ -0.86
AP002004.1-201ENST00000532510 DIEXFQ68CQ4 756 aaKnown RBP9.69□□□□□ -0.86
AP002004.1-201ENST00000532510 KIF21BO75037 1637 aa9.68□□□□□ -0.86
AP002004.1-201ENST00000532510 ATAD2BQ9ULI0 1458 aa9.68□□□□□ -0.86
AP002004.1-201ENST00000532510 ACIN1Q9UKV3 1341 aaKnown RBP9.68□□□□□ -0.86
AP002004.1-201ENST00000532510 SYNJ1O43426 1573 aa9.68□□□□□ -0.86
AP002004.1-201ENST00000532510 BAZ1BQ9UIG0 1483 aaKnown RBP9.64□□□□□ -0.87
AP002004.1-201ENST00000532510 CLIP1P30622 1438 aa9.64□□□□□ -0.87
AP002004.1-201ENST00000532510 NEUROD1Q13562 356 aa9.64□□□□□ -0.87
AP002004.1-201ENST00000532510 VPS8Q8N3P4 1428 aa9.62□□□□□ -0.87
AP002004.1-201ENST00000532510 ZNF316A6NFI3 1004 aaPredicted RBP9.62□□□□□ -0.87
AP002004.1-201ENST00000532510 PRKCSHP14314 528 aaPredicted RBP9.62□□□□□ -0.87
AP002004.1-201ENST00000532510 CENPBP07199 599 aaPredicted RBP9.6□□□□□ -0.87
AP002004.1-201ENST00000532510 RAPGEF2Q9Y4G8 1499 aa9.59□□□□□ -0.87
AP002004.1-201ENST00000532510 TOP2BQ02880 1626 aa9.58□□□□□ -0.88
AP002004.1-201ENST00000532510 HNRNPUL2Q1KMD3 747 aaKnown RBP9.56□□□□□ -0.88
AP002004.1-201ENST00000532510 APLP2Q06481 763 aa9.55□□□□□ -0.88
AP002004.1-201ENST00000532510 GTF3C3Q9Y5Q9 886 aa9.54□□□□□ -0.88
AP002004.1-201ENST00000532510 PRXQ9BXM0 1461 aa9.53□□□□□ -0.88
AP002004.1-201ENST00000532510 BIVM-ERCC5R4GMW8 1640 aa9.53□□□□□ -0.88
AP002004.1-201ENST00000532510 ERICH3Q5RHP9 1530 aa9.53□□□□□ -0.88
AP002004.1-201ENST00000532510 NCAPD3P42695 1498 aa9.5□□□□□ -0.89
AP002004.1-201ENST00000532510 ERICH6Q7L0X2 663 aa9.5□□□□□ -0.89
AP002004.1-201ENST00000532510 CLSPNQ9HAW4 1339 aa9.49□□□□□ -0.89
AP002004.1-201ENST00000532510 HMGXB3Q12766 1538 aa9.49□□□□□ -0.89
AP002004.1-201ENST00000532510 ARAP1Q96P48 1450 aa9.48□□□□□ -0.89
AP002004.1-201ENST00000532510 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
AP002004.1-201ENST00000532510 MIER1Q8N108 512 aa9.47□□□□□ -0.89
AP002004.1-201ENST00000532510 CUX1P39880 1505 aa9.46□□□□□ -0.9
AP002004.1-201ENST00000532510 RANGAP1P46060 587 aaPredicted RBP9.46□□□□□ -0.9
AP002004.1-201ENST00000532510 KIF27Q86VH2 1401 aa9.45□□□□□ -0.9
AP002004.1-201ENST00000532510 CFTRP13569 1480 aa9.44□□□□□ -0.9
AP002004.1-201ENST00000532510 DHX57Q6P158 1386 aaKnown RBP9.44□□□□□ -0.9
AP002004.1-201ENST00000532510 KANK4Q5T7N3 995 aaPredicted RBP9.43□□□□□ -0.9
AP002004.1-201ENST00000532510 RRBP1Q9P2E9 1410 aaKnown RBP9.43□□□□□ -0.9
AP002004.1-201ENST00000532510 CUX2O14529 1486 aa9.4□□□□□ -0.9
AP002004.1-201ENST00000532510 YTHDC1Q96MU7 727 aaKnown RBP9.4□□□□□ -0.9
AP002004.1-201ENST00000532510 ARHGAP35Q9NRY4 1499 aa9.39□□□□□ -0.91
AP002004.1-201ENST00000532510 CCNB3Q8WWL7 1395 aa9.36□□□□□ -0.91
AP002004.1-201ENST00000532510 IGF1RP08069 1367 aa9.36□□□□□ -0.91
AP002004.1-201ENST00000532510 MAP3K1Q13233 1512 aa9.34□□□□□ -0.91
AP002004.1-201ENST00000532510 BCL11AQ9H165 835 aa9.33□□□□□ -0.92
AP002004.1-201ENST00000532510 CADPSQ9ULU8 1353 aa9.31□□□□□ -0.92
AP002004.1-201ENST00000532510 CARMIL1Q5VZK9 1371 aa9.3□□□□□ -0.92
AP002004.1-201ENST00000532510 PRDM2Q13029 1718 aa9.3□□□□□ -0.92
AP002004.1-201ENST00000532510 TIAM1Q13009 1591 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms