RNA–Protein interactions for RNA: ENST00000425800.1

LINC00352-201, long intergenic non-protein coding RNA 352, humanhuman

TSL 3 BASIC

Gene LINC00352, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00352-201ENST00000425800 AEBP2Q6ZN18 517 aaPredicted RBP23.32■■□□□ 1.32
LINC00352-201ENST00000425800 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
LINC00352-201ENST00000425800 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
LINC00352-201ENST00000425800 PHF23Q9BUL5 403 aaPredicted RBP19.6■□□□□ 0.73
LINC00352-201ENST00000425800 FOXD1Q16676 465 aa18.57■□□□□ 0.56
LINC00352-201ENST00000425800 PLPPR3Q6T4P5 718 aa17.45■□□□□ 0.38
LINC00352-201ENST00000425800 MSH5O43196 834 aa17.39■□□□□ 0.37
LINC00352-201ENST00000425800 PIAS4Q8N2W9 510 aaPredicted RBP17.31■□□□□ 0.36
LINC00352-201ENST00000425800 POTEDQ86YR6 584 aa17.28■□□□□ 0.36
LINC00352-201ENST00000425800 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
LINC00352-201ENST00000425800 ADRA2BP18089 450 aa17.2■□□□□ 0.34
LINC00352-201ENST00000425800 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
LINC00352-201ENST00000425800 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
LINC00352-201ENST00000425800 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
LINC00352-201ENST00000425800 SCAF1Q9H7N4 1312 aaKnown RBP15.66■□□□□ 0.1
LINC00352-201ENST00000425800 PPP4R3CPQ6ZMV5 832 aa15.3■□□□□ 0.04
LINC00352-201ENST00000425800 DCAF8L1A6NGE4 600 aa15.12■□□□□ 0.01
LINC00352-201ENST00000425800 HOXD11P31277 338 aaPredicted RBP15.09■□□□□ 0.01
LINC00352-201ENST00000425800 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
LINC00352-201ENST00000425800 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
LINC00352-201ENST00000425800 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
LINC00352-201ENST00000425800 RNF39Q9H2S5 420 aa14.85□□□□□ -0.03
LINC00352-201ENST00000425800 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
LINC00352-201ENST00000425800 C1QBPQ07021 282 aaKnown RBP14.59□□□□□ -0.07
LINC00352-201ENST00000425800 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
LINC00352-201ENST00000425800 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
LINC00352-201ENST00000425800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.39□□□□□ -0.11
LINC00352-201ENST00000425800 ABCC9O60706 1549 aa14.25□□□□□ -0.13
LINC00352-201ENST00000425800 KCNA4P22459 653 aa14.08□□□□□ -0.16
LINC00352-201ENST00000425800 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
LINC00352-201ENST00000425800 CCDC180Q9P1Z9 1646 aa14.06□□□□□ -0.16
LINC00352-201ENST00000425800 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
LINC00352-201ENST00000425800 CAPN15O75808 1086 aa13.9□□□□□ -0.18
LINC00352-201ENST00000425800 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
LINC00352-201ENST00000425800 DSG3P32926 999 aa13.86□□□□□ -0.19
LINC00352-201ENST00000425800 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
LINC00352-201ENST00000425800 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
LINC00352-201ENST00000425800 ABCB7O75027 752 aa13.6□□□□□ -0.23
LINC00352-201ENST00000425800 APLP2Q06481 763 aa13.6□□□□□ -0.23
LINC00352-201ENST00000425800 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
LINC00352-201ENST00000425800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
LINC00352-201ENST00000425800 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
LINC00352-201ENST00000425800 RB1CC1Q8TDY2 1594 aa13.5□□□□□ -0.25
LINC00352-201ENST00000425800 POTEHQ6S545 545 aa13.5□□□□□ -0.25
LINC00352-201ENST00000425800 SAMD1Q6SPF0 538 aaPredicted RBP13.5□□□□□ -0.25
LINC00352-201ENST00000425800 NACADO15069 1562 aa13.38□□□□□ -0.27
LINC00352-201ENST00000425800 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC00352-201ENST00000425800 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
LINC00352-201ENST00000425800 POLA2Q14181 598 aa13.25□□□□□ -0.29
LINC00352-201ENST00000425800 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
LINC00352-201ENST00000425800 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
LINC00352-201ENST00000425800 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
LINC00352-201ENST00000425800 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
LINC00352-201ENST00000425800 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
LINC00352-201ENST00000425800 ZCCHC6Q5VYS8 1495 aaKnown RBP13.04□□□□□ -0.32
LINC00352-201ENST00000425800 UNC13AQ9UPW8 1703 aa13.02□□□□□ -0.33
LINC00352-201ENST00000425800 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
LINC00352-201ENST00000425800 BICRAQ9NZM4 1560 aa12.98□□□□□ -0.33
LINC00352-201ENST00000425800 DCAF1Q9Y4B6 1507 aa12.98□□□□□ -0.33
LINC00352-201ENST00000425800 ZBTB22O15209 634 aa12.96□□□□□ -0.33
LINC00352-201ENST00000425800 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
LINC00352-201ENST00000425800 ZBTB12Q9Y330 459 aaPredicted RBP12.91□□□□□ -0.34
LINC00352-201ENST00000425800 SHROOM4Q9ULL8 1493 aa12.86□□□□□ -0.35
LINC00352-201ENST00000425800 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
LINC00352-201ENST00000425800 OSCARQ8IYS5 282 aa12.84□□□□□ -0.35
LINC00352-201ENST00000425800 CECR2Q9BXF3 1484 aa12.83□□□□□ -0.36
LINC00352-201ENST00000425800 CC2D2AQ9P2K1 1620 aa12.77□□□□□ -0.36
LINC00352-201ENST00000425800 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
LINC00352-201ENST00000425800 EIF4G1Q04637 1599 aaKnown RBP12.74□□□□□ -0.37
LINC00352-201ENST00000425800 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
LINC00352-201ENST00000425800 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
LINC00352-201ENST00000425800 PITPNM1O00562 1244 aa12.65□□□□□ -0.38
LINC00352-201ENST00000425800 SP7Q8TDD2 431 aaPredicted RBP12.58□□□□□ -0.4
LINC00352-201ENST00000425800 FXR2P51116 673 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC00352-201ENST00000425800 FBLN2P98095 1184 aa12.55□□□□□ -0.4
LINC00352-201ENST00000425800 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
LINC00352-201ENST00000425800 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
LINC00352-201ENST00000425800 SPDYE2Q495Y8 402 aa12.52□□□□□ -0.41
LINC00352-201ENST00000425800 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
LINC00352-201ENST00000425800 HAX1O00165 279 aa12.46□□□□□ -0.41
LINC00352-201ENST00000425800 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
LINC00352-201ENST00000425800 ZNF692Q9BU19 519 aaPredicted RBP12.37□□□□□ -0.43
LINC00352-201ENST00000425800 NCAPD3P42695 1498 aa12.37□□□□□ -0.43
LINC00352-201ENST00000425800 CLEC11AQ9Y240 323 aa12.36□□□□□ -0.43
LINC00352-201ENST00000425800 EVX2Q03828 476 aa12.35□□□□□ -0.43
LINC00352-201ENST00000425800 SSUH2Q9Y2M2 353 aa12.35□□□□□ -0.43
LINC00352-201ENST00000425800 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
LINC00352-201ENST00000425800 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
LINC00352-201ENST00000425800 SMARCA2P51531 1590 aa12.32□□□□□ -0.44
LINC00352-201ENST00000425800 PRKAR2AP13861 404 aaKnown RBP12.31□□□□□ -0.44
LINC00352-201ENST00000425800 BAZ1BQ9UIG0 1483 aaKnown RBP12.28□□□□□ -0.44
LINC00352-201ENST00000425800 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
LINC00352-201ENST00000425800 DNAJC5Q9H3Z4 198 aa12.28□□□□□ -0.44
LINC00352-201ENST00000425800 SMARCA4P51532 1647 aa12.28□□□□□ -0.44
LINC00352-201ENST00000425800 HMGXB3Q12766 1538 aa12.22□□□□□ -0.45
LINC00352-201ENST00000425800 CUX2O14529 1486 aa12.22□□□□□ -0.45
LINC00352-201ENST00000425800 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
LINC00352-201ENST00000425800 NESP48681 1621 aa12.19□□□□□ -0.46
LINC00352-201ENST00000425800 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
LINC00352-201ENST00000425800 MROH2BQ7Z745 1585 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms