Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 uc_338.31-201ENST00000615595 186 ntBASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 AC114546.4-201ENST00000624413 369 ntBASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 SNORA16A-202ENST00000628458 135 ntBASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 AC034111.1-201ENST00000562143 3770 ntBASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 CASC19-255ENST00000641733 1385 ntBASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.43□□□□□ -1.38
CCDC187A0A096LP49 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 ENO1P4-201ENST00000416471 1785 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 YWHAZP4-201ENST00000392459 708 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AL359694.1-201ENST00000403247 604 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AJ239321.1-201ENST00000424255 564 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC099782.1-201ENST00000425889 474 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AL590762.3-201ENST00000436372 640 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AL034399.1-201ENST00000451535 380 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AP002884.1-201ENST00000479691 655 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 SSX8-201ENST00000506270 579 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 HSD3BP3-201ENST00000514706 994 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 RNA5SP441-201ENST00000516809 88 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC135983.3-201ENST00000528049 1226 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC002310.3-201ENST00000569728 723 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AL078601.3-201ENST00000573303 535 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 SYPL1P2-201ENST00000582878 727 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 DYNLL1P1-201ENST00000595442 269 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC111186.1-201ENST00000604684 130 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AL121583.1-201ENST00000612444 682 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AL359742.1-201ENST00000622497 540 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC116631.1-202ENST00000640984 683 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 SPATA31C1-201ENST00000420021 3895 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 IFIT1P1-201ENST00000400497 1449 ntBASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCDC187A0A096LP49 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 CASC19-243ENST00000641588 1546 ntBASIC6.41□□□□□ -1.38
CCDC187A0A096LP49 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms