RNA–Protein interactions for RNA: ENST00000369458.7

VTCN1-203, Transcript of V-set domain containing T cell activation inhibitor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VTCN1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTCN1-203ENST00000369458 CHIC1Q5VXU3 224 aa15□□□□□ -0.01
VTCN1-203ENST00000369458 AEBP2Q6ZN18 517 aaPredicted RBP14.96□□□□□ -0.01
VTCN1-203ENST00000369458 NISCHQ9Y2I1 1504 aa13.73□□□□□ -0.21
VTCN1-203ENST00000369458 PHF23Q9BUL5 403 aaPredicted RBP13.42□□□□□ -0.26
VTCN1-203ENST00000369458 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
VTCN1-203ENST00000369458 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
VTCN1-203ENST00000369458 SENP3Q9H4L4 574 aaPredicted RBP12.35□□□□□ -0.43
VTCN1-203ENST00000369458 CCDC180Q9P1Z9 1646 aa12.13□□□□□ -0.47
VTCN1-203ENST00000369458 MYT1Q01538 1121 aa12.13□□□□□ -0.47
VTCN1-203ENST00000369458 ADRA2BP18089 450 aa11.89□□□□□ -0.51
VTCN1-203ENST00000369458 PRKCSHP14314 528 aaPredicted RBP11.86□□□□□ -0.51
VTCN1-203ENST00000369458 PPP6R1Q9UPN7 881 aa11.72□□□□□ -0.53
VTCN1-203ENST00000369458 ZCCHC6Q5VYS8 1495 aaKnown RBP11.68□□□□□ -0.54
VTCN1-203ENST00000369458 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
VTCN1-203ENST00000369458 KCNA4P22459 653 aa11.64□□□□□ -0.55
VTCN1-203ENST00000369458 TTBK1Q5TCY1 1321 aaPredicted RBP11.63□□□□□ -0.55
VTCN1-203ENST00000369458 HRCP23327 699 aa11.62□□□□□ -0.55
VTCN1-203ENST00000369458 SCAF1Q9H7N4 1312 aaKnown RBP11.61□□□□□ -0.55
VTCN1-203ENST00000369458 FOXD1Q16676 465 aa11.57□□□□□ -0.56
VTCN1-203ENST00000369458 PPARGC1BQ86YN6 1023 aaKnown RBP11.56□□□□□ -0.56
VTCN1-203ENST00000369458 SHROOM4Q9ULL8 1493 aa11.55□□□□□ -0.56
VTCN1-203ENST00000369458 BCL11AQ9H165 835 aa11.54□□□□□ -0.56
VTCN1-203ENST00000369458 FAM9AQ8IZU1 332 aaPredicted RBP11.45□□□□□ -0.58
VTCN1-203ENST00000369458 SUPT5HO00267 1087 aaKnown RBP11.42□□□□□ -0.58
VTCN1-203ENST00000369458 MYO15BQ96JP2 1530 aa11.41□□□□□ -0.58
VTCN1-203ENST00000369458 DCAF1Q9Y4B6 1507 aa11.4□□□□□ -0.58
VTCN1-203ENST00000369458 APLP2Q06481 763 aa11.35□□□□□ -0.59
VTCN1-203ENST00000369458 ERICH6Q7L0X2 663 aa11.31□□□□□ -0.6
VTCN1-203ENST00000369458 SLC24A1O60721 1099 aa11.3□□□□□ -0.6
VTCN1-203ENST00000369458 NACADO15069 1562 aa11.28□□□□□ -0.6
VTCN1-203ENST00000369458 RB1CC1Q8TDY2 1594 aa11.21□□□□□ -0.62
VTCN1-203ENST00000369458 ABCC9O60706 1549 aa11.2□□□□□ -0.62
VTCN1-203ENST00000369458 CSRNP3Q8WYN3 585 aa11.14□□□□□ -0.63
VTCN1-203ENST00000369458 PCGF6Q9BYE7 350 aa11.1□□□□□ -0.63
VTCN1-203ENST00000369458 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.64
VTCN1-203ENST00000369458 SLC4A1APQ9BWU0 796 aaKnown RBP11.08□□□□□ -0.64
VTCN1-203ENST00000369458 PIAS4Q8N2W9 510 aaPredicted RBP11.05□□□□□ -0.64
VTCN1-203ENST00000369458 CENPBP07199 599 aaPredicted RBP11.03□□□□□ -0.64
VTCN1-203ENST00000369458 GTF3C3Q9Y5Q9 886 aa10.99□□□□□ -0.65
VTCN1-203ENST00000369458 TRIM26Q12899 539 aaPredicted RBP10.97□□□□□ -0.65
VTCN1-203ENST00000369458 NEUROD1Q13562 356 aa10.96□□□□□ -0.65
VTCN1-203ENST00000369458 ACIN1Q9UKV3 1341 aaKnown RBP10.94□□□□□ -0.66
VTCN1-203ENST00000369458 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
VTCN1-203ENST00000369458 UNC13AQ9UPW8 1703 aa10.92□□□□□ -0.66
VTCN1-203ENST00000369458 LOC105371045A0A1W2PR82 267 aa10.9□□□□□ -0.66
VTCN1-203ENST00000369458 ZEB1P37275 1124 aaPredicted RBP10.89□□□□□ -0.67
VTCN1-203ENST00000369458 RSF1Q96T23 1441 aaPredicted RBP10.89□□□□□ -0.67
VTCN1-203ENST00000369458 NPM3O75607 178 aaKnown RBP10.85□□□□□ -0.67
VTCN1-203ENST00000369458 ANP32EQ9BTT0 268 aa10.82□□□□□ -0.68
VTCN1-203ENST00000369458 PLEKHG5O94827 1062 aa10.8□□□□□ -0.68
VTCN1-203ENST00000369458 SCRIBQ14160 1630 aa10.8□□□□□ -0.68
VTCN1-203ENST00000369458 EIF5BO60841 1220 aaKnown RBP10.79□□□□□ -0.68
VTCN1-203ENST00000369458 NCBP3Q53F19 620 aaKnown RBP10.79□□□□□ -0.68
VTCN1-203ENST00000369458 ANO8Q9HCE9 1232 aaPredicted RBP10.79□□□□□ -0.68
VTCN1-203ENST00000369458 ZBTB22O15209 634 aa10.78□□□□□ -0.68
VTCN1-203ENST00000369458 BICRAQ9NZM4 1560 aa10.77□□□□□ -0.69
VTCN1-203ENST00000369458 DAXXQ9UER7 740 aaPredicted RBP10.75□□□□□ -0.69
VTCN1-203ENST00000369458 RTN4Q9NQC3 1192 aaKnown RBP10.71□□□□□ -0.69
VTCN1-203ENST00000369458 TRIM41Q8WV44 630 aa10.71□□□□□ -0.69
VTCN1-203ENST00000369458 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
VTCN1-203ENST00000369458 BAZ1AQ9NRL2 1556 aaPredicted RBP10.64□□□□□ -0.71
VTCN1-203ENST00000369458 MROH2BQ7Z745 1585 aa10.62□□□□□ -0.71
VTCN1-203ENST00000369458 WIZO95785 1651 aa10.59□□□□□ -0.71
VTCN1-203ENST00000369458 CECR2Q9BXF3 1484 aa10.59□□□□□ -0.71
VTCN1-203ENST00000369458 CCDC136Q96JN2 1154 aa10.59□□□□□ -0.71
VTCN1-203ENST00000369458 UBE2Q2Q8WVN8 375 aa10.56□□□□□ -0.72
VTCN1-203ENST00000369458 WRNQ14191 1432 aaPredicted RBP eCLIP10.55□□□□□ -0.72
VTCN1-203ENST00000369458 CNKSR2Q8WXI2 1034 aa10.54□□□□□ -0.72
VTCN1-203ENST00000369458 SALL2Q9Y467 1007 aaPredicted RBP10.52□□□□□ -0.73
VTCN1-203ENST00000369458 MAPK8IP2Q13387 824 aaPredicted RBP10.51□□□□□ -0.73
VTCN1-203ENST00000369458 TOP2AP11388 1531 aaKnown RBP10.49□□□□□ -0.73
VTCN1-203ENST00000369458 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
VTCN1-203ENST00000369458 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
VTCN1-203ENST00000369458 EEA1Q15075 1411 aa10.44□□□□□ -0.74
VTCN1-203ENST00000369458 SMARCA4P51532 1647 aa10.43□□□□□ -0.74
VTCN1-203ENST00000369458 SMARCA2P51531 1590 aa10.42□□□□□ -0.74
VTCN1-203ENST00000369458 PKNOX2Q96KN3 472 aa10.42□□□□□ -0.74
VTCN1-203ENST00000369458 TNIKQ9UKE5 1360 aa10.41□□□□□ -0.74
VTCN1-203ENST00000369458 YTHDC1Q96MU7 727 aaKnown RBP10.4□□□□□ -0.74
VTCN1-203ENST00000369458 TSHZ2Q9NRE2 1034 aa10.4□□□□□ -0.74
VTCN1-203ENST00000369458 CEP162Q5TB80 1403 aa10.39□□□□□ -0.75
VTCN1-203ENST00000369458 CCER1Q8TC90 406 aaPredicted RBP10.38□□□□□ -0.75
VTCN1-203ENST00000369458 CCDC88BA6NC98 1476 aa10.37□□□□□ -0.75
VTCN1-203ENST00000369458 FOXD4L1Q9NU39 408 aa10.37□□□□□ -0.75
VTCN1-203ENST00000369458 ABCC8Q09428 1581 aa10.37□□□□□ -0.75
VTCN1-203ENST00000369458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.36□□□□□ -0.75
VTCN1-203ENST00000369458 HMGXB3Q12766 1538 aa10.36□□□□□ -0.75
VTCN1-203ENST00000369458 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.36□□□□□ -0.75
VTCN1-203ENST00000369458 CC2D2AQ9P2K1 1620 aa10.35□□□□□ -0.75
VTCN1-203ENST00000369458 DIEXFQ68CQ4 756 aaKnown RBP10.34□□□□□ -0.75
VTCN1-203ENST00000369458 KIF21BO75037 1637 aa10.31□□□□□ -0.76
VTCN1-203ENST00000369458 GOLGA3Q08378 1498 aa10.31□□□□□ -0.76
VTCN1-203ENST00000369458 NCAPD3P42695 1498 aa10.29□□□□□ -0.76
VTCN1-203ENST00000369458 SOGA1O94964 1423 aa10.29□□□□□ -0.76
VTCN1-203ENST00000369458 AMER1Q5JTC6 1135 aaPredicted RBP10.29□□□□□ -0.76
VTCN1-203ENST00000369458 PABPN1Q86U42 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
VTCN1-203ENST00000369458 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
VTCN1-203ENST00000369458 CEP164Q9UPV0 1460 aa10.24□□□□□ -0.77
VTCN1-203ENST00000369458 BAZ1BQ9UIG0 1483 aaKnown RBP10.24□□□□□ -0.77
VTCN1-203ENST00000369458 RUSC2Q8N2Y8 1516 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms