RNA–Protein interactions for RNA: ENST00000541091.5

GRIA3-204, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene GRIA3, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-204ENST00000541091 NISCHQ9Y2I1 1504 aa15.3■□□□□ 0.04
GRIA3-204ENST00000541091 CHIC1Q5VXU3 224 aa14.36□□□□□ -0.11
GRIA3-204ENST00000541091 SLC24A1O60721 1099 aa13.94□□□□□ -0.18
GRIA3-204ENST00000541091 AEBP2Q6ZN18 517 aaPredicted RBP13.93□□□□□ -0.18
GRIA3-204ENST00000541091 EHMT2Q96KQ7 1210 aa13.81□□□□□ -0.2
GRIA3-204ENST00000541091 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
GRIA3-204ENST00000541091 PHF23Q9BUL5 403 aaPredicted RBP13.24□□□□□ -0.29
GRIA3-204ENST00000541091 CCDC180Q9P1Z9 1646 aa13.05□□□□□ -0.32
GRIA3-204ENST00000541091 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
GRIA3-204ENST00000541091 SHROOM4Q9ULL8 1493 aa13.04□□□□□ -0.32
GRIA3-204ENST00000541091 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
GRIA3-204ENST00000541091 DCAF8L2P0C7V8 631 aa12.88□□□□□ -0.35
GRIA3-204ENST00000541091 KCNA4P22459 653 aa12.74□□□□□ -0.37
GRIA3-204ENST00000541091 CSRNP3Q8WYN3 585 aa12.73□□□□□ -0.37
GRIA3-204ENST00000541091 ABCC9O60706 1549 aa12.71□□□□□ -0.37
GRIA3-204ENST00000541091 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.38
GRIA3-204ENST00000541091 PRKCSHP14314 528 aaPredicted RBP12.57□□□□□ -0.4
GRIA3-204ENST00000541091 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
GRIA3-204ENST00000541091 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
GRIA3-204ENST00000541091 SCRIBQ14160 1630 aa12.28□□□□□ -0.44
GRIA3-204ENST00000541091 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
GRIA3-204ENST00000541091 RB1CC1Q8TDY2 1594 aa12.25□□□□□ -0.45
GRIA3-204ENST00000541091 NACADO15069 1562 aa12.22□□□□□ -0.45
GRIA3-204ENST00000541091 MYO15BQ96JP2 1530 aa12.2□□□□□ -0.46
GRIA3-204ENST00000541091 DAXXQ9UER7 740 aaPredicted RBP12.17□□□□□ -0.46
GRIA3-204ENST00000541091 ADRA2BP18089 450 aa12.12□□□□□ -0.47
GRIA3-204ENST00000541091 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
GRIA3-204ENST00000541091 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
GRIA3-204ENST00000541091 TIMELESSQ9UNS1 1208 aa12.02□□□□□ -0.48
GRIA3-204ENST00000541091 CECR2Q9BXF3 1484 aa11.98□□□□□ -0.49
GRIA3-204ENST00000541091 UNC13AQ9UPW8 1703 aa11.98□□□□□ -0.49
GRIA3-204ENST00000541091 MROH2BQ7Z745 1585 aa11.91□□□□□ -0.5
GRIA3-204ENST00000541091 ZBTB22O15209 634 aa11.91□□□□□ -0.5
GRIA3-204ENST00000541091 PELP1Q8IZL8 1130 aaKnown RBP11.9□□□□□ -0.5
GRIA3-204ENST00000541091 LOC105371045A0A1W2PR82 267 aa11.88□□□□□ -0.51
GRIA3-204ENST00000541091 TULP1O00294 542 aaPredicted RBP11.84□□□□□ -0.51
GRIA3-204ENST00000541091 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
GRIA3-204ENST00000541091 WIZO95785 1651 aa11.84□□□□□ -0.51
GRIA3-204ENST00000541091 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
GRIA3-204ENST00000541091 MYT1Q01538 1121 aa11.83□□□□□ -0.52
GRIA3-204ENST00000541091 TRIM41Q8WV44 630 aa11.82□□□□□ -0.52
GRIA3-204ENST00000541091 TAOK2Q9UL54 1235 aa11.81□□□□□ -0.52
GRIA3-204ENST00000541091 BAZ1AQ9NRL2 1556 aaPredicted RBP11.77□□□□□ -0.53
GRIA3-204ENST00000541091 FAM9AQ8IZU1 332 aaPredicted RBP11.77□□□□□ -0.53
GRIA3-204ENST00000541091 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
GRIA3-204ENST00000541091 PCGF6Q9BYE7 350 aa11.71□□□□□ -0.54
GRIA3-204ENST00000541091 SMARCA4P51532 1647 aa11.69□□□□□ -0.54
GRIA3-204ENST00000541091 TOP2AP11388 1531 aaKnown RBP11.63□□□□□ -0.55
GRIA3-204ENST00000541091 DNAJC5BQ9UF47 199 aa11.62□□□□□ -0.55
GRIA3-204ENST00000541091 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
GRIA3-204ENST00000541091 SMARCA2P51531 1590 aa11.57□□□□□ -0.56
GRIA3-204ENST00000541091 EIF4G1Q04637 1599 aaKnown RBP11.56□□□□□ -0.56
GRIA3-204ENST00000541091 HRCP23327 699 aa11.54□□□□□ -0.56
GRIA3-204ENST00000541091 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
GRIA3-204ENST00000541091 HAP1P54257 671 aaPredicted RBP11.52□□□□□ -0.56
GRIA3-204ENST00000541091 CC2D2AQ9P2K1 1620 aa11.51□□□□□ -0.57
GRIA3-204ENST00000541091 PLCB2Q00722 1185 aa11.51□□□□□ -0.57
GRIA3-204ENST00000541091 ARXQ96QS3 562 aa11.51□□□□□ -0.57
GRIA3-204ENST00000541091 TTBK1Q5TCY1 1321 aaPredicted RBP11.49□□□□□ -0.57
GRIA3-204ENST00000541091 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
GRIA3-204ENST00000541091 BCANQ96GW7 911 aa11.47□□□□□ -0.57
GRIA3-204ENST00000541091 KLHL34Q8N239 644 aa11.46□□□□□ -0.57
GRIA3-204ENST00000541091 ATAD2BQ9ULI0 1458 aa11.45□□□□□ -0.58
GRIA3-204ENST00000541091 PPP6R1Q9UPN7 881 aa11.44□□□□□ -0.58
GRIA3-204ENST00000541091 PEG3Q9GZU2 1588 aa11.43□□□□□ -0.58
GRIA3-204ENST00000541091 NPM3O75607 178 aaKnown RBP11.43□□□□□ -0.58
GRIA3-204ENST00000541091 BAZ1BQ9UIG0 1483 aaKnown RBP11.42□□□□□ -0.58
GRIA3-204ENST00000541091 PPARGC1BQ86YN6 1023 aaKnown RBP11.41□□□□□ -0.58
GRIA3-204ENST00000541091 FKBP8Q14318 412 aa11.4□□□□□ -0.58
GRIA3-204ENST00000541091 SOGA1O94964 1423 aa11.4□□□□□ -0.59
GRIA3-204ENST00000541091 RUSC2Q8N2Y8 1516 aa11.35□□□□□ -0.59
GRIA3-204ENST00000541091 WRNQ14191 1432 aaPredicted RBP eCLIP11.35□□□□□ -0.59
GRIA3-204ENST00000541091 PODXL2Q9NZ53 605 aa11.34□□□□□ -0.59
GRIA3-204ENST00000541091 UBTFP17480 764 aaKnown RBP11.3□□□□□ -0.6
GRIA3-204ENST00000541091 GTF3C3Q9Y5Q9 886 aa11.3□□□□□ -0.6
GRIA3-204ENST00000541091 SYNJ1O43426 1573 aa11.29□□□□□ -0.6
GRIA3-204ENST00000541091 FBLN2P98095 1184 aa11.29□□□□□ -0.6
GRIA3-204ENST00000541091 KDM2AQ9Y2K7 1162 aa11.27□□□□□ -0.61
GRIA3-204ENST00000541091 HOMEZQ8IX15 550 aa11.26□□□□□ -0.61
GRIA3-204ENST00000541091 EEA1Q15075 1411 aa11.26□□□□□ -0.61
GRIA3-204ENST00000541091 CEP162Q5TB80 1403 aa11.26□□□□□ -0.61
GRIA3-204ENST00000541091 NCAPD3P42695 1498 aa11.24□□□□□ -0.61
GRIA3-204ENST00000541091 APLP2Q06481 763 aa11.24□□□□□ -0.61
GRIA3-204ENST00000541091 TNIKQ9UKE5 1360 aa11.23□□□□□ -0.61
GRIA3-204ENST00000541091 HMGXB3Q12766 1538 aa11.22□□□□□ -0.61
GRIA3-204ENST00000541091 GOLGA3Q08378 1498 aa11.21□□□□□ -0.62
GRIA3-204ENST00000541091 RANGAP1P46060 587 aaPredicted RBP11.18□□□□□ -0.62
GRIA3-204ENST00000541091 CEP164Q9UPV0 1460 aa11.15□□□□□ -0.62
GRIA3-204ENST00000541091 TOP2BQ02880 1626 aa11.14□□□□□ -0.63
GRIA3-204ENST00000541091 ZEB1P37275 1124 aaPredicted RBP11.13□□□□□ -0.63
GRIA3-204ENST00000541091 RAPGEF2Q9Y4G8 1499 aa11.12□□□□□ -0.63
GRIA3-204ENST00000541091 KIF21BO75037 1637 aa11.11□□□□□ -0.63
GRIA3-204ENST00000541091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.11□□□□□ -0.63
GRIA3-204ENST00000541091 CFTRP13569 1480 aa11.1□□□□□ -0.63
GRIA3-204ENST00000541091 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
GRIA3-204ENST00000541091 CUX1P39880 1505 aa11.09□□□□□ -0.63
GRIA3-204ENST00000541091 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
GRIA3-204ENST00000541091 CLIP1P30622 1438 aa11.09□□□□□ -0.63
GRIA3-204ENST00000541091 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.64
GRIA3-204ENST00000541091 CCER1Q8TC90 406 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms