RNA–Protein interactions for RNA: ENST00000541972.5

CD163-209, Transcript of CD163 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD163, Length 3,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD163-209ENST00000541972 NISCHQ9Y2I1 1504 aa15.69■□□□□ 0.1
CD163-209ENST00000541972 CCDC180Q9P1Z9 1646 aa13.79□□□□□ -0.2
CD163-209ENST00000541972 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
CD163-209ENST00000541972 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
CD163-209ENST00000541972 DCAF1Q9Y4B6 1507 aa13.19□□□□□ -0.3
CD163-209ENST00000541972 MYO15BQ96JP2 1530 aa13.03□□□□□ -0.32
CD163-209ENST00000541972 SUPT5HO00267 1087 aaKnown RBP13□□□□□ -0.33
CD163-209ENST00000541972 DCAF8L2P0C7V8 631 aa12.83□□□□□ -0.36
CD163-209ENST00000541972 CHIC1Q5VXU3 224 aa12.69□□□□□ -0.38
CD163-209ENST00000541972 SCRIBQ14160 1630 aa12.59□□□□□ -0.39
CD163-209ENST00000541972 ABCC9O60706 1549 aa12.57□□□□□ -0.4
CD163-209ENST00000541972 NACADO15069 1562 aa12.54□□□□□ -0.4
CD163-209ENST00000541972 RB1CC1Q8TDY2 1594 aa12.43□□□□□ -0.42
CD163-209ENST00000541972 RSF1Q96T23 1441 aaPredicted RBP12.43□□□□□ -0.42
CD163-209ENST00000541972 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
CD163-209ENST00000541972 CECR2Q9BXF3 1484 aa12.37□□□□□ -0.43
CD163-209ENST00000541972 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
CD163-209ENST00000541972 WIZO95785 1651 aa12.29□□□□□ -0.44
CD163-209ENST00000541972 UNC13AQ9UPW8 1703 aa12.27□□□□□ -0.44
CD163-209ENST00000541972 PCGF6Q9BYE7 350 aa12.22□□□□□ -0.45
CD163-209ENST00000541972 HRCP23327 699 aa12.2□□□□□ -0.46
CD163-209ENST00000541972 PPARGC1BQ86YN6 1023 aaKnown RBP12.19□□□□□ -0.46
CD163-209ENST00000541972 EIF4G1Q04637 1599 aaKnown RBP12.19□□□□□ -0.46
CD163-209ENST00000541972 PELP1Q8IZL8 1130 aaKnown RBP12.08□□□□□ -0.48
CD163-209ENST00000541972 BAZ1AQ9NRL2 1556 aaPredicted RBP12.08□□□□□ -0.48
CD163-209ENST00000541972 FAM9AQ8IZU1 332 aaPredicted RBP12.04□□□□□ -0.48
CD163-209ENST00000541972 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
CD163-209ENST00000541972 PEG3Q9GZU2 1588 aa12.02□□□□□ -0.48
CD163-209ENST00000541972 SMARCA4P51532 1647 aa12□□□□□ -0.49
CD163-209ENST00000541972 ABCC8Q09428 1581 aa12□□□□□ -0.49
CD163-209ENST00000541972 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
CD163-209ENST00000541972 BICRAQ9NZM4 1560 aa11.99□□□□□ -0.49
CD163-209ENST00000541972 SMARCA2P51531 1590 aa11.96□□□□□ -0.5
CD163-209ENST00000541972 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
CD163-209ENST00000541972 TOP2AP11388 1531 aaKnown RBP11.92□□□□□ -0.5
CD163-209ENST00000541972 TRIM26Q12899 539 aaPredicted RBP11.87□□□□□ -0.51
CD163-209ENST00000541972 RUSC2Q8N2Y8 1516 aa11.86□□□□□ -0.51
CD163-209ENST00000541972 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
CD163-209ENST00000541972 SOGA1O94964 1423 aa11.81□□□□□ -0.52
CD163-209ENST00000541972 SYNJ1O43426 1573 aa11.73□□□□□ -0.53
CD163-209ENST00000541972 SCAF1Q9H7N4 1312 aaKnown RBP11.69□□□□□ -0.54
CD163-209ENST00000541972 MYT1Q01538 1121 aa11.66□□□□□ -0.54
CD163-209ENST00000541972 PRDM2Q13029 1718 aa11.65□□□□□ -0.54
CD163-209ENST00000541972 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
CD163-209ENST00000541972 HMGXB3Q12766 1538 aa11.63□□□□□ -0.55
CD163-209ENST00000541972 CEP162Q5TB80 1403 aa11.62□□□□□ -0.55
CD163-209ENST00000541972 TTBK1Q5TCY1 1321 aaPredicted RBP11.6□□□□□ -0.55
CD163-209ENST00000541972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.57□□□□□ -0.56
CD163-209ENST00000541972 WRNQ14191 1432 aaPredicted RBP eCLIP11.57□□□□□ -0.56
CD163-209ENST00000541972 TNIKQ9UKE5 1360 aa11.53□□□□□ -0.56
CD163-209ENST00000541972 BAZ1BQ9UIG0 1483 aaKnown RBP11.52□□□□□ -0.57
CD163-209ENST00000541972 RAPGEF2Q9Y4G8 1499 aa11.5□□□□□ -0.57
CD163-209ENST00000541972 CSRNP3Q8WYN3 585 aa11.5□□□□□ -0.57
CD163-209ENST00000541972 KIF21BO75037 1637 aa11.5□□□□□ -0.57
CD163-209ENST00000541972 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
CD163-209ENST00000541972 BIVM-ERCC5R4GMW8 1640 aa11.48□□□□□ -0.57
CD163-209ENST00000541972 GOLGA3Q08378 1498 aa11.46□□□□□ -0.58
CD163-209ENST00000541972 NCAPD3P42695 1498 aa11.45□□□□□ -0.58
CD163-209ENST00000541972 CUX1P39880 1505 aa11.44□□□□□ -0.58
CD163-209ENST00000541972 EEA1Q15075 1411 aa11.41□□□□□ -0.58
CD163-209ENST00000541972 ZEB1P37275 1124 aaPredicted RBP11.39□□□□□ -0.59
CD163-209ENST00000541972 UBTFP17480 764 aaKnown RBP11.39□□□□□ -0.59
CD163-209ENST00000541972 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
CD163-209ENST00000541972 CLIP1P30622 1438 aa11.38□□□□□ -0.59
CD163-209ENST00000541972 ARAP1Q96P48 1450 aa11.34□□□□□ -0.59
CD163-209ENST00000541972 ACIN1Q9UKV3 1341 aaKnown RBP11.34□□□□□ -0.59
CD163-209ENST00000541972 RANGAP1P46060 587 aaPredicted RBP11.33□□□□□ -0.6
CD163-209ENST00000541972 PRXQ9BXM0 1461 aa11.33□□□□□ -0.6
CD163-209ENST00000541972 CCER1Q8TC90 406 aaPredicted RBP11.32□□□□□ -0.6
CD163-209ENST00000541972 NEUROD1Q13562 356 aa11.32□□□□□ -0.6
CD163-209ENST00000541972 GTF3C3Q9Y5Q9 886 aa11.31□□□□□ -0.6
CD163-209ENST00000541972 VPS8Q8N3P4 1428 aa11.31□□□□□ -0.6
CD163-209ENST00000541972 CFTRP13569 1480 aa11.29□□□□□ -0.6
CD163-209ENST00000541972 KANK4Q5T7N3 995 aaPredicted RBP11.26□□□□□ -0.61
CD163-209ENST00000541972 ERICH3Q5RHP9 1530 aa11.25□□□□□ -0.61
CD163-209ENST00000541972 HNRNPUL2Q1KMD3 747 aaKnown RBP11.24□□□□□ -0.61
CD163-209ENST00000541972 CC2D2AQ9P2K1 1620 aa11.22□□□□□ -0.61
CD163-209ENST00000541972 ARHGAP35Q9NRY4 1499 aa11.22□□□□□ -0.61
CD163-209ENST00000541972 CENPBP07199 599 aaPredicted RBP11.2□□□□□ -0.62
CD163-209ENST00000541972 DNAJC5BQ9UF47 199 aa11.17□□□□□ -0.62
CD163-209ENST00000541972 NESP48681 1621 aa11.16□□□□□ -0.62
CD163-209ENST00000541972 FGD5Q6ZNL6 1462 aa11.15□□□□□ -0.62
CD163-209ENST00000541972 DIEXFQ68CQ4 756 aaKnown RBP11.15□□□□□ -0.62
CD163-209ENST00000541972 WDR97A6NE52 1622 aa11.15□□□□□ -0.63
CD163-209ENST00000541972 IGF1RP08069 1367 aa11.14□□□□□ -0.63
CD163-209ENST00000541972 LRRIQ1Q96JM4 1722 aa11.13□□□□□ -0.63
CD163-209ENST00000541972 CUX2O14529 1486 aa11.12□□□□□ -0.63
CD163-209ENST00000541972 KIF27Q86VH2 1401 aa11.11□□□□□ -0.63
CD163-209ENST00000541972 RAD54L2Q9Y4B4 1467 aa11.11□□□□□ -0.63
CD163-209ENST00000541972 LAMC3Q9Y6N6 1575 aa11.11□□□□□ -0.63
CD163-209ENST00000541972 DHX57Q6P158 1386 aaKnown RBP11.11□□□□□ -0.63
CD163-209ENST00000541972 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
CD163-209ENST00000541972 RRBP1Q9P2E9 1410 aaKnown RBP11.09□□□□□ -0.63
CD163-209ENST00000541972 PCF11O94913 1555 aaKnown RBP11.07□□□□□ -0.64
CD163-209ENST00000541972 MIER1Q8N108 512 aa11.06□□□□□ -0.64
CD163-209ENST00000541972 TIAM1Q13009 1591 aa11.05□□□□□ -0.64
CD163-209ENST00000541972 ZNF316A6NFI3 1004 aaPredicted RBP11.05□□□□□ -0.64
CD163-209ENST00000541972 MAPKBP1O60336 1514 aa11.05□□□□□ -0.64
CD163-209ENST00000541972 FANCD2Q9BXW9 1451 aa11.05□□□□□ -0.64
CD163-209ENST00000541972 CFAP43Q8NDM7 1665 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms