RNA–Protein interactions for RNA: ENST00000616657.1

CNTNAP3P1-201, Transcript of contactin associated protein-like 3 pseudogene 1, humanhuman

BASIC

Gene CNTNAP3P1, Length 906 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3P1-201ENST00000616657 AEBP2Q6ZN18 517 aaPredicted RBP20.76■□□□□ 0.91
CNTNAP3P1-201ENST00000616657 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
CNTNAP3P1-201ENST00000616657 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
CNTNAP3P1-201ENST00000616657 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
CNTNAP3P1-201ENST00000616657 FOXD1Q16676 465 aa16.47■□□□□ 0.23
CNTNAP3P1-201ENST00000616657 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
CNTNAP3P1-201ENST00000616657 NISCHQ9Y2I1 1504 aa16.05■□□□□ 0.16
CNTNAP3P1-201ENST00000616657 PLPPR3Q6T4P5 718 aa15.82■□□□□ 0.12
CNTNAP3P1-201ENST00000616657 MSH5O43196 834 aa15.49■□□□□ 0.07
CNTNAP3P1-201ENST00000616657 PPP6R1Q9UPN7 881 aa15.48■□□□□ 0.07
CNTNAP3P1-201ENST00000616657 ADRA2BP18089 450 aa15.44■□□□□ 0.06
CNTNAP3P1-201ENST00000616657 PIAS4Q8N2W9 510 aaPredicted RBP15.4■□□□□ 0.06
CNTNAP3P1-201ENST00000616657 ABCC9O60706 1549 aa14.62□□□□□ -0.07
CNTNAP3P1-201ENST00000616657 CCDC180Q9P1Z9 1646 aa14.6□□□□□ -0.07
CNTNAP3P1-201ENST00000616657 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
CNTNAP3P1-201ENST00000616657 SCAF1Q9H7N4 1312 aaKnown RBP14.06□□□□□ -0.16
CNTNAP3P1-201ENST00000616657 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.17
CNTNAP3P1-201ENST00000616657 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
CNTNAP3P1-201ENST00000616657 RB1CC1Q8TDY2 1594 aa13.89□□□□□ -0.19
CNTNAP3P1-201ENST00000616657 NACADO15069 1562 aa13.73□□□□□ -0.21
CNTNAP3P1-201ENST00000616657 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
CNTNAP3P1-201ENST00000616657 CACNB1Q02641 598 aaPredicted RBP13.67□□□□□ -0.22
CNTNAP3P1-201ENST00000616657 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
CNTNAP3P1-201ENST00000616657 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
CNTNAP3P1-201ENST00000616657 DCAF8L2P0C7V8 631 aa13.54□□□□□ -0.24
CNTNAP3P1-201ENST00000616657 KCNA4P22459 653 aa13.53□□□□□ -0.24
CNTNAP3P1-201ENST00000616657 HOXD11P31277 338 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP3P1-201ENST00000616657 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
CNTNAP3P1-201ENST00000616657 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
CNTNAP3P1-201ENST00000616657 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
CNTNAP3P1-201ENST00000616657 DCAF8L1A6NGE4 600 aa13.46□□□□□ -0.25
CNTNAP3P1-201ENST00000616657 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
CNTNAP3P1-201ENST00000616657 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
CNTNAP3P1-201ENST00000616657 ZCCHC6Q5VYS8 1495 aaKnown RBP13.33□□□□□ -0.28
CNTNAP3P1-201ENST00000616657 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
CNTNAP3P1-201ENST00000616657 SHROOM4Q9ULL8 1493 aa13.26□□□□□ -0.29
CNTNAP3P1-201ENST00000616657 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
CNTNAP3P1-201ENST00000616657 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
CNTNAP3P1-201ENST00000616657 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
CNTNAP3P1-201ENST00000616657 EIF4G1Q04637 1599 aaKnown RBP13.17□□□□□ -0.3
CNTNAP3P1-201ENST00000616657 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
CNTNAP3P1-201ENST00000616657 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
CNTNAP3P1-201ENST00000616657 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
CNTNAP3P1-201ENST00000616657 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
CNTNAP3P1-201ENST00000616657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.9□□□□□ -0.34
CNTNAP3P1-201ENST00000616657 EHMT2Q96KQ7 1210 aa12.85□□□□□ -0.35
CNTNAP3P1-201ENST00000616657 ERCC6Q03468 1493 aa12.67□□□□□ -0.38
CNTNAP3P1-201ENST00000616657 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
CNTNAP3P1-201ENST00000616657 SMARCA4P51532 1647 aa12.64□□□□□ -0.39
CNTNAP3P1-201ENST00000616657 CUX2O14529 1486 aa12.64□□□□□ -0.39
CNTNAP3P1-201ENST00000616657 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
CNTNAP3P1-201ENST00000616657 HMGXB3Q12766 1538 aa12.61□□□□□ -0.39
CNTNAP3P1-201ENST00000616657 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
CNTNAP3P1-201ENST00000616657 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
CNTNAP3P1-201ENST00000616657 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
CNTNAP3P1-201ENST00000616657 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
CNTNAP3P1-201ENST00000616657 POTEHQ6S545 545 aa12.58□□□□□ -0.4
CNTNAP3P1-201ENST00000616657 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.4
CNTNAP3P1-201ENST00000616657 NESP48681 1621 aa12.52□□□□□ -0.4
CNTNAP3P1-201ENST00000616657 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
CNTNAP3P1-201ENST00000616657 BAZ1BQ9UIG0 1483 aaKnown RBP12.52□□□□□ -0.41
CNTNAP3P1-201ENST00000616657 BAZ1AQ9NRL2 1556 aaPredicted RBP12.52□□□□□ -0.41
CNTNAP3P1-201ENST00000616657 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
CNTNAP3P1-201ENST00000616657 KIF21AQ7Z4S6 1674 aa12.5□□□□□ -0.41
CNTNAP3P1-201ENST00000616657 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
CNTNAP3P1-201ENST00000616657 PEG3Q9GZU2 1588 aa12.46□□□□□ -0.42
CNTNAP3P1-201ENST00000616657 LAMC3Q9Y6N6 1575 aa12.44□□□□□ -0.42
CNTNAP3P1-201ENST00000616657 ZBTB22O15209 634 aa12.41□□□□□ -0.42
CNTNAP3P1-201ENST00000616657 CAPN15O75808 1086 aa12.41□□□□□ -0.42
CNTNAP3P1-201ENST00000616657 MROH2BQ7Z745 1585 aa12.39□□□□□ -0.43
CNTNAP3P1-201ENST00000616657 DSG3P32926 999 aa12.32□□□□□ -0.44
CNTNAP3P1-201ENST00000616657 WIZO95785 1651 aa12.31□□□□□ -0.44
CNTNAP3P1-201ENST00000616657 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
CNTNAP3P1-201ENST00000616657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.27□□□□□ -0.45
CNTNAP3P1-201ENST00000616657 HNRNPUL2Q1KMD3 747 aaKnown RBP12.27□□□□□ -0.45
CNTNAP3P1-201ENST00000616657 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
CNTNAP3P1-201ENST00000616657 WDR62O43379 1518 aa12.26□□□□□ -0.45
CNTNAP3P1-201ENST00000616657 APLP2Q06481 763 aa12.25□□□□□ -0.45
CNTNAP3P1-201ENST00000616657 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
CNTNAP3P1-201ENST00000616657 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
CNTNAP3P1-201ENST00000616657 SAMD1Q6SPF0 538 aaPredicted RBP12.23□□□□□ -0.45
CNTNAP3P1-201ENST00000616657 PRDM2Q13029 1718 aa12.21□□□□□ -0.45
CNTNAP3P1-201ENST00000616657 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.46
CNTNAP3P1-201ENST00000616657 CADPSQ9ULU8 1353 aa12.19□□□□□ -0.46
CNTNAP3P1-201ENST00000616657 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
CNTNAP3P1-201ENST00000616657 ABCB7O75027 752 aa12.16□□□□□ -0.46
CNTNAP3P1-201ENST00000616657 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
CNTNAP3P1-201ENST00000616657 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
CNTNAP3P1-201ENST00000616657 ATXN8OSP0DMR3 200 aa12.13□□□□□ -0.47
CNTNAP3P1-201ENST00000616657 TOP2AP11388 1531 aaKnown RBP12.12□□□□□ -0.47
CNTNAP3P1-201ENST00000616657 CFTRP13569 1480 aa12.07□□□□□ -0.48
CNTNAP3P1-201ENST00000616657 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
CNTNAP3P1-201ENST00000616657 RSF1Q96T23 1441 aaPredicted RBP12.03□□□□□ -0.48
CNTNAP3P1-201ENST00000616657 RIMBP3CA6NJZ7 1639 aa11.97□□□□□ -0.49
CNTNAP3P1-201ENST00000616657 RIMBP3BA6NNM3 1639 aa11.97□□□□□ -0.49
CNTNAP3P1-201ENST00000616657 RIMBP3Q9UFD9 1639 aa11.97□□□□□ -0.49
CNTNAP3P1-201ENST00000616657 EIF4G3O43432 1585 aaKnown RBP11.96□□□□□ -0.49
CNTNAP3P1-201ENST00000616657 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.49
CNTNAP3P1-201ENST00000616657 CHD1O14646 1710 aa11.95□□□□□ -0.5
CNTNAP3P1-201ENST00000616657 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms