RNA–Protein interactions for RNA: ENST00000497208.5

SCG5-207, Transcript of secretogranin V, humanhuman

TSL 5 BASIC

Gene SCG5, Length 949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-207ENST00000497208 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
SCG5-207ENST00000497208 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
SCG5-207ENST00000497208 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
SCG5-207ENST00000497208 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
SCG5-207ENST00000497208 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
SCG5-207ENST00000497208 NISCHQ9Y2I1 1504 aa15.85■□□□□ 0.13
SCG5-207ENST00000497208 FOXD1Q16676 465 aa15.41■□□□□ 0.06
SCG5-207ENST00000497208 MSH5O43196 834 aa14.78□□□□□ -0.04
SCG5-207ENST00000497208 PIAS4Q8N2W9 510 aaPredicted RBP14.17□□□□□ -0.14
SCG5-207ENST00000497208 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
SCG5-207ENST00000497208 ABCC9O60706 1549 aa14□□□□□ -0.17
SCG5-207ENST00000497208 PPP6R1Q9UPN7 881 aa13.75□□□□□ -0.21
SCG5-207ENST00000497208 ADRA2BP18089 450 aa13.64□□□□□ -0.23
SCG5-207ENST00000497208 PLPPR3Q6T4P5 718 aa13.44□□□□□ -0.26
SCG5-207ENST00000497208 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
SCG5-207ENST00000497208 NACADO15069 1562 aa13.32□□□□□ -0.28
SCG5-207ENST00000497208 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
SCG5-207ENST00000497208 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
SCG5-207ENST00000497208 ZCCHC6Q5VYS8 1495 aaKnown RBP13.24□□□□□ -0.29
SCG5-207ENST00000497208 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
SCG5-207ENST00000497208 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
SCG5-207ENST00000497208 UNC13AQ9UPW8 1703 aa13.18□□□□□ -0.3
SCG5-207ENST00000497208 BICRAQ9NZM4 1560 aa13.09□□□□□ -0.31
SCG5-207ENST00000497208 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.32
SCG5-207ENST00000497208 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
SCG5-207ENST00000497208 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
SCG5-207ENST00000497208 SHROOM4Q9ULL8 1493 aa12.86□□□□□ -0.35
SCG5-207ENST00000497208 SCRIBQ14160 1630 aa12.85□□□□□ -0.35
SCG5-207ENST00000497208 MAPK8IP2Q13387 824 aaPredicted RBP12.79□□□□□ -0.36
SCG5-207ENST00000497208 CC2D2AQ9P2K1 1620 aa12.72□□□□□ -0.37
SCG5-207ENST00000497208 EIF4G1Q04637 1599 aaKnown RBP12.69□□□□□ -0.38
SCG5-207ENST00000497208 CECR2Q9BXF3 1484 aa12.63□□□□□ -0.39
SCG5-207ENST00000497208 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
SCG5-207ENST00000497208 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
SCG5-207ENST00000497208 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
SCG5-207ENST00000497208 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
SCG5-207ENST00000497208 C1QBPQ07021 282 aaKnown RBP12.31□□□□□ -0.44
SCG5-207ENST00000497208 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.44
SCG5-207ENST00000497208 BAZ1AQ9NRL2 1556 aaPredicted RBP12.27□□□□□ -0.44
SCG5-207ENST00000497208 SMARCA4P51532 1647 aa12.27□□□□□ -0.44
SCG5-207ENST00000497208 POTEHQ6S545 545 aa12.27□□□□□ -0.45
SCG5-207ENST00000497208 MROH2BQ7Z745 1585 aa12.25□□□□□ -0.45
SCG5-207ENST00000497208 HMGXB3Q12766 1538 aa12.21□□□□□ -0.45
SCG5-207ENST00000497208 PEG3Q9GZU2 1588 aa12.21□□□□□ -0.46
SCG5-207ENST00000497208 DNAJC5Q9H3Z4 198 aa12.2□□□□□ -0.46
SCG5-207ENST00000497208 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
SCG5-207ENST00000497208 RSF1Q96T23 1441 aaPredicted RBP12.16□□□□□ -0.46
SCG5-207ENST00000497208 WIZO95785 1651 aa12.16□□□□□ -0.46
SCG5-207ENST00000497208 CUX2O14529 1486 aa12.1□□□□□ -0.47
SCG5-207ENST00000497208 SUPT5HO00267 1087 aaKnown RBP12.1□□□□□ -0.47
SCG5-207ENST00000497208 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
SCG5-207ENST00000497208 NESP48681 1621 aa12.09□□□□□ -0.47
SCG5-207ENST00000497208 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.48
SCG5-207ENST00000497208 ERCC6Q03468 1493 aa12.02□□□□□ -0.49
SCG5-207ENST00000497208 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
SCG5-207ENST00000497208 TOP2AP11388 1531 aaKnown RBP11.99□□□□□ -0.49
SCG5-207ENST00000497208 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
SCG5-207ENST00000497208 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
SCG5-207ENST00000497208 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
SCG5-207ENST00000497208 PDS5BQ9NTI5 1447 aa11.89□□□□□ -0.51
SCG5-207ENST00000497208 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
SCG5-207ENST00000497208 CFTRP13569 1480 aa11.82□□□□□ -0.52
SCG5-207ENST00000497208 WDR62O43379 1518 aa11.81□□□□□ -0.52
SCG5-207ENST00000497208 MRC2Q9UBG0 1479 aa11.8□□□□□ -0.52
SCG5-207ENST00000497208 RNF216Q9NWF9 866 aaPredicted RBP11.78□□□□□ -0.52
SCG5-207ENST00000497208 FANCD2Q9BXW9 1451 aa11.76□□□□□ -0.53
SCG5-207ENST00000497208 CEP164Q9UPV0 1460 aa11.73□□□□□ -0.53
SCG5-207ENST00000497208 PRDM2Q13029 1718 aa11.71□□□□□ -0.54
SCG5-207ENST00000497208 URB2Q14146 1524 aaKnown RBP11.7□□□□□ -0.54
SCG5-207ENST00000497208 PPP4R3CPQ6ZMV5 832 aa11.66□□□□□ -0.54
SCG5-207ENST00000497208 CNKSR2Q8WXI2 1034 aa11.66□□□□□ -0.54
SCG5-207ENST00000497208 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
SCG5-207ENST00000497208 TOPBP1Q92547 1522 aa11.55□□□□□ -0.56
SCG5-207ENST00000497208 ZNF608Q9ULD9 1512 aaPredicted RBP11.54□□□□□ -0.56
SCG5-207ENST00000497208 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
SCG5-207ENST00000497208 IFT140Q96RY7 1462 aa11.52□□□□□ -0.56
SCG5-207ENST00000497208 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
SCG5-207ENST00000497208 TARBP1Q13395 1621 aaKnown RBP11.51□□□□□ -0.57
SCG5-207ENST00000497208 DNMBPQ6XZF7 1577 aa11.5□□□□□ -0.57
SCG5-207ENST00000497208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.5□□□□□ -0.57
SCG5-207ENST00000497208 CUX1P39880 1505 aa11.47□□□□□ -0.57
SCG5-207ENST00000497208 WRNQ14191 1432 aaPredicted RBP eCLIP11.46□□□□□ -0.57
SCG5-207ENST00000497208 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
SCG5-207ENST00000497208 EIF4G3O43432 1585 aaKnown RBP11.45□□□□□ -0.58
SCG5-207ENST00000497208 POLA1P09884 1462 aaPredicted RBP11.44□□□□□ -0.58
SCG5-207ENST00000497208 DSG3P32926 999 aa11.43□□□□□ -0.58
SCG5-207ENST00000497208 BIVM-ERCC5R4GMW8 1640 aa11.42□□□□□ -0.58
SCG5-207ENST00000497208 AQRO60306 1485 aaKnown RBP eCLIP11.42□□□□□ -0.58
SCG5-207ENST00000497208 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
SCG5-207ENST00000497208 RIMBP3CA6NJZ7 1639 aa11.41□□□□□ -0.58
SCG5-207ENST00000497208 RIMBP3BA6NNM3 1639 aa11.41□□□□□ -0.58
SCG5-207ENST00000497208 RIMBP3Q9UFD9 1639 aa11.41□□□□□ -0.58
SCG5-207ENST00000497208 FGD5Q6ZNL6 1462 aa11.4□□□□□ -0.58
SCG5-207ENST00000497208 RAD54L2Q9Y4B4 1467 aa11.38□□□□□ -0.59
SCG5-207ENST00000497208 CHD1O14646 1710 aa11.38□□□□□ -0.59
SCG5-207ENST00000497208 ARHGEF11O15085 1522 aa11.36□□□□□ -0.59
SCG5-207ENST00000497208 WDR97A6NE52 1622 aa11.36□□□□□ -0.59
SCG5-207ENST00000497208 SOGA1O94964 1423 aa11.35□□□□□ -0.59
SCG5-207ENST00000497208 TDRD9Q8NDG6 1382 aaKnown RBP11.33□□□□□ -0.6
SCG5-207ENST00000497208 CLASP1Q7Z460 1538 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms