Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.083e-7■□□□□ 9.2
PRPF8Q6P2Q9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.46□□□□□ -0.12e-12■□□□□ 9.2
PRPF8Q6P2Q9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.113e-7■□□□□ 9.2
PRPF8Q6P2Q9 HSPG2-208ENST00000471322 1602 ntTSL 514.21□□□□□ -0.143e-7■□□□□ 9.2
PRPF8Q6P2Q9 COL7A1-202ENST00000422991 597 ntTSL 514.15□□□□□ -0.143e-7■□□□□ 9.2
PRPF8Q6P2Q9 PI4KAP2-205ENST00000467443 1869 ntTSL 214.04□□□□□ -0.163e-7■□□□□ 9.2
PRPF8Q6P2Q9 COL7A1-204ENST00000462475 305 ntTSL 313.97□□□□□ -0.173e-7■□□□□ 9.2
PRPF8Q6P2Q9 LRRC20-202ENST00000357631 2906 ntTSL 213.63□□□□□ -0.232e-12■□□□□ 9.2
PRPF8Q6P2Q9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.63□□□□□ -0.232e-12■□□□□ 9.2
PRPF8Q6P2Q9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.233e-7■□□□□ 9.2
PRPF8Q6P2Q9 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.243e-7■□□□□ 9.2
PRPF8Q6P2Q9 ABHD14B-207ENST00000487005 1998 ntTSL 213.47□□□□□ -0.253e-7■□□□□ 9.2
PRPF8Q6P2Q9 XPO6-211ENST00000567038 559 ntTSL 213.35□□□□□ -0.273e-7■□□□□ 9.2
PRPF8Q6P2Q9 LRRC20-207ENST00000446961 663 ntTSL 213.31□□□□□ -0.282e-12■□□□□ 9.2
PRPF8Q6P2Q9 TACC3-208ENST00000484264 551 ntTSL 213.25□□□□□ -0.293e-7■□□□□ 9.2
PRPF8Q6P2Q9 EVI5-202ENST00000466778 321 ntTSL 313.12□□□□□ -0.313e-7■□□□□ 9.2
PRPF8Q6P2Q9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.323e-7■□□□□ 9.2
PRPF8Q6P2Q9 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.79□□□□□ -0.362e-12■□□□□ 9.2
PRPF8Q6P2Q9 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.75□□□□□ -0.373e-7■□□□□ 9.2
PRPF8Q6P2Q9 COL7A1-210ENST00000487017 5807 ntTSL 512.6□□□□□ -0.393e-7■□□□□ 9.2
PRPF8Q6P2Q9 XPO6-215ENST00000569315 703 ntTSL 212.26□□□□□ -0.453e-7■□□□□ 9.2
PRPF8Q6P2Q9 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.522e-12■□□□□ 9.2
PRPF8Q6P2Q9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.7□□□□□ -0.543e-7■□□□□ 9.2
PRPF8Q6P2Q9 PI4KAP2-213ENST00000494740 2273 ntTSL 511.4□□□□□ -0.583e-7■□□□□ 9.2
PRPF8Q6P2Q9 MORN1-206ENST00000469374 1907 ntTSL 511.39□□□□□ -0.593e-7■□□□□ 9.2
PRPF8Q6P2Q9 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.632e-12■□□□□ 9.2
PRPF8Q6P2Q9 PI4KAP2-203ENST00000462560 2553 ntTSL 1 (best)10.97□□□□□ -0.653e-7■□□□□ 9.2
PRPF8Q6P2Q9 MORN1-205ENST00000449373 4764 ntTSL 210.95□□□□□ -0.663e-7■□□□□ 9.2
PRPF8Q6P2Q9 PI4KAP2-201ENST00000360806 2080 ntBASIC10.91□□□□□ -0.663e-7■□□□□ 9.2
PRPF8Q6P2Q9 ABHD14B-205ENST00000473912 477 ntTSL 210.86□□□□□ -0.673e-7■□□□□ 9.2
PRPF8Q6P2Q9 HSPG2-202ENST00000374676 411 ntTSL 39.59□□□□□ -0.873e-7■□□□□ 9.2
PRPF8Q6P2Q9 MORN1-210ENST00000607031 3138 nt8.25□□□□□ -1.093e-7■□□□□ 9.2
PRPF8Q6P2Q9 PI4KAP2-210ENST00000480319 3872 ntTSL 27.77□□□□□ -1.173e-7■□□□□ 9.2
PRPF8Q6P2Q9 ATXN2-208ENST00000481331 381 ntTSL 36.47□□□□□ -1.373e-7■□□□□ 9.2
PRPF8Q6P2Q9 FLNB-213ENST00000491408 475 ntTSL 34.42□□□□□ -1.78e-11■□□□□ 9.2
PRPF8Q6P2Q9 SDHB-206ENST00000485092 636 ntTSL 23.99□□□□□ -1.773e-7■□□□□ 9.2
PRPF8Q6P2Q9 TPM4-203ENST00000586193 545 ntTSL 33.56□□□□□ -1.843e-7■□□□□ 9.2
PRPF8Q6P2Q9 MKLN1-207ENST00000468830 563 ntTSL 22.88□□□□□ -1.953e-7■□□□□ 9.2
PRPF8Q6P2Q9 NUP188-210ENST00000495726 516 ntTSL 22.87□□□□□ -1.953e-7■□□□□ 9.2
PRPF8Q6P2Q9 HSPE1-204ENST00000463841 700 ntTSL 22.2□□□□□ -2.063e-7■□□□□ 9.2
PRPF8Q6P2Q9 SDHB-204ENST00000475049 397 ntTSL 32.06□□□□□ -2.083e-7■□□□□ 9.2
PRPF8Q6P2Q9 EHMT1-226ENST00000635783 100 ntTSL 50.65□□□□□ -2.33e-7■□□□□ 9.2
PRPF8Q6P2Q9 ATP13A3-210ENST00000497567 532 ntTSL 40.41□□□□□ -2.343e-7■□□□□ 9.2
PRPF8Q6P2Q9 NHSL1-208ENST00000533765 568 ntAPPRIS ALT2 TSL 46.09□□□□□ -1.439e-8■□□□□ 9.2
PRPF8Q6P2Q9 NHSL1-206ENST00000479393 471 ntTSL 53.61□□□□□ -1.839e-8■□□□□ 9.2
PRPF8Q6P2Q9 SMARCC2-206ENST00000549209 439 ntTSL 57.05□□□□□ -1.289e-7■□□□□ 9.2
PRPF8Q6P2Q9 ZNF217-204ENST00000437222 746 ntTSL 28.09□□□□□ -1.112e-13■□□□□ 9.2
PRPF8Q6P2Q9 FARP1-203ENST00000423063 764 ntTSL 28.48□□□□□ -1.052e-14■□□□□ 9.2
PRPF8Q6P2Q9 MBOAT2-210ENST00000494760 525 ntTSL 33.67□□□□□ -1.824e-7■□□□□ 9.1
PRPF8Q6P2Q9 COBLL1-221ENST00000493868 6332 ntTSL 1 (best)5.96□□□□□ -1.468e-8■□□□□ 9.1
PRPF8Q6P2Q9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17■□□□□ 0.315e-14■□□□□ 9.1
PRPF8Q6P2Q9 ASMTL-AS1-204ENST00000443929 574 ntTSL 213.6□□□□□ -0.235e-14■□□□□ 9.1
PRPF8Q6P2Q9 DEAF1-204ENST00000525904 797 ntTSL 310.86□□□□□ -0.673e-6■□□□□ 9.1
PRPF8Q6P2Q9 PATZ1-205ENST00000465287 1702 ntTSL 213.44□□□□□ -0.262e-9■□□□□ 9.1
PRPF8Q6P2Q9 PATZ1-206ENST00000494109 835 ntTSL 29.87□□□□□ -0.832e-9■□□□□ 9.1
PRPF8Q6P2Q9 KLC1-221ENST00000556986 1150 ntTSL 1 (best)18.39■□□□□ 0.534e-9■□□□□ 9.1
PRPF8Q6P2Q9 DAZAP1-209ENST00000590419 508 ntTSL 312.58□□□□□ -0.43e-7■□□□□ 9.1
PRPF8Q6P2Q9 DAZAP1-206ENST00000587833 560 ntTSL 58.61□□□□□ -1.033e-7■□□□□ 9.1
PRPF8Q6P2Q9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.581e-8■□□□□ 9.1
PRPF8Q6P2Q9 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.741e-8■□□□□ 9.1
PRPF8Q6P2Q9 FASN-213ENST00000637693 100 ntTSL 57.75□□□□□ -1.173e-25■□□□□ 9.1
PRPF8Q6P2Q9 PARPBP-211ENST00000541668 1061 ntTSL 214.14□□□□□ -0.153e-6■□□□□ 9.1
PRPF8Q6P2Q9 TMEM74B-203ENST00000481747 582 ntTSL 223.96■■□□□ 1.431e-9■□□□□ 9.1
PRPF8Q6P2Q9 SNAP23-212ENST00000566141 647 ntTSL 217.61■□□□□ 0.412e-7■□□□□ 9.1
PRPF8Q6P2Q9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.282e-7■□□□□ 9.1
PRPF8Q6P2Q9 C11orf98-203ENST00000532786 774 ntTSL 214.46□□□□□ -0.12e-7■□□□□ 9.1
PRPF8Q6P2Q9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.282e-7■□□□□ 9.1
PRPF8Q6P2Q9 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.19□□□□□ -0.32e-7■□□□□ 9.1
PRPF8Q6P2Q9 AC124068.2-201ENST00000569473 1109 ntBASIC11.91□□□□□ -0.52e-7■□□□□ 9.1
PRPF8Q6P2Q9 JMJD8-205ENST00000564436 633 ntTSL 310.38□□□□□ -0.752e-12■□□□□ 9.1
PRPF8Q6P2Q9 JMJD8-206ENST00000565258 497 ntTSL 210.01□□□□□ -0.812e-12■□□□□ 9.1
PRPF8Q6P2Q9 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.04□□□□□ -1.282e-7■□□□□ 9.1
PRPF8Q6P2Q9 DDHD2-217ENST00000528888 861 ntTSL 34.91□□□□□ -1.622e-7■□□□□ 9.1
PRPF8Q6P2Q9 DDHD2-221ENST00000531344 574 ntTSL 21.9□□□□□ -2.112e-7■□□□□ 9.1
PRPF8Q6P2Q9 SNAP23-215ENST00000568227 599 ntTSL 40.32□□□□□ -2.362e-7■□□□□ 9.1
PRPF8Q6P2Q9 SNAP23-206ENST00000563451 595 ntTSL 30.31□□□□□ -2.362e-7■□□□□ 9.1
PRPF8Q6P2Q9 TMEM94-208ENST00000578853 905 ntTSL 312.78□□□□□ -0.364e-7■□□□□ 9.1
PRPF8Q6P2Q9 PROC-207ENST00000431364 566 ntTSL 410.86□□□□□ -0.677e-18■□□□□ 9.1
PRPF8Q6P2Q9 PROC-205ENST00000427769 598 ntTSL 49.57□□□□□ -0.887e-18■□□□□ 9.1
PRPF8Q6P2Q9 DDX19A-211ENST00000568779 730 ntTSL 25.88□□□□□ -1.477e-8■□□□□ 9.1
PRPF8Q6P2Q9 EDEM1-203ENST00000443790 730 ntTSL 217.21■□□□□ 0.354e-8■□□□□ 9.1
PRPF8Q6P2Q9 TFDP1-204ENST00000464794 447 ntTSL 1 (best)15.72■□□□□ 0.114e-8■□□□□ 9.1
PRPF8Q6P2Q9 MAPKAPK5-201ENST00000546394 567 ntTSL 315.47■□□□□ 0.074e-8■□□□□ 9.1
PRPF8Q6P2Q9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.59□□□□□ -0.074e-8■□□□□ 9.1
PRPF8Q6P2Q9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.57□□□□□ -0.244e-8■□□□□ 9.1
PRPF8Q6P2Q9 CBX5-206ENST00000618078 2627 ntTSL 211.92□□□□□ -0.54e-8■□□□□ 9.1
PRPF8Q6P2Q9 TRIO-205ENST00000503399 553 ntTSL 211.53□□□□□ -0.564e-8■□□□□ 9.1
PRPF8Q6P2Q9 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC10.91□□□□□ -0.664e-8■□□□□ 9.1
PRPF8Q6P2Q9 AP4S1-203ENST00000334725 1122 ntTSL 1 (best) BASIC10.13□□□□□ -0.794e-8■□□□□ 9.1
PRPF8Q6P2Q9 UQCC1-215ENST00000472559 1921 ntTSL 1 (best)9.92□□□□□ -0.824e-8■□□□□ 9.1
PRPF8Q6P2Q9 AP4S1-205ENST00000554345 1491 ntTSL 3 BASIC9.62□□□□□ -0.874e-8■□□□□ 9.1
PRPF8Q6P2Q9 TRIP12-210ENST00000453485 652 ntTSL 39.61□□□□□ -0.874e-8■□□□□ 9.1
PRPF8Q6P2Q9 UQCC1-221ENST00000496812 801 ntTSL 39.23□□□□□ -0.934e-8■□□□□ 9.1
PRPF8Q6P2Q9 EFTUD2-224ENST00000592701 562 ntTSL 48.71□□□□□ -1.024e-8■□□□□ 9.1
PRPF8Q6P2Q9 AP4S1-206ENST00000554609 1012 ntTSL 5 BASIC8.65□□□□□ -1.024e-8■□□□□ 9.1
PRPF8Q6P2Q9 AP4S1-208ENST00000556232 542 ntTSL 48.35□□□□□ -1.074e-8■□□□□ 9.1
PRPF8Q6P2Q9 AP4S1-201ENST00000216366 2256 ntTSL 1 (best) BASIC8.17□□□□□ -1.14e-8■□□□□ 9.1
PRPF8Q6P2Q9 DYNC1H1-207ENST00000555800 474 ntTSL 28.11□□□□□ -1.114e-8■□□□□ 9.1
PRPF8Q6P2Q9 USP11-211ENST00000489111 516 ntTSL 37.92□□□□□ -1.144e-8■□□□□ 9.1
PRPF8Q6P2Q9 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.184e-8■□□□□ 9.1
Retrieved 100 of 73,762 protein–RNA pairs in 459 ms