RNA–Protein interactions for RNA: ENST00000423063.2

FARP1-203, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-203ENST00000423063 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
FARP1-203ENST00000423063 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
FARP1-203ENST00000423063 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
FARP1-203ENST00000423063 NISCHQ9Y2I1 1504 aa24.18■■□□□ 1.46
FARP1-203ENST00000423063 PHF23Q9BUL5 403 aaPredicted RBP23.85■■□□□ 1.41
FARP1-203ENST00000423063 FOXD1Q16676 465 aa22.47■■□□□ 1.19
FARP1-203ENST00000423063 ABCC9O60706 1549 aa21.85■■□□□ 1.09
FARP1-203ENST00000423063 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
FARP1-203ENST00000423063 PLPPR3Q6T4P5 718 aa21.59■■□□□ 1.05
FARP1-203ENST00000423063 MSH5O43196 834 aa21.1■□□□□ 0.97
FARP1-203ENST00000423063 PIAS4Q8N2W9 510 aaPredicted RBP21.04■□□□□ 0.96
FARP1-203ENST00000423063 PPP6R1Q9UPN7 881 aa21■□□□□ 0.95
FARP1-203ENST00000423063 ADRA2BP18089 450 aa20.97■□□□□ 0.95
FARP1-203ENST00000423063 RB1CC1Q8TDY2 1594 aa20.72■□□□□ 0.91
FARP1-203ENST00000423063 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
FARP1-203ENST00000423063 NACADO15069 1562 aa20.55■□□□□ 0.88
FARP1-203ENST00000423063 DCAF8L2P0C7V8 631 aa20.44■□□□□ 0.86
FARP1-203ENST00000423063 POTEDQ86YR6 584 aa20.42■□□□□ 0.86
FARP1-203ENST00000423063 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
FARP1-203ENST00000423063 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.853e-7■□□□□ 8
FARP1-203ENST00000423063 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
FARP1-203ENST00000423063 BICRAQ9NZM4 1560 aa20.19■□□□□ 0.82
FARP1-203ENST00000423063 ZCCHC6Q5VYS8 1495 aaKnown RBP20.02■□□□□ 0.8
FARP1-203ENST00000423063 DCAF1Q9Y4B6 1507 aa19.93■□□□□ 0.78
FARP1-203ENST00000423063 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
FARP1-203ENST00000423063 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
FARP1-203ENST00000423063 CC2D2AQ9P2K1 1620 aa19.74■□□□□ 0.75
FARP1-203ENST00000423063 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
FARP1-203ENST00000423063 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
FARP1-203ENST00000423063 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
FARP1-203ENST00000423063 MAPK8IP2Q13387 824 aaPredicted RBP19.24■□□□□ 0.67
FARP1-203ENST00000423063 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
FARP1-203ENST00000423063 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
FARP1-203ENST00000423063 DNAJC5Q9H3Z4 198 aa18.95■□□□□ 0.62
FARP1-203ENST00000423063 ATAD2BQ9ULI0 1458 aa18.93■□□□□ 0.62
FARP1-203ENST00000423063 SMARCA4P51532 1647 aa18.9■□□□□ 0.62
FARP1-203ENST00000423063 PPP4R3CPQ6ZMV5 832 aa18.9■□□□□ 0.62
FARP1-203ENST00000423063 SMARCA2P51531 1590 aa18.84■□□□□ 0.61
FARP1-203ENST00000423063 HMGXB3Q12766 1538 aa18.83■□□□□ 0.6
FARP1-203ENST00000423063 CUX2O14529 1486 aa18.83■□□□□ 0.6
FARP1-203ENST00000423063 ERCC6Q03468 1493 aa18.83■□□□□ 0.6
FARP1-203ENST00000423063 NESP48681 1621 aa18.78■□□□□ 0.6
FARP1-203ENST00000423063 BAZ1AQ9NRL2 1556 aaPredicted RBP18.75■□□□□ 0.59
FARP1-203ENST00000423063 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
FARP1-203ENST00000423063 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
FARP1-203ENST00000423063 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
FARP1-203ENST00000423063 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
FARP1-203ENST00000423063 LAMC3Q9Y6N6 1575 aa18.56■□□□□ 0.56
FARP1-203ENST00000423063 CNKSR2Q8WXI2 1034 aa18.56■□□□□ 0.56
FARP1-203ENST00000423063 KIF21AQ7Z4S6 1674 aa18.54■□□□□ 0.56
FARP1-203ENST00000423063 HOXD11P31277 338 aaPredicted RBP18.47■□□□□ 0.55
FARP1-203ENST00000423063 WIZO95785 1651 aa18.45■□□□□ 0.54
FARP1-203ENST00000423063 PDS5BQ9NTI5 1447 aa18.43■□□□□ 0.54
FARP1-203ENST00000423063 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
FARP1-203ENST00000423063 CADPSQ9ULU8 1353 aa18.4■□□□□ 0.54
FARP1-203ENST00000423063 RNF216Q9NWF9 866 aaPredicted RBP18.37■□□□□ 0.53
FARP1-203ENST00000423063 MRC2Q9UBG0 1479 aa18.31■□□□□ 0.52
FARP1-203ENST00000423063 NCBP3Q53F19 620 aaKnown RBP18.28■□□□□ 0.52
FARP1-203ENST00000423063 WDR62O43379 1518 aa18.28■□□□□ 0.52
FARP1-203ENST00000423063 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
FARP1-203ENST00000423063 CEP164Q9UPV0 1460 aa18.21■□□□□ 0.51
FARP1-203ENST00000423063 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
FARP1-203ENST00000423063 CFTRP13569 1480 aa18.18■□□□□ 0.5
FARP1-203ENST00000423063 TOP2AP11388 1531 aaKnown RBP18.16■□□□□ 0.5
FARP1-203ENST00000423063 URB2Q14146 1524 aaKnown RBP18.09■□□□□ 0.49
FARP1-203ENST00000423063 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
FARP1-203ENST00000423063 CACNB1Q02641 598 aaPredicted RBP18.07■□□□□ 0.48
FARP1-203ENST00000423063 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
FARP1-203ENST00000423063 CCDC88BA6NC98 1476 aa17.97■□□□□ 0.47
FARP1-203ENST00000423063 RNF39Q9H2S5 420 aa17.95■□□□□ 0.46
FARP1-203ENST00000423063 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
FARP1-203ENST00000423063 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
FARP1-203ENST00000423063 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
FARP1-203ENST00000423063 TOPBP1Q92547 1522 aa17.86■□□□□ 0.45
FARP1-203ENST00000423063 IFT140Q96RY7 1462 aa17.84■□□□□ 0.45
FARP1-203ENST00000423063 RIMBP3CA6NJZ7 1639 aa17.79■□□□□ 0.44
FARP1-203ENST00000423063 RIMBP3BA6NNM3 1639 aa17.79■□□□□ 0.44
FARP1-203ENST00000423063 RIMBP3Q9UFD9 1639 aa17.79■□□□□ 0.44
FARP1-203ENST00000423063 DNMBPQ6XZF7 1577 aa17.77■□□□□ 0.44
FARP1-203ENST00000423063 EIF4G3O43432 1585 aaKnown RBP17.76■□□□□ 0.43
FARP1-203ENST00000423063 C1QBPQ07021 282 aaKnown RBP17.75■□□□□ 0.43
FARP1-203ENST00000423063 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
FARP1-203ENST00000423063 TARBP1Q13395 1621 aaKnown RBP17.72■□□□□ 0.43
FARP1-203ENST00000423063 AQRO60306 1485 aaKnown RBP eCLIP17.7■□□□□ 0.421e-9■■■□□ 16.8
FARP1-203ENST00000423063 ARHGEF11O15085 1522 aa17.7■□□□□ 0.42
FARP1-203ENST00000423063 CHD1O14646 1710 aa17.69■□□□□ 0.42
FARP1-203ENST00000423063 POLA1P09884 1462 aaPredicted RBP17.67■□□□□ 0.42
FARP1-203ENST00000423063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.423e-11■□□□□ 8
FARP1-203ENST00000423063 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
FARP1-203ENST00000423063 SUPT5HO00267 1087 aaKnown RBP17.57■□□□□ 0.4
FARP1-203ENST00000423063 KCNA4P22459 653 aa17.57■□□□□ 0.4
FARP1-203ENST00000423063 FBLN2P98095 1184 aa17.57■□□□□ 0.4
FARP1-203ENST00000423063 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
FARP1-203ENST00000423063 SOGA1O94964 1423 aa17.56■□□□□ 0.4
FARP1-203ENST00000423063 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
FARP1-203ENST00000423063 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
FARP1-203ENST00000423063 CUX1P39880 1505 aa17.54■□□□□ 0.4
FARP1-203ENST00000423063 ARAP1Q96P48 1450 aa17.54■□□□□ 0.4
FARP1-203ENST00000423063 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
FARP1-203ENST00000423063 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms