RNA–Protein interactions for RNA: ENST00000563451.1

SNAP23-206, Transcript of synaptosome associated protein 23, humanhuman

TSL 3

Gene SNAP23, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-206ENST00000563451 AEBP2Q6ZN18 517 aaPredicted RBP24.25■■□□□ 1.47
SNAP23-206ENST00000563451 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
SNAP23-206ENST00000563451 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
SNAP23-206ENST00000563451 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
SNAP23-206ENST00000563451 FOXD1Q16676 465 aa19.3■□□□□ 0.68
SNAP23-206ENST00000563451 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
SNAP23-206ENST00000563451 MSH5O43196 834 aa18.12■□□□□ 0.49
SNAP23-206ENST00000563451 PIAS4Q8N2W9 510 aaPredicted RBP18.06■□□□□ 0.48
SNAP23-206ENST00000563451 PPP6R1Q9UPN7 881 aa18.03■□□□□ 0.48
SNAP23-206ENST00000563451 ADRA2BP18089 450 aa17.98■□□□□ 0.47
SNAP23-206ENST00000563451 POTEDQ86YR6 584 aa17.6■□□□□ 0.41
SNAP23-206ENST00000563451 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
SNAP23-206ENST00000563451 MAPK8IP2Q13387 824 aaPredicted RBP16.5■□□□□ 0.23
SNAP23-206ENST00000563451 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
SNAP23-206ENST00000563451 PPP4R3CPQ6ZMV5 832 aa16.18■□□□□ 0.18
SNAP23-206ENST00000563451 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
SNAP23-206ENST00000563451 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
SNAP23-206ENST00000563451 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
SNAP23-206ENST00000563451 RNF216Q9NWF9 866 aaPredicted RBP15.75■□□□□ 0.11
SNAP23-206ENST00000563451 NCBP3Q53F19 620 aaKnown RBP15.61■□□□□ 0.09
SNAP23-206ENST00000563451 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
SNAP23-206ENST00000563451 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
SNAP23-206ENST00000563451 DNAJC5BQ9UF47 199 aa15.36■□□□□ 0.05
SNAP23-206ENST00000563451 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
SNAP23-206ENST00000563451 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
SNAP23-206ENST00000563451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNAP23-206ENST00000563451 KCNA4P22459 653 aa15.02■□□□□ -0
SNAP23-206ENST00000563451 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
SNAP23-206ENST00000563451 SLC4A2P04920 1241 aa14.61□□□□□ -0.07
SNAP23-206ENST00000563451 CAPN15O75808 1086 aa14.54□□□□□ -0.08
SNAP23-206ENST00000563451 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
SNAP23-206ENST00000563451 DSG3P32926 999 aa14.45□□□□□ -0.1
SNAP23-206ENST00000563451 APLP2Q06481 763 aa14.45□□□□□ -0.1
SNAP23-206ENST00000563451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.43□□□□□ -0.1
SNAP23-206ENST00000563451 HNRNPUL2Q1KMD3 747 aaKnown RBP14.43□□□□□ -0.1
SNAP23-206ENST00000563451 SAMD1Q6SPF0 538 aaPredicted RBP14.32□□□□□ -0.12
SNAP23-206ENST00000563451 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
SNAP23-206ENST00000563451 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
SNAP23-206ENST00000563451 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.13
SNAP23-206ENST00000563451 SLC4A1APQ9BWU0 796 aaKnown RBP14.21□□□□□ -0.13
SNAP23-206ENST00000563451 ABCB7O75027 752 aa14.16□□□□□ -0.14
SNAP23-206ENST00000563451 FOXD4L1Q9NU39 408 aa14.06□□□□□ -0.16
SNAP23-206ENST00000563451 POLA2Q14181 598 aa13.92□□□□□ -0.18
SNAP23-206ENST00000563451 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
SNAP23-206ENST00000563451 POTEHQ6S545 545 aa13.82□□□□□ -0.2
SNAP23-206ENST00000563451 ATF5Q9Y2D1 282 aaPredicted RBP13.8□□□□□ -0.2
SNAP23-206ENST00000563451 ZBTB22O15209 634 aa13.78□□□□□ -0.2
SNAP23-206ENST00000563451 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
SNAP23-206ENST00000563451 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
SNAP23-206ENST00000563451 AKT1S1Q96B36 256 aa13.51□□□□□ -0.25
SNAP23-206ENST00000563451 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
SNAP23-206ENST00000563451 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
SNAP23-206ENST00000563451 FBLN2P98095 1184 aa13.35□□□□□ -0.27
SNAP23-206ENST00000563451 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
SNAP23-206ENST00000563451 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
SNAP23-206ENST00000563451 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
SNAP23-206ENST00000563451 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
SNAP23-206ENST00000563451 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
SNAP23-206ENST00000563451 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
SNAP23-206ENST00000563451 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
SNAP23-206ENST00000563451 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
SNAP23-206ENST00000563451 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNAP23-206ENST00000563451 ZNF692Q9BU19 519 aaPredicted RBP13.08□□□□□ -0.32
SNAP23-206ENST00000563451 SSUH2Q9Y2M2 353 aa13.06□□□□□ -0.32
SNAP23-206ENST00000563451 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
SNAP23-206ENST00000563451 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
SNAP23-206ENST00000563451 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
SNAP23-206ENST00000563451 SP7Q8TDD2 431 aaPredicted RBP12.96□□□□□ -0.33
SNAP23-206ENST00000563451 HAX1O00165 279 aa12.93□□□□□ -0.34
SNAP23-206ENST00000563451 PABPN1Q86U42 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNAP23-206ENST00000563451 PRKAR2AP13861 404 aaKnown RBP12.87□□□□□ -0.35
SNAP23-206ENST00000563451 PRR29P0C7W0 189 aa12.78□□□□□ -0.36
SNAP23-206ENST00000563451 EVX2Q03828 476 aa12.71□□□□□ -0.37
SNAP23-206ENST00000563451 CHADLQ6NUI6 762 aa12.69□□□□□ -0.38
SNAP23-206ENST00000563451 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
SNAP23-206ENST00000563451 SPDYE4A6NLX3 237 aa12.61□□□□□ -0.39
SNAP23-206ENST00000563451 STAG3Q9UJ98 1225 aa12.59□□□□□ -0.39
SNAP23-206ENST00000563451 FARP1Q9Y4F1 1045 aaPredicted RBP12.54□□□□□ -0.4
SNAP23-206ENST00000563451 GABBR2O75899 941 aa12.47□□□□□ -0.41
SNAP23-206ENST00000563451 CD44P16070 742 aaKnown RBP12.46□□□□□ -0.41
SNAP23-206ENST00000563451 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
SNAP23-206ENST00000563451 CLCN6P51797 869 aa12.38□□□□□ -0.43
SNAP23-206ENST00000563451 PROM2Q8N271 834 aa12.3□□□□□ -0.44
SNAP23-206ENST00000563451 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
SNAP23-206ENST00000563451 ZNF579Q8NAF0 562 aaKnown RBP12.28□□□□□ -0.44
SNAP23-206ENST00000563451 NPM1P06748 294 aaKnown RBP eCLIP12.27□□□□□ -0.45
SNAP23-206ENST00000563451 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
SNAP23-206ENST00000563451 MNX1P50219 401 aaPredicted RBP12.21□□□□□ -0.45
SNAP23-206ENST00000563451 POTEIP0CG38 1075 aa12.18□□□□□ -0.46
SNAP23-206ENST00000563451 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
SNAP23-206ENST00000563451 LHX8Q68G74 356 aa12.16□□□□□ -0.46
SNAP23-206ENST00000563451 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
SNAP23-206ENST00000563451 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
SNAP23-206ENST00000563451 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
SNAP23-206ENST00000563451 MIER1Q8N108 512 aa12.04□□□□□ -0.48
SNAP23-206ENST00000563451 TSPYL2Q9H2G4 693 aaPredicted RBP11.99□□□□□ -0.49
SNAP23-206ENST00000563451 FKBP8Q14318 412 aa11.97□□□□□ -0.49
SNAP23-206ENST00000563451 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
SNAP23-206ENST00000563451 MS4A3Q96HJ5 214 aa11.94□□□□□ -0.5
SNAP23-206ENST00000563451 CCDC61Q9Y6R9 512 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms