RNA–Protein interactions for RNA: ENST00000568227.5

SNAP23-215, Transcript of synaptosome associated protein 23, humanhuman

TSL 4

Gene SNAP23, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-215ENST00000568227 AEBP2Q6ZN18 517 aaPredicted RBP18.36■□□□□ 0.53
SNAP23-215ENST00000568227 CHIC1Q5VXU3 224 aa17.27■□□□□ 0.36
SNAP23-215ENST00000568227 SENP3Q9H4L4 574 aaPredicted RBP15.87■□□□□ 0.13
SNAP23-215ENST00000568227 PHF23Q9BUL5 403 aaPredicted RBP15.51■□□□□ 0.07
SNAP23-215ENST00000568227 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
SNAP23-215ENST00000568227 FOXD1Q16676 465 aa14.79□□□□□ -0.04
SNAP23-215ENST00000568227 MSH5O43196 834 aa14.18□□□□□ -0.14
SNAP23-215ENST00000568227 PIAS4Q8N2W9 510 aaPredicted RBP13.72□□□□□ -0.21
SNAP23-215ENST00000568227 PPP6R1Q9UPN7 881 aa13.29□□□□□ -0.28
SNAP23-215ENST00000568227 ADRA2BP18089 450 aa13.24□□□□□ -0.29
SNAP23-215ENST00000568227 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
SNAP23-215ENST00000568227 CACNB1Q02641 598 aaPredicted RBP12.53□□□□□ -0.4
SNAP23-215ENST00000568227 DMRT2Q9Y5R5 561 aa12.45□□□□□ -0.42
SNAP23-215ENST00000568227 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
SNAP23-215ENST00000568227 SCAF1Q9H7N4 1312 aaKnown RBP12.23□□□□□ -0.45
SNAP23-215ENST00000568227 DCAF8L1A6NGE4 600 aa11.99□□□□□ -0.49
SNAP23-215ENST00000568227 RNF39Q9H2S5 420 aa11.99□□□□□ -0.49
SNAP23-215ENST00000568227 C1QBPQ07021 282 aaKnown RBP11.81□□□□□ -0.52
SNAP23-215ENST00000568227 HOXD11P31277 338 aaPredicted RBP11.75□□□□□ -0.53
SNAP23-215ENST00000568227 POTEHQ6S545 545 aa11.53□□□□□ -0.56
SNAP23-215ENST00000568227 RNF216Q9NWF9 866 aaPredicted RBP11.51□□□□□ -0.57
SNAP23-215ENST00000568227 DNAJC5BQ9UF47 199 aa11.51□□□□□ -0.57
SNAP23-215ENST00000568227 PPP4R3CPQ6ZMV5 832 aa11.48□□□□□ -0.57
SNAP23-215ENST00000568227 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
SNAP23-215ENST00000568227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.21□□□□□ -0.61
SNAP23-215ENST00000568227 NCBP3Q53F19 620 aaKnown RBP11.13□□□□□ -0.63
SNAP23-215ENST00000568227 DSG3P32926 999 aa11.01□□□□□ -0.65
SNAP23-215ENST00000568227 CAPN15O75808 1086 aa10.95□□□□□ -0.66
SNAP23-215ENST00000568227 NPM3O75607 178 aaKnown RBP10.88□□□□□ -0.67
SNAP23-215ENST00000568227 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
SNAP23-215ENST00000568227 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
SNAP23-215ENST00000568227 KCNA4P22459 653 aa10.81□□□□□ -0.68
SNAP23-215ENST00000568227 APLP2Q06481 763 aa10.62□□□□□ -0.71
SNAP23-215ENST00000568227 ZNF219Q9P2Y4 722 aaPredicted RBP10.62□□□□□ -0.71
SNAP23-215ENST00000568227 RBM42Q9BTD8 480 aaKnown RBP10.61□□□□□ -0.71
SNAP23-215ENST00000568227 ABCB7O75027 752 aa10.6□□□□□ -0.71
SNAP23-215ENST00000568227 TRHP20396 242 aaPredicted RBP10.6□□□□□ -0.71
SNAP23-215ENST00000568227 CHRDL2Q6WN34 429 aa10.57□□□□□ -0.72
SNAP23-215ENST00000568227 SP7Q8TDD2 431 aaPredicted RBP10.52□□□□□ -0.73
SNAP23-215ENST00000568227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.43□□□□□ -0.74
SNAP23-215ENST00000568227 HNRNPUL2Q1KMD3 747 aaKnown RBP10.43□□□□□ -0.74
SNAP23-215ENST00000568227 SLC4A2P04920 1241 aa10.34□□□□□ -0.75
SNAP23-215ENST00000568227 SAMD1Q6SPF0 538 aaPredicted RBP10.32□□□□□ -0.76
SNAP23-215ENST00000568227 SLC4A1APQ9BWU0 796 aaKnown RBP10.29□□□□□ -0.76
SNAP23-215ENST00000568227 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
SNAP23-215ENST00000568227 HAX1O00165 279 aa10.17□□□□□ -0.78
SNAP23-215ENST00000568227 POLA2Q14181 598 aa10.15□□□□□ -0.78
SNAP23-215ENST00000568227 PIP4P2Q8N4L2 257 aa10.15□□□□□ -0.78
SNAP23-215ENST00000568227 MYCNP04198 464 aaPredicted RBP10.11□□□□□ -0.79
SNAP23-215ENST00000568227 FOXD4L1Q9NU39 408 aa10.1□□□□□ -0.79
SNAP23-215ENST00000568227 REM2Q8IYK8 340 aaPredicted RBP10.05□□□□□ -0.8
SNAP23-215ENST00000568227 FXR2P51116 673 aaKnown RBP eCLIP9.99□□□□□ -0.81
SNAP23-215ENST00000568227 ZBTB12Q9Y330 459 aaPredicted RBP9.99□□□□□ -0.81
SNAP23-215ENST00000568227 PITPNM1O00562 1244 aa9.95□□□□□ -0.82
SNAP23-215ENST00000568227 ZBTB22O15209 634 aa9.92□□□□□ -0.82
SNAP23-215ENST00000568227 EVX2Q03828 476 aa9.9□□□□□ -0.82
SNAP23-215ENST00000568227 OSCARQ8IYS5 282 aa9.87□□□□□ -0.83
SNAP23-215ENST00000568227 LHX8Q68G74 356 aa9.85□□□□□ -0.83
SNAP23-215ENST00000568227 ATXN8OSP0DMR3 200 aa9.83□□□□□ -0.84
SNAP23-215ENST00000568227 PLSCR2Q9NRY7 297 aa9.77□□□□□ -0.85
SNAP23-215ENST00000568227 ATF5Q9Y2D1 282 aaPredicted RBP9.76□□□□□ -0.85
SNAP23-215ENST00000568227 C19orf67A6NJJ6 358 aa9.7□□□□□ -0.86
SNAP23-215ENST00000568227 GABBR2O75899 941 aa9.7□□□□□ -0.86
SNAP23-215ENST00000568227 PRKAR2AP13861 404 aaKnown RBP9.7□□□□□ -0.86
SNAP23-215ENST00000568227 CSRNP3Q8WYN3 585 aa9.67□□□□□ -0.86
SNAP23-215ENST00000568227 EHMT2Q96KQ7 1210 aa9.61□□□□□ -0.87
SNAP23-215ENST00000568227 SPDYE2BA6NHP3 402 aa9.6□□□□□ -0.87
SNAP23-215ENST00000568227 SPDYE6P0CI01 402 aa9.6□□□□□ -0.87
SNAP23-215ENST00000568227 SPDYE2Q495Y8 402 aa9.6□□□□□ -0.87
SNAP23-215ENST00000568227 SPDYE1Q8NFV5 336 aaPredicted RBP9.59□□□□□ -0.87
SNAP23-215ENST00000568227 CLEC11AQ9Y240 323 aa9.58□□□□□ -0.88
SNAP23-215ENST00000568227 FBLN2P98095 1184 aa9.48□□□□□ -0.89
SNAP23-215ENST00000568227 POTEIP0CG38 1075 aa9.45□□□□□ -0.9
SNAP23-215ENST00000568227 CLCN6P51797 869 aa9.43□□□□□ -0.9
SNAP23-215ENST00000568227 CHADLQ6NUI6 762 aa9.42□□□□□ -0.9
SNAP23-215ENST00000568227 CD44P16070 742 aaKnown RBP9.37□□□□□ -0.91
SNAP23-215ENST00000568227 DCBLD2Q96PD2 775 aa9.37□□□□□ -0.91
SNAP23-215ENST00000568227 SSUH2Q9Y2M2 353 aa9.36□□□□□ -0.91
SNAP23-215ENST00000568227 MKRN4PQ13434 485 aaPredicted RBP9.35□□□□□ -0.91
SNAP23-215ENST00000568227 ZNF692Q9BU19 519 aaPredicted RBP9.35□□□□□ -0.91
SNAP23-215ENST00000568227 PRR29P0C7W0 189 aa9.34□□□□□ -0.91
SNAP23-215ENST00000568227 POTEMA6NI47 508 aa9.32□□□□□ -0.92
SNAP23-215ENST00000568227 POTEGQ6S5H5 508 aa9.26□□□□□ -0.93
SNAP23-215ENST00000568227 OTUD5Q96G74 571 aa9.25□□□□□ -0.93
SNAP23-215ENST00000568227 FARP1Q9Y4F1 1045 aaPredicted RBP9.25□□□□□ -0.93
SNAP23-215ENST00000568227 PCDH10Q9P2E7 1040 aa9.24□□□□□ -0.93
SNAP23-215ENST00000568227 ZNF579Q8NAF0 562 aaKnown RBP9.2□□□□□ -0.94
SNAP23-215ENST00000568227 PABPN1Q86U42 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNAP23-215ENST00000568227 ZRANB1Q9UGI0 708 aa9.13□□□□□ -0.95
SNAP23-215ENST00000568227 POTEB2H3BUK9 544 aa9.12□□□□□ -0.95
SNAP23-215ENST00000568227 GALR2O43603 387 aaPredicted RBP9.09□□□□□ -0.95
SNAP23-215ENST00000568227 SPDYE4A6NLX3 237 aa9.04□□□□□ -0.96
SNAP23-215ENST00000568227 MAMSTRQ6ZN01 415 aa9□□□□□ -0.97
SNAP23-215ENST00000568227 PAK3O75914 559 aaPredicted RBP8.99□□□□□ -0.97
SNAP23-215ENST00000568227 STAG3Q9UJ98 1225 aa8.98□□□□□ -0.97
SNAP23-215ENST00000568227 METRNQ9UJH8 293 aa8.95□□□□□ -0.98
SNAP23-215ENST00000568227 LCE2DQ5TA82 110 aaPredicted RBP8.94□□□□□ -0.98
SNAP23-215ENST00000568227 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
SNAP23-215ENST00000568227 SLC39A7Q92504 469 aa8.92□□□□□ -0.98
SNAP23-215ENST00000568227 FAM163AQ96GL9 167 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms