RNA–Protein interactions for RNA: ENST00000495726.1

NUP188-210, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 516 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-210ENST00000495726 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
NUP188-210ENST00000495726 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
NUP188-210ENST00000495726 PHF23Q9BUL5 403 aaPredicted RBP14.56□□□□□ -0.08
NUP188-210ENST00000495726 SENP3Q9H4L4 574 aaPredicted RBP14.55□□□□□ -0.08
NUP188-210ENST00000495726 FOXD1Q16676 465 aa13.62□□□□□ -0.23
NUP188-210ENST00000495726 PLPPR3Q6T4P5 718 aa13.28□□□□□ -0.28
NUP188-210ENST00000495726 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
NUP188-210ENST00000495726 ADRA2BP18089 450 aa12.95□□□□□ -0.34
NUP188-210ENST00000495726 PIAS4Q8N2W9 510 aaPredicted RBP12.78□□□□□ -0.36
NUP188-210ENST00000495726 MSH5O43196 834 aa12.55□□□□□ -0.4
NUP188-210ENST00000495726 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
NUP188-210ENST00000495726 MAPK8IP2Q13387 824 aaPredicted RBP11.85□□□□□ -0.51
NUP188-210ENST00000495726 PPP4R3CPQ6ZMV5 832 aa11.74□□□□□ -0.53
NUP188-210ENST00000495726 SCAF1Q9H7N4 1312 aaKnown RBP11.7□□□□□ -0.54
NUP188-210ENST00000495726 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
NUP188-210ENST00000495726 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
NUP188-210ENST00000495726 NCBP3Q53F19 620 aaKnown RBP11.29□□□□□ -0.6
NUP188-210ENST00000495726 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
NUP188-210ENST00000495726 HOXD11P31277 338 aaPredicted RBP11.24□□□□□ -0.61
NUP188-210ENST00000495726 KCNA4P22459 653 aa11.23□□□□□ -0.61
NUP188-210ENST00000495726 RNF216Q9NWF9 866 aaPredicted RBP11.22□□□□□ -0.61
NUP188-210ENST00000495726 NPM3O75607 178 aaKnown RBP11.18□□□□□ -0.62
NUP188-210ENST00000495726 EHMT2Q96KQ7 1210 aa10.95□□□□□ -0.66
NUP188-210ENST00000495726 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.79□□□□□ -0.68
NUP188-210ENST00000495726 RNF39Q9H2S5 420 aa10.77□□□□□ -0.69
NUP188-210ENST00000495726 CACNB1Q02641 598 aaPredicted RBP10.72□□□□□ -0.69
NUP188-210ENST00000495726 DNAJC5BQ9UF47 199 aa10.7□□□□□ -0.7
NUP188-210ENST00000495726 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
NUP188-210ENST00000495726 SLC4A1APQ9BWU0 796 aaKnown RBP10.64□□□□□ -0.71
NUP188-210ENST00000495726 CSRNP3Q8WYN3 585 aa10.59□□□□□ -0.71
NUP188-210ENST00000495726 C1QBPQ07021 282 aaKnown RBP10.58□□□□□ -0.72
NUP188-210ENST00000495726 U3KPZ7 1027 aaPredicted RBP10.58□□□□□ -0.72
NUP188-210ENST00000495726 SPINK5Q9NQ38 1064 aaPredicted RBP10.41□□□□□ -0.74
NUP188-210ENST00000495726 CAPN15O75808 1086 aa10.36□□□□□ -0.75
NUP188-210ENST00000495726 ZBTB22O15209 634 aa10.35□□□□□ -0.75
NUP188-210ENST00000495726 FOXD4L1Q9NU39 408 aa10.33□□□□□ -0.76
NUP188-210ENST00000495726 MYCNP04198 464 aaPredicted RBP10.3□□□□□ -0.76
NUP188-210ENST00000495726 TRHP20396 242 aaPredicted RBP10.27□□□□□ -0.77
NUP188-210ENST00000495726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
NUP188-210ENST00000495726 HNRNPUL2Q1KMD3 747 aaKnown RBP10.24□□□□□ -0.77
NUP188-210ENST00000495726 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
NUP188-210ENST00000495726 ABCB7O75027 752 aa10.2□□□□□ -0.78
NUP188-210ENST00000495726 DSG3P32926 999 aa10.19□□□□□ -0.78
NUP188-210ENST00000495726 APLP2Q06481 763 aa10.19□□□□□ -0.78
NUP188-210ENST00000495726 ATF5Q9Y2D1 282 aaPredicted RBP10.15□□□□□ -0.78
NUP188-210ENST00000495726 ZNF219Q9P2Y4 722 aaPredicted RBP10.14□□□□□ -0.79
NUP188-210ENST00000495726 POLA2Q14181 598 aa10.02□□□□□ -0.81
NUP188-210ENST00000495726 ATXN8OSP0DMR3 200 aa9.92□□□□□ -0.82
NUP188-210ENST00000495726 ZBTB12Q9Y330 459 aaPredicted RBP9.71□□□□□ -0.86
NUP188-210ENST00000495726 OSCARQ8IYS5 282 aa9.7□□□□□ -0.86
NUP188-210ENST00000495726 MKRN4PQ13434 485 aaPredicted RBP9.66□□□□□ -0.86
NUP188-210ENST00000495726 FBLN2P98095 1184 aa9.64□□□□□ -0.87
NUP188-210ENST00000495726 RBM42Q9BTD8 480 aaKnown RBP9.64□□□□□ -0.87
NUP188-210ENST00000495726 RTN4Q9NQC3 1192 aaKnown RBP9.58□□□□□ -0.88
NUP188-210ENST00000495726 FKBP8Q14318 412 aa9.53□□□□□ -0.88
NUP188-210ENST00000495726 AMER1Q5JTC6 1135 aaPredicted RBP9.53□□□□□ -0.88
NUP188-210ENST00000495726 AKT1S1Q96B36 256 aa9.5□□□□□ -0.89
NUP188-210ENST00000495726 SPDYE2BA6NHP3 402 aa9.47□□□□□ -0.89
NUP188-210ENST00000495726 SPDYE6P0CI01 402 aa9.47□□□□□ -0.89
NUP188-210ENST00000495726 SPDYE2Q495Y8 402 aa9.47□□□□□ -0.89
NUP188-210ENST00000495726 REM2Q8IYK8 340 aaPredicted RBP9.46□□□□□ -0.9
NUP188-210ENST00000495726 ZNF692Q9BU19 519 aaPredicted RBP9.46□□□□□ -0.9
NUP188-210ENST00000495726 SLC24A1O60721 1099 aa9.44□□□□□ -0.9
NUP188-210ENST00000495726 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
NUP188-210ENST00000495726 POTEHQ6S545 545 aa9.39□□□□□ -0.91
NUP188-210ENST00000495726 PITPNM1O00562 1244 aa9.38□□□□□ -0.91
NUP188-210ENST00000495726 SSUH2Q9Y2M2 353 aa9.38□□□□□ -0.91
NUP188-210ENST00000495726 PABPN1Q86U42 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
NUP188-210ENST00000495726 CLEC11AQ9Y240 323 aa9.33□□□□□ -0.92
NUP188-210ENST00000495726 SPDYE4A6NLX3 237 aa9.31□□□□□ -0.92
NUP188-210ENST00000495726 PIP4P2Q8N4L2 257 aa9.26□□□□□ -0.93
NUP188-210ENST00000495726 SPDYE1Q8NFV5 336 aaPredicted RBP9.26□□□□□ -0.93
NUP188-210ENST00000495726 FXR2P51116 673 aaKnown RBP eCLIP9.19□□□□□ -0.945e-9■■■■■ 36.3
NUP188-210ENST00000495726 PRR29P0C7W0 189 aa9.16□□□□□ -0.94
NUP188-210ENST00000495726 CHADLQ6NUI6 762 aa9.16□□□□□ -0.94
NUP188-210ENST00000495726 PRKAR2AP13861 404 aaKnown RBP9.14□□□□□ -0.95
NUP188-210ENST00000495726 HAX1O00165 279 aa9.05□□□□□ -0.96
NUP188-210ENST00000495726 PROM2Q8N271 834 aa9.04□□□□□ -0.96
NUP188-210ENST00000495726 STAG3Q9UJ98 1225 aa9.04□□□□□ -0.96
NUP188-210ENST00000495726 EVX2Q03828 476 aa9□□□□□ -0.97
NUP188-210ENST00000495726 CREBZFQ9NS37 354 aa8.99□□□□□ -0.97
NUP188-210ENST00000495726 FBXO3Q9UK99 471 aa8.99□□□□□ -0.97
NUP188-210ENST00000495726 FARP1Q9Y4F1 1045 aaPredicted RBP8.96□□□□□ -0.98
NUP188-210ENST00000495726 C19orf67A6NJJ6 358 aa8.9□□□□□ -0.98
NUP188-210ENST00000495726 VASPP50552 380 aaPredicted RBP8.9□□□□□ -0.98
NUP188-210ENST00000495726 SP7Q8TDD2 431 aaPredicted RBP8.9□□□□□ -0.98
NUP188-210ENST00000495726 MIER1Q8N108 512 aa8.88□□□□□ -0.99
NUP188-210ENST00000495726 CD44P16070 742 aaKnown RBP8.86□□□□□ -0.99
NUP188-210ENST00000495726 MNX1P50219 401 aaPredicted RBP8.85□□□□□ -0.99
NUP188-210ENST00000495726 IFNLR1Q8IU57 520 aaPredicted RBP8.84□□□□□ -0.99
NUP188-210ENST00000495726 PLCD3Q8N3E9 789 aa8.84□□□□□ -0.99
NUP188-210ENST00000495726 PLCB2Q00722 1185 aa8.8□□□□□ -1
NUP188-210ENST00000495726 ZRANB1Q9UGI0 708 aa8.79□□□□□ -1
NUP188-210ENST00000495726 NPM1P06748 294 aaKnown RBP eCLIP8.78□□□□□ -1
NUP188-210ENST00000495726 PLEKHG5O94827 1062 aa8.76□□□□□ -1.01
NUP188-210ENST00000495726 GABBR2O75899 941 aa8.75□□□□□ -1.01
NUP188-210ENST00000495726 DCAF8L2P0C7V8 631 aa8.74□□□□□ -1.01
NUP188-210ENST00000495726 PKD2Q13563 968 aa8.74□□□□□ -1.01
NUP188-210ENST00000495726 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
NUP188-210ENST00000495726 PHF12Q96QT6 1004 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms