Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MAPK10-357ENST00000641831 2858 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 MAPK10-270ENST00000641102 3538 ntBASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLIP2Q9UDT6 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 NEK2P4-201ENST00000425793 1329 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AL512310.3-201ENST00000547023 1335 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 RPL24P2-201ENST00000421023 475 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AC010086.1-201ENST00000437359 1052 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 CCNJP1-201ENST00000450600 1149 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 RN7SL649P-201ENST00000496974 275 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AC093816.1-201ENST00000515076 913 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AP000662.1-201ENST00000530952 487 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AC004232.1-201ENST00000571388 208 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 RN7SL199P-201ENST00000578752 281 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 RN7SL656P-201ENST00000579044 281 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 RN7SL404P-201ENST00000582421 281 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AC063977.7-201ENST00000594454 337 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLIP2Q9UDT6 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.16
CLIP2Q9UDT6 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.77□□□□□ -1.16
CLIP2Q9UDT6 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
CLIP2Q9UDT6 AC022034.1-201ENST00000512867 2156 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 RNA5SP333-201ENST00000363466 118 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 RNA5SP334-201ENST00000364825 118 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 RN7SKP129-201ENST00000410288 299 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 MRPS21P5-201ENST00000417885 231 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 AC245452.2-201ENST00000435222 392 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 ARMC4P1-201ENST00000438905 707 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 TDGP1-201ENST00000543961 1229 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 AL049840.5-201ENST00000602827 552 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 AC011891.2-201ENST00000604949 397 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 AC005828.7-201ENST00000607331 556 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 AC012676.3-201ENST00000614983 479 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 SNX18P10-201ENST00000625014 519 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 AC078880.4-201ENST00000617627 1749 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 OLMALINC-203ENST00000641087 3779 ntBASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLIP2Q9UDT6 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms