RNA–Protein interactions for RNA: ENST00000543961.1

TDGP1-201, Transcript of thymine-DNA glycosylase pseudogene 1, humanhuman

BASIC

Gene TDGP1, Length 1,229 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDGP1-201ENST00000543961 AEBP2Q6ZN18 517 aaPredicted RBP27.45■■□□□ 1.98
TDGP1-201ENST00000543961 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
TDGP1-201ENST00000543961 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
TDGP1-201ENST00000543961 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
TDGP1-201ENST00000543961 FOXD1Q16676 465 aa21.69■■□□□ 1.06
TDGP1-201ENST00000543961 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
TDGP1-201ENST00000543961 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
TDGP1-201ENST00000543961 ADRA2BP18089 450 aa20.59■□□□□ 0.89
TDGP1-201ENST00000543961 PIAS4Q8N2W9 510 aaPredicted RBP20.38■□□□□ 0.85
TDGP1-201ENST00000543961 MSH5O43196 834 aa20.18■□□□□ 0.82
TDGP1-201ENST00000543961 SCAF1Q9H7N4 1312 aaKnown RBP18.99■□□□□ 0.63
TDGP1-201ENST00000543961 PPP4R3CPQ6ZMV5 832 aa18.92■□□□□ 0.62
TDGP1-201ENST00000543961 MAPK8IP2Q13387 824 aaPredicted RBP18.72■□□□□ 0.59
TDGP1-201ENST00000543961 POTEDQ86YR6 584 aa18.68■□□□□ 0.58
TDGP1-201ENST00000543961 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
TDGP1-201ENST00000543961 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
TDGP1-201ENST00000543961 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
TDGP1-201ENST00000543961 HOXD11P31277 338 aaPredicted RBP18.21■□□□□ 0.51
TDGP1-201ENST00000543961 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
TDGP1-201ENST00000543961 KCNA4P22459 653 aa18.19■□□□□ 0.5
TDGP1-201ENST00000543961 NPM3O75607 178 aaKnown RBP18.1■□□□□ 0.49
TDGP1-201ENST00000543961 DNAJC5BQ9UF47 199 aa17.84■□□□□ 0.45
TDGP1-201ENST00000543961 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
TDGP1-201ENST00000543961 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
TDGP1-201ENST00000543961 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
TDGP1-201ENST00000543961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.23■□□□□ 0.35
TDGP1-201ENST00000543961 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
TDGP1-201ENST00000543961 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
TDGP1-201ENST00000543961 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
TDGP1-201ENST00000543961 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
TDGP1-201ENST00000543961 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
TDGP1-201ENST00000543961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
TDGP1-201ENST00000543961 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
TDGP1-201ENST00000543961 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
TDGP1-201ENST00000543961 ZBTB22O15209 634 aa16.73■□□□□ 0.27
TDGP1-201ENST00000543961 SAMD1Q6SPF0 538 aaPredicted RBP16.68■□□□□ 0.26
TDGP1-201ENST00000543961 APLP2Q06481 763 aa16.67■□□□□ 0.26
TDGP1-201ENST00000543961 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
TDGP1-201ENST00000543961 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
TDGP1-201ENST00000543961 CAPN15O75808 1086 aa16.45■□□□□ 0.22
TDGP1-201ENST00000543961 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
TDGP1-201ENST00000543961 ZNF219Q9P2Y4 722 aaPredicted RBP16.43■□□□□ 0.22
TDGP1-201ENST00000543961 ATXN8OSP0DMR3 200 aa16.39■□□□□ 0.21
TDGP1-201ENST00000543961 DSG3P32926 999 aa16.3■□□□□ 0.2
TDGP1-201ENST00000543961 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
TDGP1-201ENST00000543961 ATF5Q9Y2D1 282 aaPredicted RBP16.23■□□□□ 0.19
TDGP1-201ENST00000543961 NISCHQ9Y2I1 1504 aa16.23■□□□□ 0.19
TDGP1-201ENST00000543961 ABCB7O75027 752 aa16.07■□□□□ 0.16
TDGP1-201ENST00000543961 POLA2Q14181 598 aa16.02■□□□□ 0.16
TDGP1-201ENST00000543961 ZBTB12Q9Y330 459 aaPredicted RBP15.88■□□□□ 0.13
TDGP1-201ENST00000543961 FBLN2P98095 1184 aa15.65■□□□□ 0.1
TDGP1-201ENST00000543961 RBM42Q9BTD8 480 aaKnown RBP15.61■□□□□ 0.09
TDGP1-201ENST00000543961 MKRN4PQ13434 485 aaPredicted RBP15.57■□□□□ 0.08
TDGP1-201ENST00000543961 OSCARQ8IYS5 282 aa15.49■□□□□ 0.07
TDGP1-201ENST00000543961 SPDYE2BA6NHP3 402 aa15.4■□□□□ 0.06
TDGP1-201ENST00000543961 SPDYE6P0CI01 402 aa15.4■□□□□ 0.06
TDGP1-201ENST00000543961 SPDYE2Q495Y8 402 aa15.4■□□□□ 0.06
TDGP1-201ENST00000543961 AKT1S1Q96B36 256 aa15.34■□□□□ 0.05
TDGP1-201ENST00000543961 SSUH2Q9Y2M2 353 aa15.26■□□□□ 0.03
TDGP1-201ENST00000543961 ZNF692Q9BU19 519 aaPredicted RBP15.21■□□□□ 0.03
TDGP1-201ENST00000543961 REM2Q8IYK8 340 aaPredicted RBP15.14■□□□□ 0.01
TDGP1-201ENST00000543961 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
TDGP1-201ENST00000543961 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
TDGP1-201ENST00000543961 SPDYE1Q8NFV5 336 aaPredicted RBP14.98□□□□□ -0.01
TDGP1-201ENST00000543961 CHRDL2Q6WN34 429 aa14.97□□□□□ -0.01
TDGP1-201ENST00000543961 PITPNM1O00562 1244 aa14.96□□□□□ -0.01
TDGP1-201ENST00000543961 PROM2Q8N271 834 aa14.95□□□□□ -0.02
TDGP1-201ENST00000543961 FKBP8Q14318 412 aa14.86□□□□□ -0.03
TDGP1-201ENST00000543961 STAG3Q9UJ98 1225 aa14.81□□□□□ -0.04
TDGP1-201ENST00000543961 CLEC11AQ9Y240 323 aa14.79□□□□□ -0.04
TDGP1-201ENST00000543961 FXR2P51116 673 aaKnown RBP eCLIP14.78□□□□□ -0.04
TDGP1-201ENST00000543961 POTEHQ6S545 545 aa14.75□□□□□ -0.05
TDGP1-201ENST00000543961 PIP4P2Q8N4L2 257 aa14.72□□□□□ -0.05
TDGP1-201ENST00000543961 PRR29P0C7W0 189 aa14.69□□□□□ -0.06
TDGP1-201ENST00000543961 PRKAR2AP13861 404 aaKnown RBP14.56□□□□□ -0.08
TDGP1-201ENST00000543961 CCDC180Q9P1Z9 1646 aa14.55□□□□□ -0.08
TDGP1-201ENST00000543961 FBXO3Q9UK99 471 aa14.52□□□□□ -0.09
TDGP1-201ENST00000543961 CREBZFQ9NS37 354 aa14.48□□□□□ -0.09
TDGP1-201ENST00000543961 ABCC9O60706 1549 aa14.46□□□□□ -0.1
TDGP1-201ENST00000543961 CHADLQ6NUI6 762 aa14.44□□□□□ -0.1
TDGP1-201ENST00000543961 FARP1Q9Y4F1 1045 aaPredicted RBP14.39□□□□□ -0.11
TDGP1-201ENST00000543961 MNX1P50219 401 aaPredicted RBP14.34□□□□□ -0.11
TDGP1-201ENST00000543961 PLEKHG5O94827 1062 aa14.33□□□□□ -0.12
TDGP1-201ENST00000543961 MIER1Q8N108 512 aa14.3□□□□□ -0.12
TDGP1-201ENST00000543961 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
TDGP1-201ENST00000543961 VASPP50552 380 aaPredicted RBP14.27□□□□□ -0.13
TDGP1-201ENST00000543961 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
TDGP1-201ENST00000543961 PLCD3Q8N3E9 789 aa14.26□□□□□ -0.13
TDGP1-201ENST00000543961 HAX1O00165 279 aa14.25□□□□□ -0.13
TDGP1-201ENST00000543961 ZBTB47Q9UFB7 747 aaPredicted RBP14.25□□□□□ -0.13
TDGP1-201ENST00000543961 CD44P16070 742 aaKnown RBP14.14□□□□□ -0.15
TDGP1-201ENST00000543961 EVX2Q03828 476 aa14.1□□□□□ -0.15
TDGP1-201ENST00000543961 SP7Q8TDD2 431 aaPredicted RBP14.1□□□□□ -0.15
TDGP1-201ENST00000543961 PAK3O75914 559 aaPredicted RBP14.06□□□□□ -0.16
TDGP1-201ENST00000543961 CLCN6P51797 869 aa14.03□□□□□ -0.16
TDGP1-201ENST00000543961 NUBP1P53384 320 aa14.03□□□□□ -0.16
TDGP1-201ENST00000543961 IFNLR1Q8IU57 520 aaPredicted RBP14.03□□□□□ -0.16
TDGP1-201ENST00000543961 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
TDGP1-201ENST00000543961 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
TDGP1-201ENST00000543961 KLHL34Q8N239 644 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms