RNA–Protein interactions for RNA: ENST00000636380.1

CACNB4-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 1,756 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-223	ENST00000636380	AEBP2	Q6ZN18	517 aa	Predicted RBP	15.41	■□□□□ 0.06
CACNB4-223	ENST00000636380	NISCH	Q9Y2I1	1504 aa		15.12	■□□□□ 0.01
CACNB4-223	ENST00000636380	CHIC1	Q5VXU3	224 aa		14.75	□□□□□ -0.05
CACNB4-223	ENST00000636380	POTED	Q86YR6	584 aa		13.49	□□□□□ -0.25
CACNB4-223	ENST00000636380	SENP3	Q9H4L4	574 aa	Predicted RBP	13.3	□□□□□ -0.28
CACNB4-223	ENST00000636380	CCDC180	Q9P1Z9	1646 aa		13.11	□□□□□ -0.31
CACNB4-223	ENST00000636380	PHF23	Q9BUL5	403 aa	Predicted RBP	13.02	□□□□□ -0.33
CACNB4-223	ENST00000636380	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.66	□□□□□ -0.38
CACNB4-223	ENST00000636380	DCAF8L2	P0C7V8	631 aa		12.65	□□□□□ -0.38
CACNB4-223	ENST00000636380	ABCC9	O60706	1549 aa		12.56	□□□□□ -0.4
CACNB4-223	ENST00000636380	FOXD1	Q16676	465 aa		12.52	□□□□□ -0.41
CACNB4-223	ENST00000636380	DCAF1	Q9Y4B6	1507 aa		12.47	□□□□□ -0.41
CACNB4-223	ENST00000636380	SHROOM4	Q9ULL8	1493 aa		12.38	□□□□□ -0.43
CACNB4-223	ENST00000636380	MYO15B	Q96JP2	1530 aa		12.34	□□□□□ -0.43
CACNB4-223	ENST00000636380	NACAD	O15069	1562 aa		12.29	□□□□□ -0.44
CACNB4-223	ENST00000636380	DNAJC5B	Q9UF47	199 aa		12.25	□□□□□ -0.45
CACNB4-223	ENST00000636380	RB1CC1	Q8TDY2	1594 aa		12.19	□□□□□ -0.46
CACNB4-223	ENST00000636380	SCRIB	Q14160	1630 aa		12.11	□□□□□ -0.47
CACNB4-223	ENST00000636380	MSH5	O43196	834 aa		12.1	□□□□□ -0.47
CACNB4-223	ENST00000636380	SUPT5H	O00267	1087 aa	Known RBP	11.95	□□□□□ -0.5
CACNB4-223	ENST00000636380	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.9	□□□□□ -0.51
CACNB4-223	ENST00000636380	PLPPR3	Q6T4P5	718 aa		11.89	□□□□□ -0.51
CACNB4-223	ENST00000636380	UNC13A	Q9UPW8	1703 aa		11.83	□□□□□ -0.51
CACNB4-223	ENST00000636380	BICRA	Q9NZM4	1560 aa		11.8	□□□□□ -0.52
CACNB4-223	ENST00000636380	CECR2	Q9BXF3	1484 aa		11.77	□□□□□ -0.52
CACNB4-223	ENST00000636380	RSF1	Q96T23	1441 aa	Predicted RBP	11.75	□□□□□ -0.53
CACNB4-223	ENST00000636380	MROH2B	Q7Z745	1585 aa		11.68	□□□□□ -0.54
CACNB4-223	ENST00000636380	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.66	□□□□□ -0.54
CACNB4-223	ENST00000636380	DNAJC5	Q9H3Z4	198 aa		11.6	□□□□□ -0.55
CACNB4-223	ENST00000636380	SMARCA4	P51532	1647 aa		11.59	□□□□□ -0.55
CACNB4-223	ENST00000636380	ADRA2B	P18089	450 aa		11.56	□□□□□ -0.56
CACNB4-223	ENST00000636380	PPP6R1	Q9UPN7	881 aa		11.55	□□□□□ -0.56
CACNB4-223	ENST00000636380	WIZ	O95785	1651 aa		11.55	□□□□□ -0.56
CACNB4-223	ENST00000636380	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.53	□□□□□ -0.56
CACNB4-223	ENST00000636380	ATAD2B	Q9ULI0	1458 aa		11.46	□□□□□ -0.57
CACNB4-223	ENST00000636380	EIF4G1	Q04637	1599 aa	Known RBP	11.46	□□□□□ -0.57
CACNB4-223	ENST00000636380	TOP2A	P11388	1531 aa	Known RBP	11.44	□□□□□ -0.58
CACNB4-223	ENST00000636380	SMARCA2	P51531	1590 aa		11.44	□□□□□ -0.58
CACNB4-223	ENST00000636380	PEG3	Q9GZU2	1588 aa		11.44	□□□□□ -0.58
CACNB4-223	ENST00000636380	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.39	□□□□□ -0.59
CACNB4-223	ENST00000636380	NCAPD3	P42695	1498 aa		11.38	□□□□□ -0.59
CACNB4-223	ENST00000636380	CCDC88B	A6NC98	1476 aa		11.37	□□□□□ -0.59
CACNB4-223	ENST00000636380	CC2D2A	Q9P2K1	1620 aa		11.35	□□□□□ -0.59
CACNB4-223	ENST00000636380	HMGXB3	Q12766	1538 aa		11.3	□□□□□ -0.6
CACNB4-223	ENST00000636380	TRIM41	Q8WV44	630 aa		11.23	□□□□□ -0.61
CACNB4-223	ENST00000636380	CADPS	Q9ULU8	1353 aa		11.11	□□□□□ -0.63
CACNB4-223	ENST00000636380	CFTR	P13569	1480 aa		11.11	□□□□□ -0.63
CACNB4-223	ENST00000636380	ABCC8	Q09428	1581 aa		11.08	□□□□□ -0.64
CACNB4-223	ENST00000636380	CUX2	O14529	1486 aa		11.06	□□□□□ -0.64
CACNB4-223	ENST00000636380	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.05	□□□□□ -0.64
CACNB4-223	ENST00000636380	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.03	□□□□□ -0.64
CACNB4-223	ENST00000636380	CACNB1	Q02641	598 aa	Predicted RBP	11.02	□□□□□ -0.65
CACNB4-223	ENST00000636380	NES	P48681	1621 aa		10.99	□□□□□ -0.65
CACNB4-223	ENST00000636380	LOC105371045	A0A1W2PR82	267 aa		10.98	□□□□□ -0.65
CACNB4-223	ENST00000636380	FANCD2	Q9BXW9	1451 aa		10.96	□□□□□ -0.66
CACNB4-223	ENST00000636380	LAMC3	Q9Y6N6	1575 aa		10.95	□□□□□ -0.66
CACNB4-223	ENST00000636380	SYNJ1	O43426	1573 aa		10.94	□□□□□ -0.66
CACNB4-223	ENST00000636380	PDS5B	Q9NTI5	1447 aa		10.94	□□□□□ -0.66
CACNB4-223	ENST00000636380	CUX1	P39880	1505 aa		10.92	□□□□□ -0.66
CACNB4-223	ENST00000636380	SOGA1	O94964	1423 aa		10.91	□□□□□ -0.66
CACNB4-223	ENST00000636380	TOP2B	Q02880	1626 aa		10.91	□□□□□ -0.66
CACNB4-223	ENST00000636380	PRDM2	Q13029	1718 aa		10.91	□□□□□ -0.66
CACNB4-223	ENST00000636380	CSRNP3	Q8WYN3	585 aa		10.9	□□□□□ -0.66
CACNB4-223	ENST00000636380	CEP164	Q9UPV0	1460 aa		10.88	□□□□□ -0.67
CACNB4-223	ENST00000636380	EHMT2	Q96KQ7	1210 aa		10.88	□□□□□ -0.67
CACNB4-223	ENST00000636380	EEA1	Q15075	1411 aa		10.88	□□□□□ -0.67
CACNB4-223	ENST00000636380	ERCC6	Q03468	1493 aa		10.87	□□□□□ -0.67
CACNB4-223	ENST00000636380	BIVM-ERCC5	R4GMW8	1640 aa		10.87	□□□□□ -0.67
CACNB4-223	ENST00000636380	RUSC2	Q8N2Y8	1516 aa		10.86	□□□□□ -0.67
CACNB4-223	ENST00000636380	TOPBP1	Q92547	1522 aa		10.82	□□□□□ -0.68
CACNB4-223	ENST00000636380	FGD5	Q6ZNL6	1462 aa		10.82	□□□□□ -0.68
CACNB4-223	ENST00000636380	DNMBP	Q6XZF7	1577 aa		10.82	□□□□□ -0.68
CACNB4-223	ENST00000636380	URB2	Q14146	1524 aa	Known RBP	10.81	□□□□□ -0.68
CACNB4-223	ENST00000636380	KIF27	Q86VH2	1401 aa		10.8	□□□□□ -0.68
CACNB4-223	ENST00000636380	UBTF	P17480	764 aa	Known RBP	10.77	□□□□□ -0.68
CACNB4-223	ENST00000636380	KIF21A	Q7Z4S6	1674 aa		10.77	□□□□□ -0.69
CACNB4-223	ENST00000636380	MRC2	Q9UBG0	1479 aa		10.77	□□□□□ -0.69
CACNB4-223	ENST00000636380	POLA1	P09884	1462 aa	Predicted RBP	10.76	□□□□□ -0.69
CACNB4-223	ENST00000636380	RAD54L2	Q9Y4B4	1467 aa		10.75	□□□□□ -0.69
CACNB4-223	ENST00000636380	IGF1R	P08069	1367 aa		10.72	□□□□□ -0.69
CACNB4-223	ENST00000636380	GOLGA3	Q08378	1498 aa		10.72	□□□□□ -0.69
CACNB4-223	ENST00000636380	TNIK	Q9UKE5	1360 aa		10.72	□□□□□ -0.69
CACNB4-223	ENST00000636380	ABCA10	Q8WWZ4	1543 aa		10.71	□□□□□ -0.69
CACNB4-223	ENST00000636380	TDRD9	Q8NDG6	1382 aa	Known RBP	10.7	□□□□□ -0.7
CACNB4-223	ENST00000636380	PRX	Q9BXM0	1461 aa		10.69	□□□□□ -0.7
CACNB4-223	ENST00000636380	KIF21B	O75037	1637 aa		10.67	□□□□□ -0.7
CACNB4-223	ENST00000636380	RAPGEF2	Q9Y4G8	1499 aa		10.67	□□□□□ -0.7
CACNB4-223	ENST00000636380	WDR62	O43379	1518 aa		10.67	□□□□□ -0.7
CACNB4-223	ENST00000636380	CARMIL1	Q5VZK9	1371 aa		10.67	□□□□□ -0.7
CACNB4-223	ENST00000636380	THOC2	Q8NI27	1593 aa	Known RBP	10.66	□□□□□ -0.7
CACNB4-223	ENST00000636380	IFT140	Q96RY7	1462 aa		10.64	□□□□□ -0.71
CACNB4-223	ENST00000636380	GAPVD1	Q14C86	1478 aa		10.64	□□□□□ -0.71
CACNB4-223	ENST00000636380	TARBP1	Q13395	1621 aa	Known RBP	10.62	□□□□□ -0.71
CACNB4-223	ENST00000636380	ERICH3	Q5RHP9	1530 aa		10.62	□□□□□ -0.71
CACNB4-223	ENST00000636380	CEP162	Q5TB80	1403 aa		10.62	□□□□□ -0.71
CACNB4-223	ENST00000636380	AQR	O60306	1485 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
CACNB4-223	ENST00000636380	RANGAP1	P46060	587 aa	Predicted RBP	10.61	□□□□□ -0.71
CACNB4-223	ENST00000636380	WDR97	A6NE52	1622 aa		10.58	□□□□□ -0.72
CACNB4-223	ENST00000636380	SCAF1	Q9H7N4	1312 aa	Known RBP	10.58	□□□□□ -0.72
CACNB4-223	ENST00000636380	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.57	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms