RNA–Protein interactions for RNA: ENST00000410288.1

RN7SKP129-201, Transcript of RNA, 7SK small nuclear pseudogene 129, humanhuman

BASIC

Gene RN7SKP129, Length 299 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP129-201ENST00000410288 AEBP2Q6ZN18 517 aaPredicted RBP18.96■□□□□ 0.63
RN7SKP129-201ENST00000410288 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
RN7SKP129-201ENST00000410288 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
RN7SKP129-201ENST00000410288 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
RN7SKP129-201ENST00000410288 SENP3Q9H4L4 574 aaPredicted RBP16.05■□□□□ 0.16
RN7SKP129-201ENST00000410288 PLPPR3Q6T4P5 718 aa15.26■□□□□ 0.03
RN7SKP129-201ENST00000410288 FOXD1Q16676 465 aa14.89□□□□□ -0.03
RN7SKP129-201ENST00000410288 CCDC180Q9P1Z9 1646 aa14.56□□□□□ -0.08
RN7SKP129-201ENST00000410288 ADRA2BP18089 450 aa14.49□□□□□ -0.09
RN7SKP129-201ENST00000410288 PPP6R1Q9UPN7 881 aa14.46□□□□□ -0.09
RN7SKP129-201ENST00000410288 ABCC9O60706 1549 aa14.44□□□□□ -0.1
RN7SKP129-201ENST00000410288 PIAS4Q8N2W9 510 aaPredicted RBP14.11□□□□□ -0.15
RN7SKP129-201ENST00000410288 RB1CC1Q8TDY2 1594 aa13.79□□□□□ -0.2
RN7SKP129-201ENST00000410288 NACADO15069 1562 aa13.71□□□□□ -0.22
RN7SKP129-201ENST00000410288 MSH5O43196 834 aa13.64□□□□□ -0.23
RN7SKP129-201ENST00000410288 DCAF8L2P0C7V8 631 aa13.63□□□□□ -0.23
RN7SKP129-201ENST00000410288 MYO15BQ96JP2 1530 aa13.53□□□□□ -0.24
RN7SKP129-201ENST00000410288 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
RN7SKP129-201ENST00000410288 ZCCHC6Q5VYS8 1495 aaKnown RBP13.49□□□□□ -0.25
RN7SKP129-201ENST00000410288 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
RN7SKP129-201ENST00000410288 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.26
RN7SKP129-201ENST00000410288 DCAF1Q9Y4B6 1507 aa13.41□□□□□ -0.26
RN7SKP129-201ENST00000410288 KCNA4P22459 653 aa13.4□□□□□ -0.26
RN7SKP129-201ENST00000410288 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
RN7SKP129-201ENST00000410288 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
RN7SKP129-201ENST00000410288 SCRIBQ14160 1630 aa13.29□□□□□ -0.28
RN7SKP129-201ENST00000410288 SCAF1Q9H7N4 1312 aaKnown RBP13.22□□□□□ -0.29
RN7SKP129-201ENST00000410288 SHROOM4Q9ULL8 1493 aa13.2□□□□□ -0.3
RN7SKP129-201ENST00000410288 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
RN7SKP129-201ENST00000410288 MAPK8IP2Q13387 824 aaPredicted RBP13.09□□□□□ -0.31
RN7SKP129-201ENST00000410288 EIF4G1Q04637 1599 aaKnown RBP13.06□□□□□ -0.32
RN7SKP129-201ENST00000410288 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
RN7SKP129-201ENST00000410288 CNKSR2Q8WXI2 1034 aa13.05□□□□□ -0.32
RN7SKP129-201ENST00000410288 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
RN7SKP129-201ENST00000410288 CECR2Q9BXF3 1484 aa12.98□□□□□ -0.33
RN7SKP129-201ENST00000410288 DMRT2Q9Y5R5 561 aa12.84□□□□□ -0.35
RN7SKP129-201ENST00000410288 SLC4A1APQ9BWU0 796 aaKnown RBP12.79□□□□□ -0.36
RN7SKP129-201ENST00000410288 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
RN7SKP129-201ENST00000410288 EHMT2Q96KQ7 1210 aa12.69□□□□□ -0.38
RN7SKP129-201ENST00000410288 SMARCA4P51532 1647 aa12.67□□□□□ -0.38
RN7SKP129-201ENST00000410288 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
RN7SKP129-201ENST00000410288 NCAPD3P42695 1498 aa12.62□□□□□ -0.39
RN7SKP129-201ENST00000410288 ATAD2BQ9ULI0 1458 aa12.62□□□□□ -0.39
RN7SKP129-201ENST00000410288 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
RN7SKP129-201ENST00000410288 BAZ1AQ9NRL2 1556 aaPredicted RBP12.6□□□□□ -0.39
RN7SKP129-201ENST00000410288 HMGXB3Q12766 1538 aa12.58□□□□□ -0.4
RN7SKP129-201ENST00000410288 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
RN7SKP129-201ENST00000410288 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.4
RN7SKP129-201ENST00000410288 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.41
RN7SKP129-201ENST00000410288 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
RN7SKP129-201ENST00000410288 NESP48681 1621 aa12.44□□□□□ -0.42
RN7SKP129-201ENST00000410288 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
RN7SKP129-201ENST00000410288 WIZO95785 1651 aa12.4□□□□□ -0.42
RN7SKP129-201ENST00000410288 CUX2O14529 1486 aa12.39□□□□□ -0.43
RN7SKP129-201ENST00000410288 LAMC3Q9Y6N6 1575 aa12.36□□□□□ -0.43
RN7SKP129-201ENST00000410288 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
RN7SKP129-201ENST00000410288 ZBTB22O15209 634 aa12.32□□□□□ -0.44
RN7SKP129-201ENST00000410288 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
RN7SKP129-201ENST00000410288 THOC2Q8NI27 1593 aaKnown RBP12.3□□□□□ -0.44
RN7SKP129-201ENST00000410288 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
RN7SKP129-201ENST00000410288 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
RN7SKP129-201ENST00000410288 PDS5BQ9NTI5 1447 aa12.27□□□□□ -0.45
RN7SKP129-201ENST00000410288 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
RN7SKP129-201ENST00000410288 TOP2AP11388 1531 aaKnown RBP12.24□□□□□ -0.45
RN7SKP129-201ENST00000410288 SLC4A2P04920 1241 aa12.21□□□□□ -0.45
RN7SKP129-201ENST00000410288 DNAJC5Q9H3Z4 198 aa12.21□□□□□ -0.45
RN7SKP129-201ENST00000410288 MRC2Q9UBG0 1479 aa12.18□□□□□ -0.46
RN7SKP129-201ENST00000410288 CEP164Q9UPV0 1460 aa12.15□□□□□ -0.46
RN7SKP129-201ENST00000410288 WDR62O43379 1518 aa12.15□□□□□ -0.46
RN7SKP129-201ENST00000410288 CFTRP13569 1480 aa12.14□□□□□ -0.47
RN7SKP129-201ENST00000410288 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
RN7SKP129-201ENST00000410288 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
RN7SKP129-201ENST00000410288 PRDM2Q13029 1718 aa12.11□□□□□ -0.47
RN7SKP129-201ENST00000410288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.09□□□□□ -0.47
RN7SKP129-201ENST00000410288 CCDC88BA6NC98 1476 aa12.07□□□□□ -0.48
RN7SKP129-201ENST00000410288 URB2Q14146 1524 aaKnown RBP12.04□□□□□ -0.48
RN7SKP129-201ENST00000410288 MYCNP04198 464 aaPredicted RBP12.01□□□□□ -0.49
RN7SKP129-201ENST00000410288 TOPBP1Q92547 1522 aa11.92□□□□□ -0.5
RN7SKP129-201ENST00000410288 DNMBPQ6XZF7 1577 aa11.91□□□□□ -0.5
RN7SKP129-201ENST00000410288 U3KPZ7 1027 aaPredicted RBP11.9□□□□□ -0.5
RN7SKP129-201ENST00000410288 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
RN7SKP129-201ENST00000410288 ABCC8Q09428 1581 aa11.88□□□□□ -0.51
RN7SKP129-201ENST00000410288 ZNF608Q9ULD9 1512 aaPredicted RBP11.87□□□□□ -0.51
RN7SKP129-201ENST00000410288 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
RN7SKP129-201ENST00000410288 TARBP1Q13395 1621 aaKnown RBP11.82□□□□□ -0.52
RN7SKP129-201ENST00000410288 SUPT5HO00267 1087 aaKnown RBP11.81□□□□□ -0.52
RN7SKP129-201ENST00000410288 POLA1P09884 1462 aaPredicted RBP11.81□□□□□ -0.52
RN7SKP129-201ENST00000410288 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
RN7SKP129-201ENST00000410288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.79□□□□□ -0.52
RN7SKP129-201ENST00000410288 HNRNPUL2Q1KMD3 747 aaKnown RBP11.79□□□□□ -0.52
RN7SKP129-201ENST00000410288 CUX1P39880 1505 aa11.77□□□□□ -0.52
RN7SKP129-201ENST00000410288 ATXN8OSP0DMR3 200 aa11.77□□□□□ -0.53
RN7SKP129-201ENST00000410288 TRIM41Q8WV44 630 aa11.77□□□□□ -0.53
RN7SKP129-201ENST00000410288 RAD54L2Q9Y4B4 1467 aa11.76□□□□□ -0.53
RN7SKP129-201ENST00000410288 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP129-201ENST00000410288 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.53
RN7SKP129-201ENST00000410288 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
RN7SKP129-201ENST00000410288 CHD1O14646 1710 aa11.75□□□□□ -0.53
RN7SKP129-201ENST00000410288 SOGA1O94964 1423 aa11.73□□□□□ -0.53
RN7SKP129-201ENST00000410288 WDR97A6NE52 1622 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms