RNA–Protein interactions for RNA: ENST00000621791.4

CACNA1E-210, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1E, Length 16,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-210ENST00000621791 DCAF8L2P0C7V8 631 aa10.87□□□□□ -0.67
CACNA1E-210ENST00000621791 PELP1Q8IZL8 1130 aaKnown RBP10.77□□□□□ -0.69
CACNA1E-210ENST00000621791 SUPT5HO00267 1087 aaKnown RBP10.6□□□□□ -0.71
CACNA1E-210ENST00000621791 MYT1Q01538 1121 aa10.6□□□□□ -0.71
CACNA1E-210ENST00000621791 PCGF6Q9BYE7 350 aa10.58□□□□□ -0.72
CACNA1E-210ENST00000621791 HRCP23327 699 aa10.29□□□□□ -0.76
CACNA1E-210ENST00000621791 ZEB1P37275 1124 aaPredicted RBP10.27□□□□□ -0.77
CACNA1E-210ENST00000621791 CENPBP07199 599 aaPredicted RBP10.26□□□□□ -0.77
CACNA1E-210ENST00000621791 EHMT2Q96KQ7 1210 aa10.26□□□□□ -0.77
CACNA1E-210ENST00000621791 PPARGC1BQ86YN6 1023 aaKnown RBP10.13□□□□□ -0.79
CACNA1E-210ENST00000621791 ERICH6Q7L0X2 663 aa10.1□□□□□ -0.79
CACNA1E-210ENST00000621791 SHROOM4Q9ULL8 1493 aa10.07□□□□□ -0.8
CACNA1E-210ENST00000621791 CCER1Q8TC90 406 aaPredicted RBP10.06□□□□□ -0.8
CACNA1E-210ENST00000621791 YTHDC1Q96MU7 727 aaKnown RBP10.03□□□□□ -0.8
CACNA1E-210ENST00000621791 FAM9AQ8IZU1 332 aaPredicted RBP10.02□□□□□ -0.81
CACNA1E-210ENST00000621791 TRIM26Q12899 539 aaPredicted RBP9.95□□□□□ -0.82
CACNA1E-210ENST00000621791 TTBK1Q5TCY1 1321 aaPredicted RBP9.92□□□□□ -0.82
CACNA1E-210ENST00000621791 APLP2Q06481 763 aa9.92□□□□□ -0.82
CACNA1E-210ENST00000621791 LOC105371045A0A1W2PR82 267 aa9.9□□□□□ -0.82
CACNA1E-210ENST00000621791 NEFLP07196 543 aa9.81□□□□□ -0.84
CACNA1E-210ENST00000621791 GTF3C3Q9Y5Q9 886 aa9.81□□□□□ -0.84
CACNA1E-210ENST00000621791 DIEXFQ68CQ4 756 aaKnown RBP9.75□□□□□ -0.85
CACNA1E-210ENST00000621791 TRIM41Q8WV44 630 aa9.74□□□□□ -0.85
CACNA1E-210ENST00000621791 CHIC1Q5VXU3 224 aa9.71□□□□□ -0.86
CACNA1E-210ENST00000621791 ACIN1Q9UKV3 1341 aaKnown RBP9.71□□□□□ -0.86
CACNA1E-210ENST00000621791 DAXXQ9UER7 740 aaPredicted RBP9.63□□□□□ -0.87
CACNA1E-210ENST00000621791 RANGAP1P46060 587 aaPredicted RBP9.63□□□□□ -0.87
CACNA1E-210ENST00000621791 SCAF1Q9H7N4 1312 aaKnown RBP9.62□□□□□ -0.87
CACNA1E-210ENST00000621791 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.61□□□□□ -0.87
CACNA1E-210ENST00000621791 UBTFP17480 764 aaKnown RBP9.59□□□□□ -0.87
CACNA1E-210ENST00000621791 ATP1B4Q9UN42 357 aaPredicted RBP9.54□□□□□ -0.88
CACNA1E-210ENST00000621791 BCANQ96GW7 911 aa9.53□□□□□ -0.88
CACNA1E-210ENST00000621791 NEUROD1Q13562 356 aa9.52□□□□□ -0.89
CACNA1E-210ENST00000621791 HNRNPUL2Q1KMD3 747 aaKnown RBP9.48□□□□□ -0.89
CACNA1E-210ENST00000621791 RTL5Q5HYW3 569 aaPredicted RBP9.46□□□□□ -0.89
CACNA1E-210ENST00000621791 CDK11AQ9UQ88 783 aaPredicted RBP9.45□□□□□ -0.9
CACNA1E-210ENST00000621791 ZNF316A6NFI3 1004 aaPredicted RBP9.44□□□□□ -0.9
CACNA1E-210ENST00000621791 NISCHQ9Y2I1 1504 aa9.37□□□□□ -0.91
CACNA1E-210ENST00000621791 ITGAEP38570 1179 aa9.34□□□□□ -0.91
CACNA1E-210ENST00000621791 EIF5BO60841 1220 aaKnown RBP9.32□□□□□ -0.92
CACNA1E-210ENST00000621791 MIER1Q8N108 512 aa9.3□□□□□ -0.92
CACNA1E-210ENST00000621791 ANP32EQ9BTT0 268 aa9.29□□□□□ -0.92
CACNA1E-210ENST00000621791 CNGB1Q14028 1251 aaPredicted RBP9.29□□□□□ -0.92
CACNA1E-210ENST00000621791 BCL11AQ9H165 835 aa9.27□□□□□ -0.93
CACNA1E-210ENST00000621791 POLR3GLQ9BT43 218 aa9.27□□□□□ -0.93
CACNA1E-210ENST00000621791 FKBP8Q14318 412 aa9.26□□□□□ -0.93
CACNA1E-210ENST00000621791 CLSPNQ9HAW4 1339 aa9.25□□□□□ -0.93
CACNA1E-210ENST00000621791 ANP32CO43423 234 aa9.25□□□□□ -0.93
CACNA1E-210ENST00000621791 MYT1LQ9UL68 1186 aa9.25□□□□□ -0.93
CACNA1E-210ENST00000621791 NBR1Q14596 966 aa9.21□□□□□ -0.94
CACNA1E-210ENST00000621791 ANP32AP39687 249 aaKnown RBP9.16□□□□□ -0.94
CACNA1E-210ENST00000621791 ZBTB47Q9UFB7 747 aaPredicted RBP9.11□□□□□ -0.95
CACNA1E-210ENST00000621791 NPM2Q86SE8 214 aaKnown RBP9.09□□□□□ -0.95
CACNA1E-210ENST00000621791 GLIPR1L2Q4G1C9 344 aa9.09□□□□□ -0.95
CACNA1E-210ENST00000621791 DDX10Q13206 875 aaKnown RBP9.08□□□□□ -0.96
CACNA1E-210ENST00000621791 SLC4A1APQ9BWU0 796 aaKnown RBP9.07□□□□□ -0.96
CACNA1E-210ENST00000621791 CSRNP3Q8WYN3 585 aa9.05□□□□□ -0.96
CACNA1E-210ENST00000621791 FAM50AQ14320 339 aaKnown RBP9.03□□□□□ -0.96
CACNA1E-210ENST00000621791 DEKP35659 375 aaKnown RBP9.02□□□□□ -0.96
CACNA1E-210ENST00000621791 SUPT16HQ9Y5B9 1047 aaKnown RBP9.02□□□□□ -0.97
CACNA1E-210ENST00000621791 TRIM52Q96A61 297 aa9.01□□□□□ -0.97
CACNA1E-210ENST00000621791 IRX6P78412 446 aaPredicted RBP9□□□□□ -0.97
CACNA1E-210ENST00000621791 RBM19Q9Y4C8 960 aaKnown RBP9□□□□□ -0.97
CACNA1E-210ENST00000621791 ANP32BQ92688 251 aaKnown RBP8.98□□□□□ -0.97
CACNA1E-210ENST00000621791 TSHZ2Q9NRE2 1034 aa8.97□□□□□ -0.97
CACNA1E-210ENST00000621791 HNRNPUQ00839 825 aaKnown RBP eCLIP8.97□□□□□ -0.97
CACNA1E-210ENST00000621791 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.97
CACNA1E-210ENST00000621791 CCDC136Q96JN2 1154 aa8.96□□□□□ -0.98
CACNA1E-210ENST00000621791 FAM9BQ8IZU0 186 aa8.91□□□□□ -0.98
CACNA1E-210ENST00000621791 NOP58Q9Y2X3 529 aaKnown RBP8.89□□□□□ -0.99
CACNA1E-210ENST00000621791 ERICH6BQ5W0A0 696 aa8.88□□□□□ -0.99
CACNA1E-210ENST00000621791 NEFMP07197 916 aa8.88□□□□□ -0.99
CACNA1E-210ENST00000621791 PPP4R2Q9NY27 417 aa8.87□□□□□ -0.99
CACNA1E-210ENST00000621791 LAS1LQ9Y4W2 734 aaKnown RBP8.86□□□□□ -0.99
CACNA1E-210ENST00000621791 HIRIP3Q9BW71 556 aaPredicted RBP8.86□□□□□ -0.99
CACNA1E-210ENST00000621791 ARXQ96QS3 562 aa8.85□□□□□ -0.99
CACNA1E-210ENST00000621791 CANXP27824 592 aaKnown RBP8.85□□□□□ -0.99
CACNA1E-210ENST00000621791 ZNF326Q5BKZ1 582 aaKnown RBP8.85□□□□□ -0.99
CACNA1E-210ENST00000621791 SALL2Q9Y467 1007 aaPredicted RBP8.84□□□□□ -0.99
CACNA1E-210ENST00000621791 DDRGK1Q96HY6 314 aa8.82□□□□□ -1
CACNA1E-210ENST00000621791 HSP90AA1P07900 732 aaKnown RBP8.82□□□□□ -1
CACNA1E-210ENST00000621791 SLC24A1O60721 1099 aa8.82□□□□□ -1
CACNA1E-210ENST00000621791 B4GALNT3Q6L9W6 998 aa8.81□□□□□ -1
CACNA1E-210ENST00000621791 MRS2Q9HD23 443 aa8.81□□□□□ -1
CACNA1E-210ENST00000621791 PPM1GO15355 546 aaPredicted RBP8.8□□□□□ -1
CACNA1E-210ENST00000621791 TNNT2P45379 298 aaPredicted RBP8.8□□□□□ -1
CACNA1E-210ENST00000621791 TMC1Q8TDI8 760 aa8.8□□□□□ -1
CACNA1E-210ENST00000621791 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.79□□□□□ -1
CACNA1E-210ENST00000621791 NAP1L5Q96NT1 182 aaPredicted RBP8.79□□□□□ -1
CACNA1E-210ENST00000621791 UPF2Q9HAU5 1272 aaKnown RBP8.77□□□□□ -1.01
CACNA1E-210ENST00000621791 DCAF1Q9Y4B6 1507 aa8.75□□□□□ -1.01
CACNA1E-210ENST00000621791 BECN1Q14457 450 aa8.74□□□□□ -1.01
CACNA1E-210ENST00000621791 PABPN1Q86U42 306 aaKnown RBP eCLIP8.73□□□□□ -1.01
CACNA1E-210ENST00000621791 FBLN2P98095 1184 aa8.72□□□□□ -1.01
CACNA1E-210ENST00000621791 SENP3-EIF4A1A0A087X0R7 540 aa8.71□□□□□ -1.01
CACNA1E-210ENST00000621791 P3H3Q8IVL6 736 aa8.71□□□□□ -1.02
CACNA1E-210ENST00000621791 TRIM44Q96DX7 344 aaPredicted RBP8.7□□□□□ -1.02
CACNA1E-210ENST00000621791 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.69□□□□□ -1.02
CACNA1E-210ENST00000621791 ANO8Q9HCE9 1232 aaPredicted RBP8.69□□□□□ -1.02
CACNA1E-210ENST00000621791 IPO9Q96P70 1041 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms