RNA–Protein interactions for RNA: ENST00000438420.6

HPS5-205, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS5, Length 4,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-205ENST00000438420 NISCHQ9Y2I1 1504 aa13.94□□□□□ -0.18
HPS5-205ENST00000438420 CHIC1Q5VXU3 224 aa12.83□□□□□ -0.36
HPS5-205ENST00000438420 AEBP2Q6ZN18 517 aaPredicted RBP12.47□□□□□ -0.41
HPS5-205ENST00000438420 PHF23Q9BUL5 403 aaPredicted RBP12.04□□□□□ -0.48
HPS5-205ENST00000438420 DCAF8L2P0C7V8 631 aa12.01□□□□□ -0.49
HPS5-205ENST00000438420 SHROOM4Q9ULL8 1493 aa12□□□□□ -0.49
HPS5-205ENST00000438420 CCDC180Q9P1Z9 1646 aa11.87□□□□□ -0.51
HPS5-205ENST00000438420 SUPT5HO00267 1087 aaKnown RBP11.76□□□□□ -0.53
HPS5-205ENST00000438420 ZCCHC6Q5VYS8 1495 aaKnown RBP11.73□□□□□ -0.53
HPS5-205ENST00000438420 DCAF1Q9Y4B6 1507 aa11.37□□□□□ -0.59
HPS5-205ENST00000438420 ABCC9O60706 1549 aa11.34□□□□□ -0.59
HPS5-205ENST00000438420 SCRIBQ14160 1630 aa11.22□□□□□ -0.61
HPS5-205ENST00000438420 SLC24A1O60721 1099 aa11.17□□□□□ -0.62
HPS5-205ENST00000438420 DNAJC5BQ9UF47 199 aa11.11□□□□□ -0.63
HPS5-205ENST00000438420 MYO15BQ96JP2 1530 aa11.1□□□□□ -0.63
HPS5-205ENST00000438420 NACADO15069 1562 aa11.1□□□□□ -0.63
HPS5-205ENST00000438420 RB1CC1Q8TDY2 1594 aa10.99□□□□□ -0.65
HPS5-205ENST00000438420 RSF1Q96T23 1441 aaPredicted RBP10.99□□□□□ -0.65
HPS5-205ENST00000438420 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.65
HPS5-205ENST00000438420 TRIM41Q8WV44 630 aa10.95□□□□□ -0.66
HPS5-205ENST00000438420 FAM9AQ8IZU1 332 aaPredicted RBP10.9□□□□□ -0.66
HPS5-205ENST00000438420 CECR2Q9BXF3 1484 aa10.89□□□□□ -0.67
HPS5-205ENST00000438420 LOC105371045A0A1W2PR82 267 aa10.88□□□□□ -0.67
HPS5-205ENST00000438420 EHMT2Q96KQ7 1210 aa10.87□□□□□ -0.67
HPS5-205ENST00000438420 PABPN1Q86U42 306 aaKnown RBP eCLIP10.86□□□□□ -0.67
HPS5-205ENST00000438420 MROH2BQ7Z745 1585 aa10.82□□□□□ -0.68
HPS5-205ENST00000438420 PCGF6Q9BYE7 350 aa10.81□□□□□ -0.68
HPS5-205ENST00000438420 BAZ1AQ9NRL2 1556 aaPredicted RBP10.77□□□□□ -0.68
HPS5-205ENST00000438420 PLPPR3Q6T4P5 718 aa10.74□□□□□ -0.69
HPS5-205ENST00000438420 WIZO95785 1651 aa10.74□□□□□ -0.69
HPS5-205ENST00000438420 KCNA4P22459 653 aa10.7□□□□□ -0.7
HPS5-205ENST00000438420 SMARCA4P51532 1647 aa10.64□□□□□ -0.71
HPS5-205ENST00000438420 TOP2AP11388 1531 aaKnown RBP10.61□□□□□ -0.71
HPS5-205ENST00000438420 ZBTB22O15209 634 aa10.6□□□□□ -0.71
HPS5-205ENST00000438420 TRIM26Q12899 539 aaPredicted RBP10.6□□□□□ -0.71
HPS5-205ENST00000438420 HRCP23327 699 aa10.6□□□□□ -0.71
HPS5-205ENST00000438420 UNC13AQ9UPW8 1703 aa10.58□□□□□ -0.72
HPS5-205ENST00000438420 CCDC88BA6NC98 1476 aa10.57□□□□□ -0.72
HPS5-205ENST00000438420 UBTFP17480 764 aaKnown RBP10.53□□□□□ -0.72
HPS5-205ENST00000438420 BICRAQ9NZM4 1560 aa10.52□□□□□ -0.73
HPS5-205ENST00000438420 PPARGC1BQ86YN6 1023 aaKnown RBP10.51□□□□□ -0.73
HPS5-205ENST00000438420 BAZ1BQ9UIG0 1483 aaKnown RBP10.51□□□□□ -0.73
HPS5-205ENST00000438420 SMARCA2P51531 1590 aa10.5□□□□□ -0.73
HPS5-205ENST00000438420 ABCC8Q09428 1581 aa10.5□□□□□ -0.73
HPS5-205ENST00000438420 TTBK1Q5TCY1 1321 aaPredicted RBP10.48□□□□□ -0.73
HPS5-205ENST00000438420 ATAD2BQ9ULI0 1458 aa10.45□□□□□ -0.74
HPS5-205ENST00000438420 RTN4Q9NQC3 1192 aaKnown RBP10.44□□□□□ -0.74
HPS5-205ENST00000438420 WRNQ14191 1432 aaPredicted RBP eCLIP10.43□□□□□ -0.74
HPS5-205ENST00000438420 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
HPS5-205ENST00000438420 RANGAP1P46060 587 aaPredicted RBP10.41□□□□□ -0.74
HPS5-205ENST00000438420 SOGA1O94964 1423 aa10.39□□□□□ -0.75
HPS5-205ENST00000438420 EEA1Q15075 1411 aa10.38□□□□□ -0.75
HPS5-205ENST00000438420 ZEB1P37275 1124 aaPredicted RBP10.38□□□□□ -0.75
HPS5-205ENST00000438420 EIF4G1Q04637 1599 aaKnown RBP10.38□□□□□ -0.75
HPS5-205ENST00000438420 APLP2Q06481 763 aa10.37□□□□□ -0.75
HPS5-205ENST00000438420 PEG3Q9GZU2 1588 aa10.35□□□□□ -0.75
HPS5-205ENST00000438420 CEP162Q5TB80 1403 aa10.33□□□□□ -0.76
HPS5-205ENST00000438420 GOLGA3Q08378 1498 aa10.32□□□□□ -0.76
HPS5-205ENST00000438420 TNIKQ9UKE5 1360 aa10.3□□□□□ -0.76
HPS5-205ENST00000438420 CCER1Q8TC90 406 aaPredicted RBP10.3□□□□□ -0.76
HPS5-205ENST00000438420 RUSC2Q8N2Y8 1516 aa10.3□□□□□ -0.76
HPS5-205ENST00000438420 CEP164Q9UPV0 1460 aa10.27□□□□□ -0.77
HPS5-205ENST00000438420 NCAPD3P42695 1498 aa10.26□□□□□ -0.77
HPS5-205ENST00000438420 SYNJ1O43426 1573 aa10.24□□□□□ -0.77
HPS5-205ENST00000438420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.23□□□□□ -0.77
HPS5-205ENST00000438420 HMGXB3Q12766 1538 aa10.23□□□□□ -0.77
HPS5-205ENST00000438420 DNAJC5Q9H3Z4 198 aa10.22□□□□□ -0.77
HPS5-205ENST00000438420 CLIP1P30622 1438 aa10.22□□□□□ -0.77
HPS5-205ENST00000438420 KIF27Q86VH2 1401 aa10.17□□□□□ -0.78
HPS5-205ENST00000438420 HNRNPUL2Q1KMD3 747 aaKnown RBP10.17□□□□□ -0.78
HPS5-205ENST00000438420 RAPGEF2Q9Y4G8 1499 aa10.15□□□□□ -0.78
HPS5-205ENST00000438420 TOP2BQ02880 1626 aa10.14□□□□□ -0.79
HPS5-205ENST00000438420 CADPSQ9ULU8 1353 aa10.13□□□□□ -0.79
HPS5-205ENST00000438420 CFTRP13569 1480 aa10.13□□□□□ -0.79
HPS5-205ENST00000438420 KIF21BO75037 1637 aa10.13□□□□□ -0.79
HPS5-205ENST00000438420 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
HPS5-205ENST00000438420 AMER1Q5JTC6 1135 aaPredicted RBP10.09□□□□□ -0.79
HPS5-205ENST00000438420 VPS8Q8N3P4 1428 aa10.09□□□□□ -0.79
HPS5-205ENST00000438420 CUX2O14529 1486 aa10.09□□□□□ -0.79
HPS5-205ENST00000438420 CUX1P39880 1505 aa10.09□□□□□ -0.79
HPS5-205ENST00000438420 CC2D2AQ9P2K1 1620 aa10.09□□□□□ -0.79
HPS5-205ENST00000438420 BIVM-ERCC5R4GMW8 1640 aa10.06□□□□□ -0.8
HPS5-205ENST00000438420 FANCD2Q9BXW9 1451 aa10.03□□□□□ -0.8
HPS5-205ENST00000438420 ITGAEP38570 1179 aa10.02□□□□□ -0.81
HPS5-205ENST00000438420 ADRA2BP18089 450 aa10.02□□□□□ -0.81
HPS5-205ENST00000438420 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.81
HPS5-205ENST00000438420 P3H3Q8IVL6 736 aa10.01□□□□□ -0.81
HPS5-205ENST00000438420 CARMIL1Q5VZK9 1371 aa10.01□□□□□ -0.81
HPS5-205ENST00000438420 FGD5Q6ZNL6 1462 aa10.01□□□□□ -0.81
HPS5-205ENST00000438420 PRXQ9BXM0 1461 aa10.01□□□□□ -0.81
HPS5-205ENST00000438420 IGF1RP08069 1367 aa9.97□□□□□ -0.81
HPS5-205ENST00000438420 NESP48681 1621 aa9.96□□□□□ -0.81
HPS5-205ENST00000438420 KANK4Q5T7N3 995 aaPredicted RBP9.93□□□□□ -0.82
HPS5-205ENST00000438420 PDS5BQ9NTI5 1447 aa9.93□□□□□ -0.82
HPS5-205ENST00000438420 RAD54L2Q9Y4B4 1467 aa9.93□□□□□ -0.82
HPS5-205ENST00000438420 ARAP1Q96P48 1450 aa9.93□□□□□ -0.82
HPS5-205ENST00000438420 FAM50AQ14320 339 aaKnown RBP9.92□□□□□ -0.82
HPS5-205ENST00000438420 DAXXQ9UER7 740 aaPredicted RBP9.92□□□□□ -0.82
HPS5-205ENST00000438420 DIEXFQ68CQ4 756 aaKnown RBP9.92□□□□□ -0.82
HPS5-205ENST00000438420 PRDM2Q13029 1718 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms