RNA–Protein interactions for RNA: ENST00000357555.9

FGFR2-205, Transcript of fibroblast growth factor receptor 2, human

TSL 2 BASIC

Gene FGFR2, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-205	ENST00000357555	NISCH	Q9Y2I1	1504 aa		13.25	□□□□□ -0.29
FGFR2-205	ENST00000357555	DCAF8L2	P0C7V8	631 aa		12.76	□□□□□ -0.37
FGFR2-205	ENST00000357555	SHROOM4	Q9ULL8	1493 aa		12.05	□□□□□ -0.48
FGFR2-205	ENST00000357555	SUPT5H	O00267	1087 aa	Known RBP	11.8	□□□□□ -0.52
FGFR2-205	ENST00000357555	ABCC9	O60706	1549 aa		11.63	□□□□□ -0.55
FGFR2-205	ENST00000357555	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
FGFR2-205	ENST00000357555	EHMT2	Q96KQ7	1210 aa		11.35	□□□□□ -0.59
FGFR2-205	ENST00000357555	CCDC180	Q9P1Z9	1646 aa		11.32	□□□□□ -0.6
FGFR2-205	ENST00000357555	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.1	□□□□□ -0.63
FGFR2-205	ENST00000357555	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.1	□□□□□ -0.63
FGFR2-205	ENST00000357555	CHIC1	Q5VXU3	224 aa		10.98	□□□□□ -0.65
FGFR2-205	ENST00000357555	PCGF6	Q9BYE7	350 aa		10.95	□□□□□ -0.66
FGFR2-205	ENST00000357555	RANGAP1	P46060	587 aa	Predicted RBP	10.91	□□□□□ -0.66
FGFR2-205	ENST00000357555	SCRIB	Q14160	1630 aa		10.9	□□□□□ -0.66
FGFR2-205	ENST00000357555	MYO15B	Q96JP2	1530 aa		10.87	□□□□□ -0.67
FGFR2-205	ENST00000357555	LOC105371045	A0A1W2PR82	267 aa		10.85	□□□□□ -0.67
FGFR2-205	ENST00000357555	TRIM41	Q8WV44	630 aa		10.83	□□□□□ -0.68
FGFR2-205	ENST00000357555	DCAF1	Q9Y4B6	1507 aa		10.81	□□□□□ -0.68
FGFR2-205	ENST00000357555	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.79	□□□□□ -0.68
FGFR2-205	ENST00000357555	HRC	P23327	699 aa		10.76	□□□□□ -0.69
FGFR2-205	ENST00000357555	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.74	□□□□□ -0.69
FGFR2-205	ENST00000357555	NACAD	O15069	1562 aa		10.73	□□□□□ -0.69
FGFR2-205	ENST00000357555	RB1CC1	Q8TDY2	1594 aa		10.69	□□□□□ -0.7
FGFR2-205	ENST00000357555	UBTF	P17480	764 aa	Known RBP	10.6	□□□□□ -0.71
FGFR2-205	ENST00000357555	CECR2	Q9BXF3	1484 aa		10.6	□□□□□ -0.71
FGFR2-205	ENST00000357555	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.58	□□□□□ -0.72
FGFR2-205	ENST00000357555	TRIM26	Q12899	539 aa	Predicted RBP	10.52	□□□□□ -0.73
FGFR2-205	ENST00000357555	RSF1	Q96T23	1441 aa	Predicted RBP	10.48	□□□□□ -0.73
FGFR2-205	ENST00000357555	FBLN2	P98095	1184 aa		10.45	□□□□□ -0.74
FGFR2-205	ENST00000357555	DNAJC5B	Q9UF47	199 aa		10.41	□□□□□ -0.74
FGFR2-205	ENST00000357555	APLP2	Q06481	763 aa		10.39	□□□□□ -0.75
FGFR2-205	ENST00000357555	MROH2B	Q7Z745	1585 aa		10.37	□□□□□ -0.75
FGFR2-205	ENST00000357555	P3H3	Q8IVL6	736 aa		10.31	□□□□□ -0.76
FGFR2-205	ENST00000357555	ARID3C	A6NKF2	412 aa		10.31	□□□□□ -0.76
FGFR2-205	ENST00000357555	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.3	□□□□□ -0.76
FGFR2-205	ENST00000357555	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.3	□□□□□ -0.76
FGFR2-205	ENST00000357555	CCER1	Q8TC90	406 aa	Predicted RBP	10.28	□□□□□ -0.76
FGFR2-205	ENST00000357555	BAZ1B	Q9UIG0	1483 aa	Known RBP	10.28	□□□□□ -0.76
FGFR2-205	ENST00000357555	ZEB1	P37275	1124 aa	Predicted RBP	10.28	□□□□□ -0.76
FGFR2-205	ENST00000357555	WIZ	O95785	1651 aa		10.26	□□□□□ -0.77
FGFR2-205	ENST00000357555	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.25	□□□□□ -0.77
FGFR2-205	ENST00000357555	ITGAE	P38570	1179 aa		10.24	□□□□□ -0.77
FGFR2-205	ENST00000357555	UNC13A	Q9UPW8	1703 aa		10.21	□□□□□ -0.78
FGFR2-205	ENST00000357555	CSRNP3	Q8WYN3	585 aa		10.2	□□□□□ -0.78
FGFR2-205	ENST00000357555	BICRA	Q9NZM4	1560 aa		10.18	□□□□□ -0.78
FGFR2-205	ENST00000357555	PELP1	Q8IZL8	1130 aa	Known RBP	10.17	□□□□□ -0.78
FGFR2-205	ENST00000357555	CCDC88B	A6NC98	1476 aa		10.15	□□□□□ -0.78
FGFR2-205	ENST00000357555	ATAD2B	Q9ULI0	1458 aa		10.14	□□□□□ -0.79
FGFR2-205	ENST00000357555	SMARCA4	P51532	1647 aa		10.12	□□□□□ -0.79
FGFR2-205	ENST00000357555	ABCC8	Q09428	1581 aa		10.09	□□□□□ -0.79
FGFR2-205	ENST00000357555	ERCC6	Q03468	1493 aa		10.09	□□□□□ -0.79
FGFR2-205	ENST00000357555	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.08	□□□□□ -0.8
FGFR2-205	ENST00000357555	SMARCA2	P51531	1590 aa		10.06	□□□□□ -0.8
FGFR2-205	ENST00000357555	MYT1L	Q9UL68	1186 aa		10.06	□□□□□ -0.8
FGFR2-205	ENST00000357555	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.06	□□□□□ -0.8
FGFR2-205	ENST00000357555	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.05	□□□□□ -0.8
FGFR2-205	ENST00000357555	EIF4G1	Q04637	1599 aa	Known RBP	10.05	□□□□□ -0.8
FGFR2-205	ENST00000357555	TDRD9	Q8NDG6	1382 aa	Known RBP	10.03	□□□□□ -0.8
FGFR2-205	ENST00000357555	YTHDC1	Q96MU7	727 aa	Known RBP	10.03	□□□□□ -0.8
FGFR2-205	ENST00000357555	SOGA1	O94964	1423 aa		10.03	□□□□□ -0.8
FGFR2-205	ENST00000357555	TOP2A	P11388	1531 aa	Known RBP	10.02	□□□□□ -0.81
FGFR2-205	ENST00000357555	DIEXF	Q68CQ4	756 aa	Known RBP	10.01	□□□□□ -0.81
FGFR2-205	ENST00000357555	SCAF1	Q9H7N4	1312 aa	Known RBP	10.01	□□□□□ -0.81
FGFR2-205	ENST00000357555	NES	P48681	1621 aa		10	□□□□□ -0.81
FGFR2-205	ENST00000357555	MYT1	Q01538	1121 aa		10	□□□□□ -0.81
FGFR2-205	ENST00000357555	CADPS	Q9ULU8	1353 aa		10	□□□□□ -0.81
FGFR2-205	ENST00000357555	CEP162	Q5TB80	1403 aa		10	□□□□□ -0.81
FGFR2-205	ENST00000357555	FAM50A	Q14320	339 aa	Known RBP	9.97	□□□□□ -0.81
FGFR2-205	ENST00000357555	RUSC2	Q8N2Y8	1516 aa		9.96	□□□□□ -0.81
FGFR2-205	ENST00000357555	CC2D2A	Q9P2K1	1620 aa		9.96	□□□□□ -0.81
FGFR2-205	ENST00000357555	CENPB	P07199	599 aa	Predicted RBP	9.93	□□□□□ -0.82
FGFR2-205	ENST00000357555	ZNF777	Q9ULD5	760 aa	Predicted RBP	9.93	□□□□□ -0.82
FGFR2-205	ENST00000357555	NEUROD1	Q13562	356 aa		9.92	□□□□□ -0.82
FGFR2-205	ENST00000357555	NCAPD3	P42695	1498 aa		9.92	□□□□□ -0.82
FGFR2-205	ENST00000357555	CUX2	O14529	1486 aa		9.9	□□□□□ -0.82
FGFR2-205	ENST00000357555	PDS5B	Q9NTI5	1447 aa		9.9	□□□□□ -0.82
FGFR2-205	ENST00000357555	GTF3C3	Q9Y5Q9	886 aa		9.89	□□□□□ -0.83
FGFR2-205	ENST00000357555	TNIK	Q9UKE5	1360 aa		9.89	□□□□□ -0.83
FGFR2-205	ENST00000357555	ACIN1	Q9UKV3	1341 aa	Known RBP	9.88	□□□□□ -0.83
FGFR2-205	ENST00000357555	KCNH8	Q96L42	1107 aa		9.88	□□□□□ -0.83
FGFR2-205	ENST00000357555	SLC24A1	O60721	1099 aa		9.87	□□□□□ -0.83
FGFR2-205	ENST00000357555	FANCD2	Q9BXW9	1451 aa		9.87	□□□□□ -0.83
FGFR2-205	ENST00000357555	GOLGA3	Q08378	1498 aa		9.85	□□□□□ -0.83
FGFR2-205	ENST00000357555	ZNF316	A6NFI3	1004 aa	Predicted RBP	9.85	□□□□□ -0.83
FGFR2-205	ENST00000357555	KIF27	Q86VH2	1401 aa		9.84	□□□□□ -0.83
FGFR2-205	ENST00000357555	RAD54L2	Q9Y4B4	1467 aa		9.84	□□□□□ -0.83
FGFR2-205	ENST00000357555	CLIP1	P30622	1438 aa		9.83	□□□□□ -0.84
FGFR2-205	ENST00000357555	PLPPR3	Q6T4P5	718 aa		9.83	□□□□□ -0.84
FGFR2-205	ENST00000357555	CARMIL1	Q5VZK9	1371 aa		9.82	□□□□□ -0.84
FGFR2-205	ENST00000357555	HMGXB3	Q12766	1538 aa		9.82	□□□□□ -0.84
FGFR2-205	ENST00000357555	PEG3	Q9GZU2	1588 aa		9.82	□□□□□ -0.84
FGFR2-205	ENST00000357555	CHIC2	Q9UKJ5	165 aa		9.81	□□□□□ -0.84
FGFR2-205	ENST00000357555	EEA1	Q15075	1411 aa		9.8	□□□□□ -0.84
FGFR2-205	ENST00000357555	CEP164	Q9UPV0	1460 aa		9.8	□□□□□ -0.84
FGFR2-205	ENST00000357555	AQR	O60306	1485 aa	Known RBP eCLIP	9.79	□□□□□ -0.84
FGFR2-205	ENST00000357555	TRIM52	Q96A61	297 aa		9.78	□□□□□ -0.84
FGFR2-205	ENST00000357555	CNGB1	Q14028	1251 aa	Predicted RBP	9.78	□□□□□ -0.84
FGFR2-205	ENST00000357555	MIER1	Q8N108	512 aa		9.77	□□□□□ -0.85
FGFR2-205	ENST00000357555	NPM1	P06748	294 aa	Known RBP eCLIP	9.77	□□□□□ -0.85
FGFR2-205	ENST00000357555	SENP3	Q9H4L4	574 aa	Predicted RBP	9.75	□□□□□ -0.85

Retrieved 100 of 20,778 RNA–protein pairs in 126 ms