RNA–Protein interactions for RNA: ENST00000413059.1

MTHFD1P1-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 pseudogene 1, humanhuman

BASIC

Gene MTHFD1P1, Length 2,764 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P1-201ENST00000413059 CHIC1Q5VXU3 224 aa15.44■□□□□ 0.06
MTHFD1P1-201ENST00000413059 NISCHQ9Y2I1 1504 aa15.26■□□□□ 0.03
MTHFD1P1-201ENST00000413059 AEBP2Q6ZN18 517 aaPredicted RBP14.65□□□□□ -0.06
MTHFD1P1-201ENST00000413059 SLC24A1O60721 1099 aa14.31□□□□□ -0.12
MTHFD1P1-201ENST00000413059 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.16
MTHFD1P1-201ENST00000413059 PHF23Q9BUL5 403 aaPredicted RBP13.88□□□□□ -0.19
MTHFD1P1-201ENST00000413059 PLPPR3Q6T4P5 718 aa13.42□□□□□ -0.26
MTHFD1P1-201ENST00000413059 CCDC180Q9P1Z9 1646 aa13.41□□□□□ -0.26
MTHFD1P1-201ENST00000413059 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
MTHFD1P1-201ENST00000413059 KCNA4P22459 653 aa13.18□□□□□ -0.3
MTHFD1P1-201ENST00000413059 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
MTHFD1P1-201ENST00000413059 AMER1Q5JTC6 1135 aaPredicted RBP13□□□□□ -0.33
MTHFD1P1-201ENST00000413059 ABCC9O60706 1549 aa12.81□□□□□ -0.36
MTHFD1P1-201ENST00000413059 ZCCHC6Q5VYS8 1495 aaKnown RBP12.78□□□□□ -0.36
MTHFD1P1-201ENST00000413059 NCBP3Q53F19 620 aaKnown RBP12.75□□□□□ -0.37
MTHFD1P1-201ENST00000413059 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
MTHFD1P1-201ENST00000413059 DCAF8L2P0C7V8 631 aa12.65□□□□□ -0.38
MTHFD1P1-201ENST00000413059 DCAF1Q9Y4B6 1507 aa12.65□□□□□ -0.39
MTHFD1P1-201ENST00000413059 MYO15BQ96JP2 1530 aa12.58□□□□□ -0.4
MTHFD1P1-201ENST00000413059 DAXXQ9UER7 740 aaPredicted RBP12.57□□□□□ -0.4
MTHFD1P1-201ENST00000413059 NACADO15069 1562 aa12.55□□□□□ -0.4
MTHFD1P1-201ENST00000413059 PRKCSHP14314 528 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1P1-201ENST00000413059 RB1CC1Q8TDY2 1594 aa12.48□□□□□ -0.41
MTHFD1P1-201ENST00000413059 ADRA2BP18089 450 aa12.47□□□□□ -0.41
MTHFD1P1-201ENST00000413059 SHROOM4Q9ULL8 1493 aa12.28□□□□□ -0.44
MTHFD1P1-201ENST00000413059 SCRIBQ14160 1630 aa12.28□□□□□ -0.44
MTHFD1P1-201ENST00000413059 ZBTB22O15209 634 aa12.22□□□□□ -0.45
MTHFD1P1-201ENST00000413059 UNC13AQ9UPW8 1703 aa12.15□□□□□ -0.46
MTHFD1P1-201ENST00000413059 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.46
MTHFD1P1-201ENST00000413059 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
MTHFD1P1-201ENST00000413059 ARXQ96QS3 562 aa12.06□□□□□ -0.48
MTHFD1P1-201ENST00000413059 BICRAQ9NZM4 1560 aa12.06□□□□□ -0.48
MTHFD1P1-201ENST00000413059 BCANQ96GW7 911 aa12.06□□□□□ -0.48
MTHFD1P1-201ENST00000413059 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
MTHFD1P1-201ENST00000413059 PLCB2Q00722 1185 aa11.99□□□□□ -0.49
MTHFD1P1-201ENST00000413059 TPRNQ4KMQ1 711 aa11.97□□□□□ -0.49
MTHFD1P1-201ENST00000413059 SENP3Q9H4L4 574 aaPredicted RBP11.97□□□□□ -0.49
MTHFD1P1-201ENST00000413059 TULP1O00294 542 aaPredicted RBP11.96□□□□□ -0.49
MTHFD1P1-201ENST00000413059 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
MTHFD1P1-201ENST00000413059 PPP6R1Q9UPN7 881 aa11.85□□□□□ -0.51
MTHFD1P1-201ENST00000413059 NPM3O75607 178 aaKnown RBP11.84□□□□□ -0.51
MTHFD1P1-201ENST00000413059 CECR2Q9BXF3 1484 aa11.84□□□□□ -0.51
MTHFD1P1-201ENST00000413059 FKBP8Q14318 412 aa11.82□□□□□ -0.52
MTHFD1P1-201ENST00000413059 BAZ1AQ9NRL2 1556 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1P1-201ENST00000413059 PPP4R3CPQ6ZMV5 832 aa11.78□□□□□ -0.52
MTHFD1P1-201ENST00000413059 SMARCA4P51532 1647 aa11.77□□□□□ -0.53
MTHFD1P1-201ENST00000413059 MROH2BQ7Z745 1585 aa11.76□□□□□ -0.53
MTHFD1P1-201ENST00000413059 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
MTHFD1P1-201ENST00000413059 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
MTHFD1P1-201ENST00000413059 HOMEZQ8IX15 550 aa11.73□□□□□ -0.53
MTHFD1P1-201ENST00000413059 EIF4G1Q04637 1599 aaKnown RBP11.73□□□□□ -0.53
MTHFD1P1-201ENST00000413059 WIZO95785 1651 aa11.65□□□□□ -0.55
MTHFD1P1-201ENST00000413059 PEG3Q9GZU2 1588 aa11.64□□□□□ -0.55
MTHFD1P1-201ENST00000413059 SMARCA2P51531 1590 aa11.64□□□□□ -0.55
MTHFD1P1-201ENST00000413059 GTF3C3Q9Y5Q9 886 aa11.64□□□□□ -0.55
MTHFD1P1-201ENST00000413059 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
MTHFD1P1-201ENST00000413059 CC2D2AQ9P2K1 1620 aa11.6□□□□□ -0.55
MTHFD1P1-201ENST00000413059 RANGAP1P46060 587 aaPredicted RBP11.59□□□□□ -0.55
MTHFD1P1-201ENST00000413059 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
MTHFD1P1-201ENST00000413059 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
MTHFD1P1-201ENST00000413059 VSIG10Q8N0Z9 540 aa11.56□□□□□ -0.56
MTHFD1P1-201ENST00000413059 TOP2AP11388 1531 aaKnown RBP11.56□□□□□ -0.56
MTHFD1P1-201ENST00000413059 BAZ1BQ9UIG0 1483 aaKnown RBP11.56□□□□□ -0.56
MTHFD1P1-201ENST00000413059 HMGXB3Q12766 1538 aa11.54□□□□□ -0.56
MTHFD1P1-201ENST00000413059 KDM2AQ9Y2K7 1162 aa11.47□□□□□ -0.57
MTHFD1P1-201ENST00000413059 PODXL2Q9NZ53 605 aa11.47□□□□□ -0.57
MTHFD1P1-201ENST00000413059 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
MTHFD1P1-201ENST00000413059 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
MTHFD1P1-201ENST00000413059 FBLN2P98095 1184 aa11.4□□□□□ -0.58
MTHFD1P1-201ENST00000413059 TMEM132AQ24JP5 1023 aa11.39□□□□□ -0.59
MTHFD1P1-201ENST00000413059 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
MTHFD1P1-201ENST00000413059 APLP2Q06481 763 aa11.35□□□□□ -0.59
MTHFD1P1-201ENST00000413059 KLHL34Q8N239 644 aa11.34□□□□□ -0.59
MTHFD1P1-201ENST00000413059 C14orf37Q86TY3 774 aa11.33□□□□□ -0.6
MTHFD1P1-201ENST00000413059 CADPSQ9ULU8 1353 aa11.26□□□□□ -0.61
MTHFD1P1-201ENST00000413059 CFTRP13569 1480 aa11.25□□□□□ -0.61
MTHFD1P1-201ENST00000413059 LAMC3Q9Y6N6 1575 aa11.21□□□□□ -0.61
MTHFD1P1-201ENST00000413059 HRCP23327 699 aa11.18□□□□□ -0.62
MTHFD1P1-201ENST00000413059 NESP48681 1621 aa11.18□□□□□ -0.62
MTHFD1P1-201ENST00000413059 PRDM2Q13029 1718 aa11.17□□□□□ -0.62
MTHFD1P1-201ENST00000413059 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
MTHFD1P1-201ENST00000413059 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
MTHFD1P1-201ENST00000413059 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
MTHFD1P1-201ENST00000413059 FANCD2Q9BXW9 1451 aa11.13□□□□□ -0.63
MTHFD1P1-201ENST00000413059 FOXD1Q16676 465 aa11.11□□□□□ -0.63
MTHFD1P1-201ENST00000413059 ABCC8Q09428 1581 aa11.1□□□□□ -0.63
MTHFD1P1-201ENST00000413059 CEP164Q9UPV0 1460 aa11.09□□□□□ -0.63
MTHFD1P1-201ENST00000413059 WRNQ14191 1432 aaPredicted RBP eCLIP11.09□□□□□ -0.63
MTHFD1P1-201ENST00000413059 TTBK1Q5TCY1 1321 aaPredicted RBP11.08□□□□□ -0.64
MTHFD1P1-201ENST00000413059 PAXIP1Q6ZW49 1069 aaPredicted RBP11.08□□□□□ -0.64
MTHFD1P1-201ENST00000413059 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
MTHFD1P1-201ENST00000413059 CNKSR2Q8WXI2 1034 aa11.06□□□□□ -0.64
MTHFD1P1-201ENST00000413059 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
MTHFD1P1-201ENST00000413059 ERCC6Q03468 1493 aa11.05□□□□□ -0.64
MTHFD1P1-201ENST00000413059 KIF21AQ7Z4S6 1674 aa11.04□□□□□ -0.64
MTHFD1P1-201ENST00000413059 TRIM26Q12899 539 aaPredicted RBP11.04□□□□□ -0.64
MTHFD1P1-201ENST00000413059 SYNJ1O43426 1573 aa11.02□□□□□ -0.64
MTHFD1P1-201ENST00000413059 NBR1Q14596 966 aa11.02□□□□□ -0.64
MTHFD1P1-201ENST00000413059 CUX1P39880 1505 aa11.02□□□□□ -0.65
MTHFD1P1-201ENST00000413059 TOP2BQ02880 1626 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms