RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 CHIC1Q5VXU3 224 aa14.38□□□□□ -0.11
CDKAL1-202ENST00000378610 AEBP2Q6ZN18 517 aaPredicted RBP14.28□□□□□ -0.12
CDKAL1-202ENST00000378610 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
CDKAL1-202ENST00000378610 PHF23Q9BUL5 403 aaPredicted RBP13.04□□□□□ -0.32
CDKAL1-202ENST00000378610 EHMT2Q96KQ7 1210 aa12.96□□□□□ -0.34
CDKAL1-202ENST00000378610 NISCHQ9Y2I1 1504 aa12.64□□□□□ -0.39
CDKAL1-202ENST00000378610 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
CDKAL1-202ENST00000378610 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
CDKAL1-202ENST00000378610 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
CDKAL1-202ENST00000378610 KCNA4P22459 653 aa12.13□□□□□ -0.47
CDKAL1-202ENST00000378610 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.49
CDKAL1-202ENST00000378610 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
CDKAL1-202ENST00000378610 ADRA2BP18089 450 aa11.76□□□□□ -0.53
CDKAL1-202ENST00000378610 DAXXQ9UER7 740 aaPredicted RBP11.7□□□□□ -0.54
CDKAL1-202ENST00000378610 SLC4A1APQ9BWU0 796 aaKnown RBP11.66□□□□□ -0.54
CDKAL1-202ENST00000378610 PRKCSHP14314 528 aaPredicted RBP11.58□□□□□ -0.56
CDKAL1-202ENST00000378610 SENP3Q9H4L4 574 aaPredicted RBP11.53□□□□□ -0.56
CDKAL1-202ENST00000378610 PPP6R1Q9UPN7 881 aa11.4□□□□□ -0.59
CDKAL1-202ENST00000378610 HRCP23327 699 aa11.32□□□□□ -0.6
CDKAL1-202ENST00000378610 ZBTB22O15209 634 aa11.26□□□□□ -0.61
CDKAL1-202ENST00000378610 TAOK2Q9UL54 1235 aa11.26□□□□□ -0.61
CDKAL1-202ENST00000378610 TIMELESSQ9UNS1 1208 aa11.24□□□□□ -0.61
CDKAL1-202ENST00000378610 ARXQ96QS3 562 aa11.21□□□□□ -0.62
CDKAL1-202ENST00000378610 PELP1Q8IZL8 1130 aaKnown RBP11.16□□□□□ -0.62
CDKAL1-202ENST00000378610 BCANQ96GW7 911 aa11.15□□□□□ -0.62
CDKAL1-202ENST00000378610 PLCB2Q00722 1185 aa11.09□□□□□ -0.63
CDKAL1-202ENST00000378610 MYO15BQ96JP2 1530 aa11.08□□□□□ -0.64
CDKAL1-202ENST00000378610 TULP1O00294 542 aaPredicted RBP11.08□□□□□ -0.64
CDKAL1-202ENST00000378610 TPRNQ4KMQ1 711 aa11.07□□□□□ -0.64
CDKAL1-202ENST00000378610 DCAF1Q9Y4B6 1507 aa10.98□□□□□ -0.65
CDKAL1-202ENST00000378610 CCDC180Q9P1Z9 1646 aa10.96□□□□□ -0.65
CDKAL1-202ENST00000378610 HAP1P54257 671 aaPredicted RBP10.95□□□□□ -0.66
CDKAL1-202ENST00000378610 FOXD1Q16676 465 aa10.92□□□□□ -0.66
CDKAL1-202ENST00000378610 NPM3O75607 178 aaKnown RBP10.9□□□□□ -0.66
CDKAL1-202ENST00000378610 FKBP8Q14318 412 aa10.88□□□□□ -0.67
CDKAL1-202ENST00000378610 HOMEZQ8IX15 550 aa10.88□□□□□ -0.67
CDKAL1-202ENST00000378610 PPARGC1BQ86YN6 1023 aaKnown RBP10.85□□□□□ -0.67
CDKAL1-202ENST00000378610 PPP4R3CPQ6ZMV5 832 aa10.82□□□□□ -0.68
CDKAL1-202ENST00000378610 MYT1Q01538 1121 aa10.81□□□□□ -0.68
CDKAL1-202ENST00000378610 GTF3C3Q9Y5Q9 886 aa10.79□□□□□ -0.68
CDKAL1-202ENST00000378610 PCGF6Q9BYE7 350 aa10.78□□□□□ -0.68
CDKAL1-202ENST00000378610 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.68
CDKAL1-202ENST00000378610 RANGAP1P46060 587 aaPredicted RBP10.74□□□□□ -0.69
CDKAL1-202ENST00000378610 SCAF1Q9H7N4 1312 aaKnown RBP10.73□□□□□ -0.69
CDKAL1-202ENST00000378610 VSIG10Q8N0Z9 540 aa10.7□□□□□ -0.7
CDKAL1-202ENST00000378610 FOXD4L1Q9NU39 408 aa10.64□□□□□ -0.71
CDKAL1-202ENST00000378610 APLP2Q06481 763 aa10.63□□□□□ -0.71
CDKAL1-202ENST00000378610 SHROOM4Q9ULL8 1493 aa10.63□□□□□ -0.71
CDKAL1-202ENST00000378610 PODXL2Q9NZ53 605 aa10.63□□□□□ -0.71
CDKAL1-202ENST00000378610 KDM2AQ9Y2K7 1162 aa10.62□□□□□ -0.71
CDKAL1-202ENST00000378610 ZEB1P37275 1124 aaPredicted RBP10.6□□□□□ -0.71
CDKAL1-202ENST00000378610 TRIM26Q12899 539 aaPredicted RBP10.6□□□□□ -0.71
CDKAL1-202ENST00000378610 SUPT5HO00267 1087 aaKnown RBP10.59□□□□□ -0.71
CDKAL1-202ENST00000378610 TMEM132AQ24JP5 1023 aa10.56□□□□□ -0.72
CDKAL1-202ENST00000378610 ERICH6Q7L0X2 663 aa10.55□□□□□ -0.72
CDKAL1-202ENST00000378610 KLHL34Q8N239 644 aa10.55□□□□□ -0.72
CDKAL1-202ENST00000378610 FBLN2P98095 1184 aa10.54□□□□□ -0.72
CDKAL1-202ENST00000378610 PIAS4Q8N2W9 510 aaPredicted RBP10.52□□□□□ -0.72
CDKAL1-202ENST00000378610 C14orf37Q86TY3 774 aa10.47□□□□□ -0.73
CDKAL1-202ENST00000378610 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.74
CDKAL1-202ENST00000378610 ACIN1Q9UKV3 1341 aaKnown RBP10.44□□□□□ -0.74
CDKAL1-202ENST00000378610 TTBK1Q5TCY1 1321 aaPredicted RBP10.39□□□□□ -0.75
CDKAL1-202ENST00000378610 LOC105371045A0A1W2PR82 267 aa10.35□□□□□ -0.75
CDKAL1-202ENST00000378610 NPM2Q86SE8 214 aaKnown RBP10.35□□□□□ -0.75
CDKAL1-202ENST00000378610 NEUROD1Q13562 356 aa10.34□□□□□ -0.75
CDKAL1-202ENST00000378610 ABCC9O60706 1549 aa10.3□□□□□ -0.76
CDKAL1-202ENST00000378610 PAXIP1Q6ZW49 1069 aaPredicted RBP10.2□□□□□ -0.78
CDKAL1-202ENST00000378610 MAPK8IP2Q13387 824 aaPredicted RBP10.19□□□□□ -0.78
CDKAL1-202ENST00000378610 UBTFP17480 764 aaKnown RBP10.18□□□□□ -0.78
CDKAL1-202ENST00000378610 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
CDKAL1-202ENST00000378610 CENPBP07199 599 aaPredicted RBP10.18□□□□□ -0.78
CDKAL1-202ENST00000378610 FBXO3Q9UK99 471 aa10.17□□□□□ -0.78
CDKAL1-202ENST00000378610 NBR1Q14596 966 aa10.16□□□□□ -0.78
CDKAL1-202ENST00000378610 TSHZ2Q9NRE2 1034 aa10.15□□□□□ -0.79
CDKAL1-202ENST00000378610 TRIM41Q8WV44 630 aa10.14□□□□□ -0.79
CDKAL1-202ENST00000378610 CNKSR2Q8WXI2 1034 aa10.14□□□□□ -0.79
CDKAL1-202ENST00000378610 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.13□□□□□ -0.79
CDKAL1-202ENST00000378610 RB1CC1Q8TDY2 1594 aa10.12□□□□□ -0.79
CDKAL1-202ENST00000378610 PKD2Q13563 968 aa10.12□□□□□ -0.79
CDKAL1-202ENST00000378610 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
CDKAL1-202ENST00000378610 DIEXFQ68CQ4 756 aaKnown RBP10.09□□□□□ -0.79
CDKAL1-202ENST00000378610 NPM1P06748 294 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDKAL1-202ENST00000378610 WRNQ14191 1432 aaPredicted RBP eCLIP10.07□□□□□ -0.8
CDKAL1-202ENST00000378610 EIF4G1Q04637 1599 aaKnown RBP10.07□□□□□ -0.8
CDKAL1-202ENST00000378610 DNAJC5BQ9UF47 199 aa10.06□□□□□ -0.8
CDKAL1-202ENST00000378610 RSF1Q96T23 1441 aaPredicted RBP10.05□□□□□ -0.8
CDKAL1-202ENST00000378610 ATXN8OSP0DMR3 200 aa10.03□□□□□ -0.8
CDKAL1-202ENST00000378610 CLSPNQ9HAW4 1339 aa10□□□□□ -0.81
CDKAL1-202ENST00000378610 EIF5BO60841 1220 aaKnown RBP9.98□□□□□ -0.81
CDKAL1-202ENST00000378610 NACADO15069 1562 aa9.98□□□□□ -0.81
CDKAL1-202ENST00000378610 SLC4A2P04920 1241 aa9.96□□□□□ -0.81
CDKAL1-202ENST00000378610 IFNLR1Q8IU57 520 aaPredicted RBP9.96□□□□□ -0.81
CDKAL1-202ENST00000378610 DNAJC5Q9H3Z4 198 aa9.96□□□□□ -0.82
CDKAL1-202ENST00000378610 ZNF316A6NFI3 1004 aaPredicted RBP9.93□□□□□ -0.82
CDKAL1-202ENST00000378610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.93□□□□□ -0.82
CDKAL1-202ENST00000378610 BCL11AQ9H165 835 aa9.93□□□□□ -0.82
CDKAL1-202ENST00000378610 SPRYD3Q8NCJ5 442 aa9.93□□□□□ -0.82
CDKAL1-202ENST00000378610 VASPP50552 380 aaPredicted RBP9.91□□□□□ -0.82
CDKAL1-202ENST00000378610 ANP32EQ9BTT0 268 aa9.91□□□□□ -0.82
CDKAL1-202ENST00000378610 CCER1Q8TC90 406 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms