Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.99■□□□□ 0.63
NECTIN3Q9NQS3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.98■□□□□ 0.63
NECTIN3Q9NQS3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NECTIN3Q9NQS3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NECTIN3Q9NQS3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 HLA-B-256ENST00000639848 1089 ntBASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NECTIN3Q9NQS3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms