Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SDHCQ99643 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SDHCQ99643 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.12■□□□□ 0.33
SDHCQ99643 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHCQ99643 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SDHCQ99643 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SDHCQ99643 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.12■□□□□ 0.33
SDHCQ99643 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.12■□□□□ 0.33
SDHCQ99643 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SDHCQ99643 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.12■□□□□ 0.33
SDHCQ99643 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.12■□□□□ 0.33
SDHCQ99643 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.12■□□□□ 0.33
SDHCQ99643 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.12■□□□□ 0.33
SDHCQ99643 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SDHCQ99643 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.12■□□□□ 0.33
SDHCQ99643 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHCQ99643 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.12■□□□□ 0.33
SDHCQ99643 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SDHCQ99643 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.12■□□□□ 0.33
SDHCQ99643 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SDHCQ99643 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.12■□□□□ 0.33
SDHCQ99643 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.12■□□□□ 0.33
SDHCQ99643 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SDHCQ99643 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.12■□□□□ 0.33
SDHCQ99643 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SDHCQ99643 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SDHCQ99643 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SDHCQ99643 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.11■□□□□ 0.33
SDHCQ99643 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SDHCQ99643 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SDHCQ99643 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SDHCQ99643 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.11■□□□□ 0.33
SDHCQ99643 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SDHCQ99643 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.11■□□□□ 0.33
SDHCQ99643 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.11■□□□□ 0.33
SDHCQ99643 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.11■□□□□ 0.33
SDHCQ99643 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.11■□□□□ 0.33
SDHCQ99643 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.11■□□□□ 0.33
SDHCQ99643 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.11■□□□□ 0.33
SDHCQ99643 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SDHCQ99643 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SDHCQ99643 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SDHCQ99643 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.11■□□□□ 0.33
SDHCQ99643 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHCQ99643 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHCQ99643 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SDHCQ99643 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.1■□□□□ 0.33
SDHCQ99643 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.1■□□□□ 0.33
SDHCQ99643 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDHCQ99643 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.1■□□□□ 0.33
SDHCQ99643 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHCQ99643 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SDHCQ99643 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHCQ99643 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDHCQ99643 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHCQ99643 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.1■□□□□ 0.33
SDHCQ99643 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.1■□□□□ 0.33
SDHCQ99643 EEF1DP3-203ENST00000566025 782 ntBASIC17.1■□□□□ 0.33
SDHCQ99643 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SDHCQ99643 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.1■□□□□ 0.33
SDHCQ99643 PRORSD1P-202ENST00000563365 2154 ntBASIC17.1■□□□□ 0.33
SDHCQ99643 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SDHCQ99643 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SDHCQ99643 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHCQ99643 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHCQ99643 AC093525.10-201ENST00000625130 1569 ntBASIC17.1■□□□□ 0.33
SDHCQ99643 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.1■□□□□ 0.33
SDHCQ99643 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.1■□□□□ 0.33
SDHCQ99643 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SDHCQ99643 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.1■□□□□ 0.33
SDHCQ99643 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.09■□□□□ 0.33
SDHCQ99643 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHCQ99643 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
SDHCQ99643 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHCQ99643 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SDHCQ99643 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHCQ99643 TSPY13P-201ENST00000338964 914 ntBASIC17.09■□□□□ 0.33
SDHCQ99643 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.09■□□□□ 0.33
SDHCQ99643 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHCQ99643 SLC47A1P1-202ENST00000449666 945 ntBASIC17.09■□□□□ 0.33
SDHCQ99643 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHCQ99643 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SDHCQ99643 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SDHCQ99643 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SDHCQ99643 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHCQ99643 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SDHCQ99643 FP475955.4-201ENST00000623131 1990 ntBASIC17.09■□□□□ 0.33
SDHCQ99643 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms