Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.13■□□□□ 0.01
LINC00479Q96M42 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 LINC01465-201ENST00000408887 1940 ntBASIC15.13■□□□□ 0.01
LINC00479Q96M42 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00479Q96M42 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00479Q96M42 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.12■□□□□ 0.01
LINC00479Q96M42 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 AC005332.8-201ENST00000622750 2735 ntBASIC15.12■□□□□ 0.01
LINC00479Q96M42 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00479Q96M42 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00479Q96M42 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00479Q96M42 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00479Q96M42 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LINC00479Q96M42 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00479Q96M42 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms