Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NCLNQ969V3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NCLNQ969V3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NCLNQ969V3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NCLNQ969V3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.19■□□□□ 0.66
NCLNQ969V3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.19■□□□□ 0.66
NCLNQ969V3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.19■□□□□ 0.66
NCLNQ969V3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLNQ969V3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLNQ969V3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
NCLNQ969V3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLNQ969V3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NCLNQ969V3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.18■□□□□ 0.66
NCLNQ969V3 AC010980.2-201ENST00000587099 1412 ntBASIC19.18■□□□□ 0.66
NCLNQ969V3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.18■□□□□ 0.66
NCLNQ969V3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLNQ969V3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCLNQ969V3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NCLNQ969V3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.18■□□□□ 0.66
NCLNQ969V3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.18■□□□□ 0.66
NCLNQ969V3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.18■□□□□ 0.66
NCLNQ969V3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.18■□□□□ 0.66
NCLNQ969V3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.18■□□□□ 0.66
NCLNQ969V3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLNQ969V3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLNQ969V3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.18■□□□□ 0.66
NCLNQ969V3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.18■□□□□ 0.66
NCLNQ969V3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLNQ969V3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NCLNQ969V3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.18■□□□□ 0.66
NCLNQ969V3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.17■□□□□ 0.66
NCLNQ969V3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCLNQ969V3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NCLNQ969V3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCLNQ969V3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.17■□□□□ 0.66
NCLNQ969V3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NCLNQ969V3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCLNQ969V3 AL138781.1-201ENST00000566567 1274 ntBASIC19.17■□□□□ 0.66
NCLNQ969V3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.17■□□□□ 0.66
NCLNQ969V3 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.17■□□□□ 0.66
NCLNQ969V3 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.17■□□□□ 0.66
NCLNQ969V3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLNQ969V3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLNQ969V3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCLNQ969V3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLNQ969V3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NCLNQ969V3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLNQ969V3 AC020763.4-201ENST00000623414 4170 ntBASIC19.17■□□□□ 0.66
NCLNQ969V3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLNQ969V3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.17■□□□□ 0.66
NCLNQ969V3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NCLNQ969V3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NCLNQ969V3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NCLNQ969V3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
NCLNQ969V3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.16■□□□□ 0.66
NCLNQ969V3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NCLNQ969V3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.16■□□□□ 0.66
NCLNQ969V3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.16■□□□□ 0.66
NCLNQ969V3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.16■□□□□ 0.66
NCLNQ969V3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.16■□□□□ 0.66
NCLNQ969V3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.16■□□□□ 0.66
NCLNQ969V3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.16■□□□□ 0.66
NCLNQ969V3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.16■□□□□ 0.66
NCLNQ969V3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NCLNQ969V3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NCLNQ969V3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NCLNQ969V3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLNQ969V3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLNQ969V3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.15■□□□□ 0.66
NCLNQ969V3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLNQ969V3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NCLNQ969V3 SMG8-203ENST00000578922 2178 ntBASIC19.15■□□□□ 0.66
NCLNQ969V3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NCLNQ969V3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLNQ969V3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NCLNQ969V3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLNQ969V3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NCLNQ969V3 MIPEPP3-201ENST00000412105 444 ntBASIC19.15■□□□□ 0.66
NCLNQ969V3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.15■□□□□ 0.66
NCLNQ969V3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NCLNQ969V3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.15■□□□□ 0.66
NCLNQ969V3 AC142086.2-201ENST00000569753 217 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms