Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RNF34Q969K3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF34Q969K3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF34Q969K3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF34Q969K3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF34Q969K3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF34Q969K3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RNF34Q969K3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF34Q969K3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF34Q969K3 AL162377.1-201ENST00000618844 1793 ntBASIC20.74■□□□□ 0.91
RNF34Q969K3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF34Q969K3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF34Q969K3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF34Q969K3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF34Q969K3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF34Q969K3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF34Q969K3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF34Q969K3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF34Q969K3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF34Q969K3 POU5F1P3-201ENST00000428824 1078 ntBASIC20.74■□□□□ 0.91
RNF34Q969K3 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF34Q969K3 AC120498.8-201ENST00000614275 531 ntBASIC20.74■□□□□ 0.91
RNF34Q969K3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF34Q969K3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RNF34Q969K3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF34Q969K3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF34Q969K3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
RNF34Q969K3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF34Q969K3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF34Q969K3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF34Q969K3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF34Q969K3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
RNF34Q969K3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF34Q969K3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RNF34Q969K3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RNF34Q969K3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
RNF34Q969K3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RNF34Q969K3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 KRT17P3-201ENST00000420566 1262 ntBASIC20.73■□□□□ 0.91
RNF34Q969K3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF34Q969K3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF34Q969K3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF34Q969K3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF34Q969K3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF34Q969K3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
RNF34Q969K3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF34Q969K3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RNF34Q969K3 BX119927.1-201ENST00000636596 1552 ntBASIC20.72■□□□□ 0.91
RNF34Q969K3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.72■□□□□ 0.91
RNF34Q969K3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 ABHD17AP1-201ENST00000358206 933 ntBASIC20.72■□□□□ 0.91
RNF34Q969K3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.72■□□□□ 0.91
RNF34Q969K3 RPS2P52-201ENST00000469610 820 ntBASIC20.72■□□□□ 0.91
RNF34Q969K3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 AC008403.3-201ENST00000598924 454 ntBASIC20.72■□□□□ 0.91
RNF34Q969K3 AC006058.3-201ENST00000606217 1069 ntBASIC20.72■□□□□ 0.91
RNF34Q969K3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.72■□□□□ 0.91
RNF34Q969K3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RNF34Q969K3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF34Q969K3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF34Q969K3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RNF34Q969K3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF34Q969K3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF34Q969K3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RNF34Q969K3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms