Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SVIPQ8NHG7 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 AC131902.2-201ENST00000566892 2172 ntBASIC12.53□□□□□ -0.4
SVIPQ8NHG7 AKR1C8P-201ENST00000578467 2182 ntTSL 2 BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.53□□□□□ -0.4
SVIPQ8NHG7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 AL390961.4-201ENST00000623958 2535 ntBASIC12.52□□□□□ -0.4
SVIPQ8NHG7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
SVIPQ8NHG7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SVIPQ8NHG7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC12.51□□□□□ -0.41
SVIPQ8NHG7 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SVIPQ8NHG7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SVIPQ8NHG7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SVIPQ8NHG7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms