Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.55■□□□□ 0.72
SNX31Q8N9S9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX31Q8N9S9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX31Q8N9S9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX31Q8N9S9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX31Q8N9S9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX31Q8N9S9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX31Q8N9S9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SNX31Q8N9S9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SNX31Q8N9S9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 AC093787.1-201ENST00000450396 207 ntBASIC19.53■□□□□ 0.72
SNX31Q8N9S9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNX31Q8N9S9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 AC010980.2-201ENST00000587099 1412 ntBASIC19.52■□□□□ 0.72
SNX31Q8N9S9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
SNX31Q8N9S9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
SNX31Q8N9S9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNX31Q8N9S9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.52■□□□□ 0.71
SNX31Q8N9S9 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SNX31Q8N9S9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.52■□□□□ 0.71
SNX31Q8N9S9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNX31Q8N9S9 AL020996.1-203ENST00000536896 2307 ntBASIC19.51■□□□□ 0.71
SNX31Q8N9S9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms