Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFCAB3Q8N7B9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
EFCAB3Q8N7B9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFCAB3Q8N7B9 AC073210.2-201ENST00000430369 194 ntBASIC19.62■□□□□ 0.73
EFCAB3Q8N7B9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.62■□□□□ 0.73
EFCAB3Q8N7B9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.62■□□□□ 0.73
EFCAB3Q8N7B9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFCAB3Q8N7B9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EFCAB3Q8N7B9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.62■□□□□ 0.73
EFCAB3Q8N7B9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EFCAB3Q8N7B9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.62■□□□□ 0.73
EFCAB3Q8N7B9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 RBM17P2-201ENST00000616397 1405 ntBASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.61■□□□□ 0.73
EFCAB3Q8N7B9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 RNA5SP413-201ENST00000516373 109 ntBASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 MIR4758-201ENST00000577688 71 ntBASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 ITM2C-210ENST00000620962 501 ntBASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
EFCAB3Q8N7B9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 AC010536.3-201ENST00000620306 533 ntBASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.59■□□□□ 0.73
EFCAB3Q8N7B9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFCAB3Q8N7B9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFCAB3Q8N7B9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFCAB3Q8N7B9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
EFCAB3Q8N7B9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
EFCAB3Q8N7B9 BX323043.1-201ENST00000641006 1765 ntBASIC19.58■□□□□ 0.73
EFCAB3Q8N7B9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFCAB3Q8N7B9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.58■□□□□ 0.73
EFCAB3Q8N7B9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
EFCAB3Q8N7B9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms