Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.11■□□□□ 0.17
LINC00311Q8N616 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
LINC00311Q8N616 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LINC00311Q8N616 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LINC00311Q8N616 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00311Q8N616 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00311Q8N616 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00311Q8N616 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 TFP1-202ENST00000475455 1573 ntBASIC16.09■□□□□ 0.17
LINC00311Q8N616 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 AC125437.2-201ENST00000625180 2167 ntBASIC16.09■□□□□ 0.17
LINC00311Q8N616 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 RPS2P52-201ENST00000469610 820 ntBASIC16.09■□□□□ 0.17
LINC00311Q8N616 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 AC120498.8-201ENST00000614275 531 ntBASIC16.09■□□□□ 0.17
LINC00311Q8N616 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LINC00311Q8N616 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00311Q8N616 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00311Q8N616 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00311Q8N616 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LINC00311Q8N616 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00311Q8N616 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00311Q8N616 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LINC00311Q8N616 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00311Q8N616 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.08■□□□□ 0.16
LINC00311Q8N616 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
LINC00311Q8N616 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00311Q8N616 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00311Q8N616 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00311Q8N616 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.08■□□□□ 0.16
LINC00311Q8N616 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LINC00311Q8N616 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.08■□□□□ 0.16
LINC00311Q8N616 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.08■□□□□ 0.16
LINC00311Q8N616 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.08■□□□□ 0.16
LINC00311Q8N616 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.08■□□□□ 0.16
LINC00311Q8N616 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.08■□□□□ 0.16
LINC00311Q8N616 PCDHAC2-203ENST00000615316 3011 ntBASIC16.08■□□□□ 0.16
LINC00311Q8N616 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LINC00311Q8N616 AFG3L1P-217ENST00000557444 2447 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms