Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTCHD4Q6ZW05 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 AC007322.3-201ENST00000426526 701 ntBASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 UBE2DNL-204ENST00000602536 740 ntBASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PTCHD4Q6ZW05 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PTCHD4Q6ZW05 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 Z82202.1-201ENST00000623446 1880 ntBASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PTCHD4Q6ZW05 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms