Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 AC006557.6-201ENST00000623071 864 ntBASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 AC018553.1-201ENST00000616682 1458 ntBASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COLCA1Q6ZS62 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COLCA1Q6ZS62 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 TFP1-202ENST00000475455 1573 ntBASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 TREX1-205ENST00000625293 1783 ntBASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COLCA1Q6ZS62 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
COLCA1Q6ZS62 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
COLCA1Q6ZS62 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COLCA1Q6ZS62 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
COLCA1Q6ZS62 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COLCA1Q6ZS62 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.08■□□□□ 0.33
COLCA1Q6ZS62 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 RPS2P52-201ENST00000469610 820 ntBASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms