Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 AC007322.1-201ENST00000426983 750 ntBASIC20.21■□□□□ 0.83
CASC4Q6P4E1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 AC231657.2-201ENST00000624556 255 ntBASIC20.21■□□□□ 0.83
CASC4Q6P4E1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASC4Q6P4E1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.2■□□□□ 0.82
CASC4Q6P4E1 PTBP1P-201ENST00000554374 1601 ntBASIC20.2■□□□□ 0.82
CASC4Q6P4E1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 KRT8P17-201ENST00000453110 1448 ntBASIC20.19■□□□□ 0.82
CASC4Q6P4E1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 AC116562.4-201ENST00000641316 2276 ntBASIC20.19■□□□□ 0.82
CASC4Q6P4E1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 AL355472.2-201ENST00000422958 438 ntBASIC20.19■□□□□ 0.82
CASC4Q6P4E1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASC4Q6P4E1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.18■□□□□ 0.82
CASC4Q6P4E1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.18■□□□□ 0.82
CASC4Q6P4E1 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.18■□□□□ 0.82
CASC4Q6P4E1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CASC4Q6P4E1 CYP2T3P-201ENST00000601990 817 ntBASIC20.18■□□□□ 0.82
CASC4Q6P4E1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CASC4Q6P4E1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CASC4Q6P4E1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CASC4Q6P4E1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CASC4Q6P4E1 KRT16P6-202ENST00000425692 1426 ntBASIC20.18■□□□□ 0.82
CASC4Q6P4E1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
CASC4Q6P4E1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CASC4Q6P4E1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CASC4Q6P4E1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CASC4Q6P4E1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASC4Q6P4E1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms