Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 MICAL1-206ENST00000465904 4381 ntTSL 211.59□□□□□ -0.554e-7■■□□□ 12.7
LSM11P83369 MICAL1-205ENST00000456101 4112 ntTSL 211.16□□□□□ -0.624e-7■■□□□ 12.7
LSM11P83369 ABCA7-216ENST00000532194 1151 ntTSL 311.16□□□□□ -0.624e-7■■□□□ 12.7
LSM11P83369 IST1-213ENST00000538565 1245 ntTSL 29.46□□□□□ -0.94e-10■■□□□ 12.7
LSM11P83369 DCXR-217ENST00000582613 617 ntTSL 222.38■■□□□ 1.172e-11■■□□□ 12.7
LSM11P83369 DCXR-220ENST00000585085 927 ntTSL 520.7■□□□□ 0.92e-11■■□□□ 12.7
LSM11P83369 DCXR-221ENST00000585164 475 ntTSL 519.31■□□□□ 0.682e-11■■□□□ 12.7
LSM11P83369 DCXR-209ENST00000579155 430 ntTSL 515.78■□□□□ 0.122e-11■■□□□ 12.7
LSM11P83369 DCXR-204ENST00000577712 429 ntTSL 513.79□□□□□ -0.22e-11■■□□□ 12.7
LSM11P83369 DCXR-219ENST00000584318 284 ntTSL 513.04□□□□□ -0.322e-11■■□□□ 12.7
LSM11P83369 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.312e-6■■□□□ 12.7
LSM11P83369 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.342e-6■■□□□ 12.7
LSM11P83369 COL9A3-204ENST00000463487 760 ntTSL 517.48■□□□□ 0.391e-7■■□□□ 12.7
LSM11P83369 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.285e-6■■□□□ 12.7
LSM11P83369 IVNS1ABP-204ENST00000459929 3657 ntTSL 512.09□□□□□ -0.475e-6■■□□□ 12.7
LSM11P83369 IVNS1ABP-206ENST00000475046 1816 ntTSL 26.92□□□□□ -1.35e-6■■□□□ 12.7
LSM11P83369 IVNS1ABP-207ENST00000480769 3776 ntTSL 1 (best)5.22□□□□□ -1.575e-6■■□□□ 12.7
LSM11P83369 SRRM2-228ENST00000576878 1141 ntTSL 215.46■□□□□ 0.075e-71■■□□□ 12.7
LSM11P83369 SRRM2-220ENST00000574593 1440 ntTSL 313.69□□□□□ -0.225e-71■■□□□ 12.7
LSM11P83369 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC11.96□□□□□ -0.492e-6■■□□□ 12.7
LSM11P83369 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.332e-6■■□□□ 12.7
LSM11P83369 FANCA-226ENST00000567879 713 ntAPPRIS ALT2 TSL 311.86□□□□□ -0.514e-7■■□□□ 12.7
LSM11P83369 MST1-201ENST00000448220 667 ntTSL 510.78□□□□□ -0.682e-8■■□□□ 12.7
LSM11P83369 PLCG1-216ENST00000608885 865 ntTSL 57.36□□□□□ -1.237e-9■■□□□ 12.7
LSM11P83369 TMC6-222ENST00000592076 693 ntTSL 314.11□□□□□ -0.157e-11■■□□□ 12.7
LSM11P83369 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.785e-8■■□□□ 12.7
LSM11P83369 ERBB3-201ENST00000267101 5919 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.835e-8■■□□□ 12.7
LSM11P83369 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC8.9□□□□□ -0.995e-8■■□□□ 12.7
LSM11P83369 TRAF7-206ENST00000569686 586 ntTSL 222.74■■□□□ 1.234e-6■■□□□ 12.7
LSM11P83369 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.17■□□□□ 0.824e-6■■□□□ 12.7
LSM11P83369 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.59■□□□□ 0.734e-6■■□□□ 12.7
LSM11P83369 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.731e-11■■□□□ 12.7
LSM11P83369 ZNF580-206ENST00000592881 1019 ntTSL 318.4■□□□□ 0.544e-6■■□□□ 12.7
LSM11P83369 SCYL1-209ENST00000528545 981 ntTSL 517.94■□□□□ 0.464e-6■■□□□ 12.7
LSM11P83369 SCYL1-213ENST00000532290 856 nt17.94■□□□□ 0.464e-6■■□□□ 12.7
LSM11P83369 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.3■□□□□ 0.364e-6■■□□□ 12.7
LSM11P83369 NSUN5P2-202ENST00000444583 1180 ntTSL 1 (best)16.96■□□□□ 0.319e-8■■□□□ 12.7
LSM11P83369 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.84■□□□□ 0.294e-6■■□□□ 12.7
LSM11P83369 BAHCC1-204ENST00000583828 591 ntTSL 316.42■□□□□ 0.224e-6■■□□□ 12.7
LSM11P83369 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.18■□□□□ 0.189e-8■■□□□ 12.7
LSM11P83369 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.16■□□□□ 0.183e-7■■□□□ 12.7
LSM11P83369 SCYL1-215ENST00000534462 579 ntTSL 316■□□□□ 0.154e-6■■□□□ 12.7
LSM11P83369 TRAF7-202ENST00000564067 874 ntTSL 315.76■□□□□ 0.114e-6■■□□□ 12.7
LSM11P83369 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.76■□□□□ 0.114e-6■■□□□ 12.7
LSM11P83369 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.65■□□□□ 0.19e-8■■□□□ 12.7
LSM11P83369 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.53■□□□□ 0.084e-6■■□□□ 12.7
LSM11P83369 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.27■□□□□ 0.034e-6■■□□□ 12.7
LSM11P83369 NSUN5P2-204ENST00000485741 1647 ntTSL 1 (best)15.1■□□□□ 0.019e-8■■□□□ 12.7
LSM11P83369 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.014e-6■■□□□ 12.7
LSM11P83369 SSBP4-213ENST00000602088 622 ntTSL 514.65□□□□□ -0.064e-6■■□□□ 12.7
LSM11P83369 ATP6V0A1-207ENST00000585828 2139 ntTSL 1 (best)14.48□□□□□ -0.098e-8■■□□□ 12.7
LSM11P83369 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.14e-6■■□□□ 12.7
LSM11P83369 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.24□□□□□ -0.134e-6■■□□□ 12.7
LSM11P83369 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.144e-6■■□□□ 12.7
LSM11P83369 ATP6V0A1-214ENST00000587797 1878 ntTSL 214.12□□□□□ -0.158e-8■■□□□ 12.7
LSM11P83369 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.24e-6■■□□□ 12.7
LSM11P83369 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.51□□□□□ -0.254e-6■■□□□ 12.7
LSM11P83369 TMEM222-207ENST00000478104 986 ntTSL 312.84□□□□□ -0.354e-6■■□□□ 12.7
LSM11P83369 GATD1-214ENST00000532839 559 ntTSL 1 (best)11.86□□□□□ -0.514e-6■■□□□ 12.7
LSM11P83369 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.584e-6■■□□□ 12.7
LSM11P83369 ATP6V0A1-205ENST00000544137 3047 ntTSL 1 (best) BASIC10.84□□□□□ -0.678e-8■■□□□ 12.7
LSM11P83369 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.764e-6■■□□□ 12.7
LSM11P83369 ATP6V0A1-225ENST00000592831 4652 nt8.83□□□□□ -18e-8■■□□□ 12.7
LSM11P83369 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -18e-8■■□□□ 12.7
LSM11P83369 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.018e-8■■□□□ 12.7
LSM11P83369 AL390195.1-201ENST00000445680 415 ntTSL 38.34□□□□□ -1.074e-6■■□□□ 12.7
LSM11P83369 WDR77-202ENST00000449340 877 ntTSL 58.1□□□□□ -1.114e-6■■□□□ 12.7
LSM11P83369 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC6.55□□□□□ -1.364e-6■■□□□ 12.7
LSM11P83369 VARS-222ENST00000470953 392 ntTSL 35.22□□□□□ -1.571e-8■■□□□ 12.7
LSM11P83369 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.063e-7■■□□□ 12.7
LSM11P83369 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.513e-7■■□□□ 12.7
LSM11P83369 MTG1-204ENST00000473735 2212 ntTSL 520.04■□□□□ 0.81e-8■■□□□ 12.7
LSM11P83369 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.231e-8■■□□□ 12.7
LSM11P83369 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.61■□□□□ 0.091e-8■■□□□ 12.7
LSM11P83369 MST1-208ENST00000484144 878 ntTSL 215.9■□□□□ 0.143e-8■■□□□ 12.6
LSM11P83369 MST1-204ENST00000479115 2285 ntTSL 520.19■□□□□ 0.822e-8■■□□□ 12.6
LSM11P83369 MST1-215ENST00000492329 2006 ntTSL 517.45■□□□□ 0.382e-8■■□□□ 12.6
LSM11P83369 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.242e-8■■□□□ 12.6
LSM11P83369 MST1-211ENST00000488350 4152 ntTSL 513.1□□□□□ -0.312e-8■■□□□ 12.6
LSM11P83369 MST1-217ENST00000493836 923 ntTSL 212.27□□□□□ -0.452e-8■■□□□ 12.6
LSM11P83369 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.431e-6■■□□□ 12.6
LSM11P83369 EEF1A1-205ENST00000455918 701 ntTSL 217.43■□□□□ 0.381e-6■■□□□ 12.6
LSM11P83369 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.191e-6■■□□□ 12.6
LSM11P83369 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.811e-6■■□□□ 12.6
LSM11P83369 EEF1A1-204ENST00000356303 635 ntTSL 27.85□□□□□ -1.151e-6■■□□□ 12.6
LSM11P83369 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.93□□□□□ -1.621e-6■■□□□ 12.6
LSM11P83369 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.26□□□□□ -1.731e-6■■□□□ 12.6
LSM11P83369 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.71■■□□□ 1.238e-7■■□□□ 12.6
LSM11P83369 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.75■■□□□ 1.078e-7■■□□□ 12.6
LSM11P83369 UBALD1-204ENST00000588691 281 ntTSL 321.22■□□□□ 0.998e-7■■□□□ 12.6
LSM11P83369 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.12■□□□□ 0.818e-7■■□□□ 12.6
LSM11P83369 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.748e-7■■□□□ 12.6
LSM11P83369 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.25■□□□□ 0.678e-7■■□□□ 12.6
LSM11P83369 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.1■□□□□ 0.338e-7■■□□□ 12.6
LSM11P83369 COL9A3-207ENST00000467819 993 ntTSL 1 (best)18.35■□□□□ 0.538e-10■■□□□ 12.6
LSM11P83369 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.837e-8■■□□□ 12.6
LSM11P83369 CENPX-203ENST00000577379 861 ntTSL 519.69■□□□□ 0.747e-8■■□□□ 12.6
LSM11P83369 CENPX-205ENST00000580090 752 ntTSL 216.39■□□□□ 0.217e-8■■□□□ 12.6
LSM11P83369 CENPX-209ENST00000584514 882 ntTSL 216.34■□□□□ 0.217e-8■■□□□ 12.6
LSM11P83369 CENPX-207ENST00000583767 894 ntTSL 316.25■□□□□ 0.197e-8■■□□□ 12.6
Retrieved 100 of 11,495 protein–RNA pairs in 75.4 ms